MGE detailed information
MGE type: Prophage MGE length: 45390 bp
Accession: NZ_LT992477 Location: 1317604..1362993 Organism: Staphylococcus aureus isolate 22_LA_562 Replicon: chromosome
Accession: NZ_LT992477 Location: 1317604..1362993 Organism: Staphylococcus aureus isolate 22_LA_562 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXE38_RS06670 () | 1313205..1313537 | - | 333 | WP_000731878.1 | glycine cleavage system protein H | - |
| DXE38_RS06675 () | 1313571..1314572 | - | 1002 | WP_000240067.1 | LLM class flavin-dependent oxidoreductase | - |
| DXE38_RS06680 () | 1314686..1314778 | - | 93 | WP_014936975.1 | hypothetical protein | - |
| DXE38_RS06685 () | 1314874..1316088 | + | 1215 | WP_000286472.1 | NADH-dependent flavin oxidoreductase | - |
| DXE38_RS06690 () | 1316146..1316973 | + | 828 | WP_000136026.1 | alpha/beta hydrolase | - |
| DXE38_RS06700 () | 1317604..1318020 | - | 417 | WP_043854724.1 | hypothetical protein | - |
| DXE38_RS06705 () | 1317992..1318519 | - | 528 | WP_000455172.1 | DUF4065 domain-containing protein | - |
| DXE38_RS06710 () | 1318541..1318720 | - | 180 | WP_000201920.1 | hypothetical protein | - |
| DXE38_RS06725 () | 1319415..1320869 | - | 1455 | WP_000930261.1 | N-acetylmuramoyl-L-alanine amidase | - |
| DXE38_RS06730 () | 1320881..1321183 | - | 303 | WP_000339142.1 | phage holin | - |
| DXE38_RS06735 () | 1321319..1321618 | - | 300 | WP_000466775.1 | DUF2951 family protein | - |
| DXE38_RS06740 () | 1321664..1321828 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| DXE38_RS06745 () | 1321821..1322210 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| DXE38_RS06750 () | 1322210..1323676 | - | 1467 | WP_031775920.1 | BppU family phage baseplate upper protein | - |
| DXE38_RS06755 () | 1323676..1325586 | - | 1911 | WP_000429558.1 | minor structural protein | - |
| DXE38_RS06760 () | 1325602..1325892 | - | 291 | WP_000179858.1 | hypothetical protein | - |
| DXE38_RS06765 () | 1325892..1327475 | - | 1584 | WP_000384474.1 | prophage endopeptidase tail family protein | - |
| DXE38_RS06770 () | 1327484..1328308 | - | 825 | WP_001190533.1 | phage tail family protein | - |
| DXE38_RS06775 () | 1328308..1334508 | - | 6201 | WP_031903370.1 | phage tail tape measure protein | - |
| DXE38_RS06780 () | 1334522..1334680 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| DXE38_RS06785 () | 1334722..1335072 | - | 351 | WP_000589165.1 | hypothetical protein | - |
| DXE38_RS06790 () | 1335130..1335585 | - | 456 | WP_031775895.1 | Ig domain-containing protein | - |
| DXE38_RS06795 () | 1335677..1336318 | - | 642 | WP_000807536.1 | tail protein | - |
| DXE38_RS06800 () | 1336353..1336748 | - | 396 | WP_031863976.1 | DUF3168 domain-containing protein | - |
| DXE38_RS06805 () | 1336749..1337150 | - | 402 | WP_000110023.1 | hypothetical protein | - |
| DXE38_RS06810 () | 1337147..1337478 | - | 332 | Protein_1264 | hypothetical protein | - |
| DXE38_RS06815 () | 1337490..1337768 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| DXE38_RS06820 () | 1337837..1339000 | - | 1164 | WP_031775802.1 | phage major capsid protein | - |
| DXE38_RS06825 () | 1339012..1339785 | - | 774 | WP_000061862.1 | Clp protease ClpP | - |
| DXE38_RS06830 () | 1339769..1341007 | - | 1239 | WP_001100664.1 | phage portal protein | - |
| DXE38_RS06835 () | 1341012..1342703 | - | 1692 | WP_000153540.1 | terminase large subunit | - |
| DXE38_RS06840 () | 1342693..1342998 | - | 306 | WP_000778933.1 | P27 family phage terminase small subunit | - |
| DXE38_RS06845 () | 1343109..1343423 | - | 315 | WP_015986203.1 | HNH endonuclease | - |
| DXE38_RS06850 () | 1343580..1344017 | - | 438 | WP_015986202.1 | hypothetical protein | - |
| DXE38_RS06855 () | 1344030..1345397 | - | 1368 | WP_074370994.1 | DEAD/DEAH box helicase | - |
| DXE38_RS06860 () | 1345378..1345668 | - | 291 | WP_001794602.1 | VRR-NUC domain-containing protein | - |
| DXE38_RS06865 () | 1345802..1345900 | + | 99 | WP_001801650.1 | hypothetical protein | - |
| DXE38_RS06870 () | 1346009..1348456 | - | 2448 | WP_031776080.1 | virulence-associated E family protein | - |
| DXE38_RS06875 () | 1348508..1348708 | - | 201 | WP_031776081.1 | DUF1514 family protein | - |
| DXE38_RS06880 () | 1348776..1348928 | - | 153 | WP_016187444.1 | hypothetical protein | - |
| DXE38_RS06885 () | 1348925..1349314 | - | 390 | WP_174220665.1 | hypothetical protein | - |
| DXE38_RS06890 () | 1349467..1349814 | - | 348 | WP_000979209.1 | hypothetical protein | - |
| DXE38_RS06895 () | 1349811..1350212 | - | 402 | WP_000695759.1 | hypothetical protein | - |
| DXE38_RS06900 () | 1350215..1350421 | - | 207 | WP_000693989.1 | hypothetical protein | - |
| DXE38_RS06905 () | 1350435..1350683 | - | 249 | WP_031775942.1 | phage protein | - |
| DXE38_RS06910 () | 1350683..1350937 | - | 255 | WP_001649862.1 | DUF3310 domain-containing protein | - |
| DXE38_RS06915 () | 1350937..1351338 | - | 402 | WP_000113974.1 | PVL family protein | - |
| DXE38_RS06920 () | 1351317..1351523 | - | 207 | WP_031775910.1 | DUF3113 family protein | - |
| DXE38_RS06925 () | 1351536..1353488 | - | 1953 | WP_078067909.1 | DNA polymerase | - |
| DXE38_RS06930 () | 1353557..1354114 | - | 558 | WP_000645049.1 | DUF2815 family protein | - |
| DXE38_RS06935 () | 1354141..1355307 | - | 1167 | WP_031920737.1 | DUF2800 domain-containing protein | - |
| DXE38_RS06940 () | 1355304..1355666 | - | 363 | WP_000985976.1 | hypothetical protein | - |
| DXE38_RS06945 () | 1355681..1356004 | - | 324 | WP_000174994.1 | hypothetical protein | - |
| DXE38_RS06950 () | 1356083..1356244 | - | 162 | WP_001285948.1 | DUF1270 domain-containing protein | - |
| DXE38_RS06955 () | 1356257..1356520 | - | 264 | WP_016187436.1 | helix-turn-helix domain-containing protein | - |
| DXE38_RS06960 () | 1356545..1356760 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| DXE38_RS06965 () | 1356816..1357025 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| DXE38_RS06970 () | 1357015..1357158 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| DXE38_RS06975 () | 1357225..1357605 | + | 381 | WP_000773059.1 | DUF2513 domain-containing protein | - |
| DXE38_RS06980 () | 1357592..1357789 | - | 198 | WP_001148860.1 | hypothetical protein | - |
| DXE38_RS06985 () | 1357859..1358071 | + | 213 | WP_000362644.1 | hypothetical protein | - |
| DXE38_RS14960 () | 1358112..1358261 | - | 150 | WP_000771849.1 | hypothetical protein | - |
| DXE38_RS06990 () | 1358276..1358719 | - | 444 | WP_000435362.1 | hypothetical protein | - |
| DXE38_RS06995 () | 1358732..1358980 | - | 249 | WP_000272859.1 | helix-turn-helix domain-containing protein | - |
| DXE38_RS07000 () | 1359144..1359467 | + | 324 | WP_001260487.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| DXE38_RS07005 () | 1359480..1359941 | + | 462 | WP_031910436.1 | toxin | Toxin Detail |
| DXE38_RS07010 () | 1359959..1360393 | + | 435 | WP_031910435.1 | hypothetical protein | - |
| DXE38_RS07015 () | 1360422..1360817 | + | 396 | WP_000449655.1 | hypothetical protein | - |
| DXE38_RS07020 () | 1360905..1361051 | + | 147 | WP_078067907.1 | hypothetical protein | - |
| DXE38_RS07025 () | 1361048..1361662 | - | 615 | WP_000191459.1 | hypothetical protein | - |
| DXE38_RS07030 () | 1361788..1362993 | + | 1206 | WP_031794994.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| DXE38_RS07035 () | 1363087..1365021 | - | 1935 | Protein_1310 | YSIRK domain-containing triacylglycerol lipase Lip2/Geh | - |
| DXE38_RS07040 () | 1365438..1366751 | + | 1314 | WP_001077706.1 | YjiH family protein | - |
| DXE38_RS07045 () | 1366881..1367549 | - | 669 | WP_000936721.1 | N-acetylmannosamine-6-phosphate 2-epimerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|