MGE detailed information
MGE type: Prophage MGE length: 51112 bp
Accession: NZ_LT996889 Location: 2604107..2655218 Organism: Staphylococcus aureus isolate 24117-REV Replicon: chromosome
Accession: NZ_LT996889 Location: 2604107..2655218 Organism: Staphylococcus aureus isolate 24117-REV Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DYY93_RS13440 () | 2599276..2600007 | + | 732 | WP_000273371.1 | segregation/condensation protein A | - |
| DYY93_RS13445 () | 2600000..2600542 | + | 543 | WP_000368654.1 | SMC-Scp complex subunit ScpB | - |
| DYY93_RS13450 () | 2600535..2601272 | + | 738 | WP_000159577.1 | rRNA pseudouridine synthase | - |
| DYY93_RS13455 () | 2601405..2602130 | + | 726 | WP_000064078.1 | two-component system response regulator SrrA | - |
| DYY93_RS13460 () | 2602111..2603862 | + | 1752 | WP_000987769.1 | two-component system sensor histidine kinase SrrB | - |
| DYY93_RS13465 () | 2604107..2605015 | + | 909 | WP_001641538.1 | DUF1672 domain-containing protein | - |
| DYY93_RS13470 () | 2605027..2607054 | + | 2028 | WP_001793477.1 | hypothetical protein | - |
| DYY93_RS13475 () | 2607097..2608302 | - | 1206 | WP_000264751.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| DYY93_RS13480 () | 2608428..2609042 | + | 615 | WP_000191464.1 | hypothetical protein | - |
| DYY93_RS13485 () | 2609039..2609185 | - | 147 | WP_001795334.1 | hypothetical protein | - |
| DYY93_RS13490 () | 2609274..2609669 | - | 396 | WP_000449655.1 | hypothetical protein | - |
| DYY93_RS13495 () | 2609698..2610132 | - | 435 | WP_115657847.1 | hypothetical protein | - |
| DYY93_RS13500 () | 2610150..2610611 | - | 462 | WP_000525004.1 | hypothetical protein | Toxin Detail |
| DYY93_RS13505 () | 2610624..2610938 | - | 315 | WP_000333630.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| DYY93_RS13510 () | 2611090..2611326 | + | 237 | WP_001121027.1 | helix-turn-helix domain-containing protein | - |
| DYY93_RS13515 () | 2611340..2612116 | + | 777 | WP_001148544.1 | Rha family transcriptional regulator | - |
| DYY93_RS13520 () | 2612145..2612288 | + | 144 | WP_000939498.1 | hypothetical protein | - |
| DYY93_RS13525 () | 2612278..2612487 | - | 210 | WP_000642492.1 | hypothetical protein | - |
| DYY93_RS13530 () | 2612543..2612788 | + | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| DYY93_RS13535 () | 2612757..2613122 | - | 366 | WP_001128433.1 | hypothetical protein | - |
| DYY93_RS13540 () | 2613177..2613392 | + | 216 | WP_001097552.1 | hypothetical protein | - |
| DYY93_RS13545 () | 2613419..2613682 | + | 264 | WP_001124198.1 | helix-turn-helix domain-containing protein | - |
| DYY93_RS13550 () | 2613695..2613856 | + | 162 | WP_001285948.1 | DUF1270 domain-containing protein | - |
| DYY93_RS13555 () | 2613935..2614258 | + | 324 | WP_000174994.1 | hypothetical protein | - |
| DYY93_RS13560 () | 2614273..2614635 | + | 363 | WP_000985976.1 | hypothetical protein | - |
| DYY93_RS13565 () | 2614632..2615798 | + | 1167 | WP_000762545.1 | DUF2800 domain-containing protein | - |
| DYY93_RS13570 () | 2615824..2616381 | + | 558 | WP_000645042.1 | DUF2815 family protein | - |
| DYY93_RS13575 () | 2616449..2618401 | + | 1953 | WP_001802096.1 | DNA polymerase | - |
| DYY93_RS13580 () | 2618414..2618599 | + | 186 | WP_001164629.1 | DUF3113 family protein | - |
| DYY93_RS13585 () | 2618599..2619000 | + | 402 | WP_000113974.1 | PVL family protein | - |
| DYY93_RS13590 () | 2619000..2619257 | + | 258 | WP_000022728.1 | DUF3310 domain-containing protein | - |
| DYY93_RS13595 () | 2619260..2619460 | + | 201 | WP_000235324.1 | hypothetical protein | - |
| DYY93_RS13600 () | 2619475..2619717 | + | 243 | WP_000132194.1 | hypothetical protein | - |
| DYY93_RS13605 () | 2619732..2619986 | + | 255 | WP_031865245.1 | DUF1024 family protein | - |
| DYY93_RS13610 () | 2619973..2620143 | + | 171 | WP_031865246.1 | hypothetical protein | - |
| DYY93_RS13615 () | 2620136..2620663 | + | 528 | WP_031865247.1 | dUTP pyrophosphatase | - |
| DYY93_RS13620 () | 2620700..2620873 | + | 174 | WP_001209217.1 | hypothetical protein | - |
| DYY93_RS13625 () | 2620890..2621177 | + | 288 | WP_033856914.1 | DUF1381 domain-containing protein | - |
| DYY93_RS13630 () | 2621170..2621406 | + | 237 | WP_000608281.1 | hypothetical protein | - |
| DYY93_RS13635 () | 2621396..2621785 | + | 390 | WP_001568228.1 | hypothetical protein | - |
| DYY93_RS13640 () | 2621782..2621934 | + | 153 | WP_031764091.1 | transcriptional activator RinB | - |
| DYY93_RS13645 () | 2622002..2622202 | + | 201 | WP_031910532.1 | DUF1514 family protein | - |
| DYY93_RS13650 () | 2622254..2624701 | + | 2448 | WP_031809042.1 | virulence-associated E family protein | - |
| DYY93_RS13655 () | 2624810..2624908 | - | 99 | WP_001801650.1 | hypothetical protein | - |
| DYY93_RS13660 () | 2625042..2625332 | + | 291 | WP_000665205.1 | VRR-NUC domain-containing protein | - |
| DYY93_RS13665 () | 2625313..2626680 | + | 1368 | WP_115657848.1 | DEAD/DEAH box helicase | - |
| DYY93_RS13670 () | 2626693..2627130 | + | 438 | WP_000513704.1 | transcriptional regulator | - |
| DYY93_RS13675 () | 2627291..2627611 | + | 321 | WP_000166257.1 | HNH endonuclease | - |
| DYY93_RS13680 () | 2627737..2628042 | + | 306 | WP_020444673.1 | P27 family phage terminase small subunit | - |
| DYY93_RS13685 () | 2628032..2629723 | + | 1692 | WP_031765982.1 | terminase large subunit | - |
| DYY93_RS13690 () | 2629728..2630966 | + | 1239 | WP_115657849.1 | phage portal protein | - |
| DYY93_RS13695 () | 2630950..2631723 | + | 774 | WP_031927476.1 | Clp protease ClpP | - |
| DYY93_RS13700 () | 2631735..2632898 | + | 1164 | WP_115657850.1 | phage major capsid protein | - |
| DYY93_RS13705 () | 2632967..2633245 | + | 279 | WP_000050975.1 | head-tail connector protein | - |
| DYY93_RS13710 () | 2633257..2633589 | + | 333 | WP_000395501.1 | hypothetical protein | - |
| DYY93_RS13715 () | 2633586..2633987 | + | 402 | WP_000110020.1 | hypothetical protein | - |
| DYY93_RS13720 () | 2633988..2634383 | + | 396 | WP_001023802.1 | DUF3168 domain-containing protein | - |
| DYY93_RS13725 () | 2634418..2635059 | + | 642 | WP_000807541.1 | tail protein | - |
| DYY93_RS13730 () | 2635151..2635606 | + | 456 | WP_000169127.1 | Ig domain-containing protein | - |
| DYY93_RS13735 () | 2635664..2636014 | + | 351 | WP_000589167.1 | hypothetical protein | - |
| DYY93_RS13740 () | 2636056..2636214 | + | 159 | WP_000438833.1 | hypothetical protein | - |
| DYY93_RS13745 () | 2636228..2642428 | + | 6201 | WP_001003424.1 | phage tail tape measure protein | - |
| DYY93_RS13750 () | 2642428..2643252 | + | 825 | WP_001190533.1 | phage tail family protein | - |
| DYY93_RS13755 () | 2643261..2644844 | + | 1584 | WP_000384474.1 | prophage endopeptidase tail family protein | - |
| DYY93_RS13760 () | 2644844..2645134 | + | 291 | WP_000179858.1 | hypothetical protein | - |
| DYY93_RS13765 () | 2645150..2647060 | + | 1911 | WP_000429558.1 | minor structural protein | - |
| DYY93_RS13770 () | 2647060..2648526 | + | 1467 | WP_000067127.1 | BppU family phage baseplate upper protein | - |
| DYY93_RS13775 () | 2648526..2648915 | + | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| DYY93_RS13780 () | 2648908..2649072 | + | 165 | WP_000916020.1 | XkdX family protein | - |
| DYY93_RS13785 () | 2649118..2649417 | + | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| DYY93_RS13790 () | 2649553..2649855 | + | 303 | WP_000339146.1 | phage holin | - |
| DYY93_RS13795 () | 2649866..2651320 | + | 1455 | WP_000909213.1 | N-acetylmuramoyl-L-alanine amidase | - |
| DYY93_RS13810 () | 2652043..2652258 | + | 216 | WP_000126130.1 | hypothetical protein | - |
| DYY93_RS13815 () | 2652349..2653254 | + | 906 | WP_000476867.1 | DUF1672 domain-containing protein | - |
| DYY93_RS13820 () | 2653312..2654229 | + | 918 | WP_000476338.1 | DUF1672 domain-containing protein | - |
| DYY93_RS13825 () | 2654286..2655218 | + | 933 | WP_000476341.1 | DUF1672 domain-containing protein | - |
| DYY93_RS13830 () | 2655620..2656165 | + | 546 | WP_001186912.1 | ECF transporter S component | - |
| DYY93_RS13835 () | 2656271..2656519 | - | 249 | WP_001151997.1 | ferredoxin | - |
| DYY93_RS13840 () | 2656627..2657580 | + | 954 | WP_001163805.1 | helix-turn-helix domain-containing protein | - |
| DYY93_RS13845 () | 2657570..2658949 | + | 1380 | WP_000902122.1 | ATP-dependent DNA helicase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|