MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 134388 bp
Accession: NZ_LT992490 Location: 2315752..2450139 Organism: Vibrio cholerae strain 4295STDY6534200 Replicon: chromosome
Accession: NZ_LT992490 Location: 2315752..2450139 Organism: Vibrio cholerae strain 4295STDY6534200 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUW69_RS10320 () | 2310791..2311120 | + | 330 | WP_000700175.1 | ribosome-associated translation inhibitor RaiA | - |
| HUW69_RS10325 () | 2311367..2312542 | + | 1176 | WP_029628517.1 | prephenate dehydratase | - |
| HUW69_RS10330 () | 2312726..2313760 | + | 1035 | WP_174566549.1 | spermidine/putrescine ABC transporter substrate-binding protein | - |
| HUW69_RS10335 () | 2313744..2316119 | + | 2376 | WP_000773118.1 | GGDEF and EAL domain-containing protein | - |
| HUW69_RS10340 () | 2316067..2316591 | + | 525 | WP_001226224.1 | inosine/xanthosine triphosphatase | - |
| HUW69_RS10345 () | 2316669..2316980 | - | 312 | WP_029628515.1 | trp operon repressor | - |
| HUW69_RS10350 () | 2317035..2318981 | - | 1947 | WP_000128414.1 | murein transglycosylase | - |
| HUW69_RS10355 () | 2319343..2321010 | + | 1668 | WP_029628514.1 | energy-dependent translational throttle protein EttA | - |
| HUW69_RS10360 () | 2321181..2321552 | + | 372 | WP_000570784.1 | PilZ domain-containing protein | - |
| HUW69_RS10365 () | 2321613..2322740 | - | 1128 | WP_000257622.1 | T-protein | VF |
| HUW69_RS10370 () | 2322762..2323835 | - | 1074 | WP_108315751.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| HUW69_RS10375 () | 2324076..2325752 | + | 1677 | WP_000364244.1 | Sensor histidine kinase BtsS | VF |
| HUW69_RS10380 () | 2325762..2326475 | + | 714 | WP_000947378.1 | Transcriptional regulatory protein BtsR | VF |
| HUW69_RS10385 () | 2326502..2327494 | - | 993 | WP_029628512.1 | beta-N-acetylhexosaminidase | - |
| HUW69_RS10390 () | 2327600..2328712 | + | 1113 | WP_029628511.1 | anhydro-N-acetylmuramic acid kinase | - |
| HUW69_RS10395 () | 2328730..2329653 | + | 924 | WP_029628510.1 | N-acetylmuramic acid 6-phosphate etherase | - |
| HUW69_RS10400 () | 2329696..2330037 | - | 342 | WP_000759195.1 | DUF2799 domain-containing protein | - |
| HUW69_RS10405 () | 2330273..2331757 | + | 1485 | WP_000964327.1 | carbon starvation protein A | - |
| HUW69_RS10410 () | 2331894..2332856 | - | 963 | WP_001893330.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| HUW69_RS10415 () | 2332891..2333325 | - | 435 | WP_001068088.1 | FKBP-type peptidyl-prolyl cis-trans isomerase | - |
| HUW69_RS10420 () | 2333488..2334003 | - | 516 | WP_029628509.1 | Lipoprotein signal peptidase | VF |
| HUW69_RS10425 () | 2334019..2336868 | - | 2850 | WP_029628508.1 | isoleucine--tRNA ligase | - |
| HUW69_RS10430 () | 2336899..2337867 | - | 969 | WP_029628507.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| HUW69_RS10435 () | 2337936..2339498 | - | 1563 | WP_174566550.1 | murein biosynthesis integral membrane protein MurJ | - |
| HUW69_RS10440 () | 2339756..2340016 | + | 261 | WP_000002742.1 | 30S ribosomal protein S20 | - |
| HUW69_RS10445 () | 2340147..2341469 | + | 1323 | WP_084998374.1 | IS4 family transposase ISIlo1 | Transposase |
| HUW69_RS10450 () | 2341521..2341823 | - | 303 | WP_001053149.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| HUW69_RS10455 () | 2342047..2342937 | - | 891 | WP_000018879.1 | Transcriptional activator protein NhaR | VF |
| HUW69_RS10460 () | 2343332..2344480 | + | 1149 | WP_000632613.1 | Na/Pi cotransporter family protein | - |
| HUW69_RS10465 () | 2344569..2345420 | - | 852 | WP_029628506.1 | thymidylate synthase | - |
| HUW69_RS10470 () | 2345430..2346245 | - | 816 | WP_029628505.1 | prolipoprotein diacylglyceryl transferase | - |
| HUW69_RS10475 () | 2346274..2347068 | - | 795 | WP_029628504.1 | sulfite exporter TauE/SafE family protein | - |
| HUW69_RS10480 () | 2347078..2349324 | - | 2247 | WP_029628503.1 | phosphoenolpyruvate--protein phosphotransferase | - |
| HUW69_RS10485 () | 2349327..2349845 | - | 519 | WP_001971555.1 | RNA pyrophosphohydrolase | - |
| HUW69_RS10490 () | 2350476..2351141 | + | 666 | WP_029628502.1 | DNA mismatch repair endonuclease MutH | - |
| HUW69_RS10495 () | 2351358..2352392 | + | 1035 | WP_029628501.1 | NADP(H)-dependent aldo-keto reductase | - |
| HUW69_RS10500 () | 2352430..2352681 | - | 252 | WP_029628500.1 | hypothetical protein | - |
| HUW69_RS10505 () | 2353259..2354593 | - | 1335 | WP_000107102.1 | Transcriptional regulatory protein ZraR | VF |
| HUW69_RS10510 () | 2354867..2356399 | - | 1533 | WP_000128766.1 | lysine--tRNA ligase | - |
| HUW69_RS10520 () | 2357698..2359011 | - | 1314 | WP_000815024.1 | branched-chain amino acid transport system II carrier protein | - |
| HUW69_RS10525 () | 2359320..2360042 | + | 723 | WP_174566551.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| HUW69_RS10530 () | 2360130..2361401 | + | 1272 | WP_000597952.1 | ATP-dependent RNA helicase SrmB | - |
| HUW69_RS10535 () | 2361523..2363112 | - | 1590 | WP_000013191.1 | peptide chain release factor 3 | - |
| HUW69_RS10540 () | 2363369..2364016 | - | 648 | WP_174566552.1 | LexA family transcriptional regulator | - |
| HUW69_RS10545 () | 2364134..2364385 | + | 252 | WP_000451746.1 | helix-turn-helix domain-containing protein | - |
| HUW69_RS10550 () | 2364441..2365310 | + | 870 | WP_025515463.1 | hypothetical protein | - |
| HUW69_RS10555 () | 2365351..2365959 | + | 609 | WP_001918295.1 | hypothetical protein | - |
| HUW69_RS10560 () | 2365946..2366494 | + | 549 | WP_000848909.1 | lytic transglycosylase domain-containing protein | - |
| HUW69_RS10565 () | 2366491..2366790 | + | 300 | WP_000210563.1 | flagellar transcriptional regulator FlhD | - |
| HUW69_RS10570 () | 2366787..2367320 | + | 534 | WP_165564681.1 | transcriptional regulator | - |
| HUW69_RS10575 () | 2367378..2367809 | + | 432 | WP_029628495.1 | hypothetical protein | - |
| HUW69_RS10580 () | 2367842..2371411 | - | 3570 | WP_148496381.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| HUW69_RS10585 () | 2371415..2372803 | - | 1389 | WP_123161606.1 | conjugal transfer protein TraH | - |
| HUW69_RS10590 () | 2372806..2373750 | - | 945 | WP_084998238.1 | thioredoxin family protein | - |
| HUW69_RS10595 () | 2374479..2378285 | + | 3807 | WP_174566553.1 | response regulator | - |
| HUW69_RS10600 () | 2378291..2379220 | + | 930 | WP_156845730.1 | Response regulator PleD | VF |
| HUW69_RS10605 () | 2379483..2380190 | - | 708 | WP_156845729.1 | hypothetical protein | - |
| HUW69_RS10610 () | 2380280..2381353 | - | 1074 | WP_174566554.1 | toprim domain-containing protein | - |
| HUW69_RS10615 () | 2381445..2381786 | - | 342 | WP_174566555.1 | plasmid-related protein | - |
| HUW69_RS10620 () | 2381786..2382283 | - | 498 | WP_174566556.1 | DNA repair protein RadC | - |
| HUW69_RS10625 () | 2382367..2384022 | - | 1656 | WP_174566557.1 | VWA domain-containing protein | - |
| HUW69_RS10630 () | 2384092..2384532 | - | 441 | WP_029628708.1 | hypothetical protein | - |
| HUW69_RS10635 () | 2384594..2385547 | - | 954 | WP_029628707.1 | DUF3150 domain-containing protein | - |
| HUW69_RS10640 () | 2385646..2386413 | - | 768 | WP_000970191.1 | hypothetical protein | - |
| HUW69_RS10645 () | 2386413..2387372 | - | 960 | WP_174566558.1 | CbbQ/NirQ/NorQ C-terminal domain-containing protein | - |
| HUW69_RS10650 () | 2387582..2388598 | - | 1017 | WP_109247975.1 | YqaJ viral recombinase family protein | - |
| HUW69_RS10655 () | 2388659..2388802 | - | 144 | WP_000167275.1 | hypothetical protein | - |
| HUW69_RS10660 () | 2388884..2389702 | - | 819 | WP_174566559.1 | phage recombination protein Bet | - |
| HUW69_RS10665 () | 2389782..2390201 | - | 420 | WP_174566560.1 | single-stranded DNA-binding protein | - |
| HUW69_RS10670 () | 2390217..2390543 | - | 327 | WP_029628702.1 | hypothetical protein | - |
| HUW69_RS10675 () | 2390911..2391513 | + | 603 | WP_174566561.1 | hypothetical protein | - |
| HUW69_RS10680 () | 2391790..2394522 | - | 2733 | WP_174566562.1 | SIR2 family protein | - |
| HUW69_RS10685 () | 2395020..2395454 | - | 435 | WP_060533749.1 | hypothetical protein | - |
| HUW69_RS10690 () | 2395523..2396056 | - | 534 | WP_113620033.1 | hypothetical protein | - |
| HUW69_RS10695 () | 2396059..2397039 | - | 981 | WP_113620034.1 | WYL domain-containing transcriptional regulator | - |
| HUW69_RS10700 () | 2397504..2398364 | + | 861 | WP_113620035.1 | hypothetical protein | - |
| HUW69_RS10705 () | 2398703..2399845 | - | 1143 | WP_113620036.1 | glycerate kinase | - |
| HUW69_RS10710 () | 2400059..2401384 | - | 1326 | WP_039985577.1 | 6-phospho-alpha-glucosidase | - |
| HUW69_RS10715 () | 2401450..2403036 | - | 1587 | WP_113620037.1 | PTS transporter subunit EIIC | - |
| HUW69_RS10720 () | 2403271..2404005 | + | 735 | WP_078926586.1 | GntR family transcriptional regulator | - |
| HUW69_RS10725 () | 2404442..2408134 | - | 3693 | WP_174566563.1 | conjugal transfer protein TraN | - |
| HUW69_RS10730 () | 2408137..2409165 | - | 1029 | WP_174566564.1 | TraU family protein | - |
| HUW69_RS10735 () | 2409149..2410273 | - | 1125 | WP_148496390.1 | pilus assembly protein | - |
| HUW69_RS10740 () | 2410284..2410796 | - | 513 | WP_029627980.1 | S26 family signal peptidase | - |
| HUW69_RS10745 () | 2410780..2411127 | - | 348 | WP_029627979.1 | hypothetical protein | - |
| HUW69_RS10750 () | 2411120..2413519 | - | 2400 | WP_024008831.1 | type IV secretion system protein TraC | - |
| HUW69_RS10755 () | 2413519..2414211 | - | 693 | WP_024008832.1 | DsbC family protein | - |
| HUW69_RS10760 () | 2414553..2415491 | + | 939 | WP_029627976.1 | Abi family protein | - |
| HUW69_RS10765 () | 2415917..2416453 | + | 537 | WP_029627975.1 | hypothetical protein | - |
| HUW69_RS10770 () | 2416631..2416897 | + | 267 | WP_032481064.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| HUW69_RS10775 () | 2416888..2417394 | + | 507 | WP_029627974.1 | GNAT family N-acetyltransferase | Toxin Detail |
| HUW69_RS10780 () | 2417435..2417821 | - | 387 | WP_029627973.1 | hypothetical protein | - |
| HUW69_RS10785 () | 2417818..2418390 | - | 573 | WP_001944091.1 | type IV conjugative transfer system lipoprotein TraV | - |
| HUW69_RS10790 () | 2418465..2419754 | - | 1290 | WP_029627971.1 | TraB/VirB10 family protein | - |
| HUW69_RS10795 () | 2419757..2420653 | - | 897 | WP_032471966.1 | type-F conjugative transfer system secretin TraK | - |
| HUW69_RS10800 () | 2420637..2421263 | - | 627 | WP_029627969.1 | pilus assembly protein | - |
| HUW69_RS10805 () | 2421260..2421541 | - | 282 | WP_000433889.1 | type IV conjugative transfer system protein TraL | - |
| HUW69_RS10810 () | 2421774..2422070 | + | 297 | WP_054104212.1 | HigA family addiction module antidote protein | - |
| HUW69_RS10815 () | 2422266..2423372 | - | 1107 | WP_084998261.1 | Fic family protein | - |
| HUW69_RS10820 () | 2423510..2424145 | - | 636 | WP_029627967.1 | DUF4400 domain-containing protein | - |
| HUW69_RS10825 () | 2424132..2424692 | - | 561 | WP_029627966.1 | hypothetical protein | - |
| HUW69_RS10830 () | 2424702..2426537 | - | 1836 | WP_084998262.1 | conjugative transfer system coupling protein TraD | - |
| HUW69_RS10835 () | 2426586..2428736 | - | 2151 | WP_029627964.1 | TraI domain-containing protein | - |
| HUW69_RS10840 () | 2428831..2429685 | - | 855 | WP_029627963.1 | restriction endonuclease | - |
| HUW69_RS10845 () | 2429745..2432858 | - | 3114 | WP_084998264.1 | type I restriction endonuclease subunit R | - |
| HUW69_RS10850 () | 2432922..2433923 | - | 1002 | WP_054104205.1 | Fic family protein | - |
| HUW69_RS19145 () | 2434012..2434743 | - | 732 | WP_197744817.1 | restriction endonuclease subunit S | - |
| HUW69_RS19150 () | 2434969..2435292 | - | 324 | Protein_2104 | restriction endonuclease subunit S | - |
| HUW69_RS10860 () | 2435289..2436848 | - | 1560 | WP_084998267.1 | type I restriction-modification system subunit M | - |
| HUW69_RS10865 () | 2436918..2437871 | - | 954 | WP_084998269.1 | WYL domain-containing protein | - |
| HUW69_RS10870 () | 2438189..2438488 | - | 300 | WP_174566565.1 | hypothetical protein | - |
| HUW69_RS10875 () | 2438702..2439607 | - | 906 | WP_174566566.1 | DNA polymerase III subunit epsilon | - |
| HUW69_RS10880 () | 2439991..2440248 | - | 258 | WP_118119287.1 | hypothetical protein | - |
| HUW69_RS10885 () | 2440247..2440696 | + | 450 | WP_174566567.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HUW69_RS10890 () | 2440704..2441972 | + | 1269 | WP_118119289.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| HUW69_RS10895 () | 2441983..2442426 | - | 444 | WP_174566568.1 | hypothetical protein | - |
| HUW69_RS10900 () | 2442891..2443865 | + | 975 | WP_032479291.1 | ParM/StbA family protein | - |
| HUW69_RS10905 () | 2443868..2444137 | + | 270 | WP_032479292.1 | hypothetical protein | - |
| HUW69_RS10910 () | 2444139..2445380 | + | 1242 | WP_025441390.1 | Prophage integrase IntS ; Integrase | Integrase |
| HUW69_RS10915 () | 2445397..2445591 | - | 195 | WP_000127614.1 | DNA-binding protein | - |
| HUW69_RS10920 () | 2445809..2447038 | - | 1230 | WP_148505694.1 | Serine/threonine-protein kinase toxin HipA | VF |
| HUW69_RS10925 () | 2447031..2447351 | - | 321 | WP_000122829.1 | helix-turn-helix transcriptional regulator | - |
| HUW69_RS10930 () | 2448419..2450476 | + | 2058 | WP_174566569.1 | EAL domain-containing protein | - |
| HUW69_RS10935 () | 2450465..2450914 | - | 450 | WP_000214234.1 | ribosomal protein S18-alanine N-acetyltransferase | - |
| HUW69_RS10940 () | 2450911..2451318 | - | 408 | WP_000953209.1 | DNA polymerase III subunit psi | - |
| HUW69_RS10945 () | 2451429..2451932 | - | 504 | WP_000908543.1 | N-acetyltransferase | - |
| HUW69_RS10950 () | 2451916..2452443 | - | 528 | WP_000932671.1 | SCP2 domain-containing protein | - |
| HUW69_RS10955 () | 2452676..2454730 | + | 2055 | WP_001111417.1 | bifunctional diguanylate cyclase/phosphodiesterase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|