MGE detailed information
MGE type: Prophage MGE length: 50500 bp
Accession: NZ_LT992464 Location: 535602..586101 Organism: Staphylococcus aureus isolate 3_LA_115 Replicon: chromosome
Accession: NZ_LT992464 Location: 535602..586101 Organism: Staphylococcus aureus isolate 3_LA_115 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXE56_RS02835 () | 530763..530897 | + | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
| DXE56_RS02840 () | 531499..532284 | - | 786 | WP_000867947.1 | carbon-nitrogen family hydrolase | - |
| DXE56_RS02845 () | 532592..533218 | - | 627 | WP_000522384.1 | nitroreductase family protein | - |
| DXE56_RS02850 () | 533415..534659 | + | 1245 | WP_000119492.1 | hypothetical protein | - |
| DXE56_RS02855 () | 534684..535427 | - | 744 | WP_000197638.1 | CPBP family intramembrane metalloprotease | - |
| DXE56_RS02860 () | 535602..535886 | + | 285 | WP_000917289.1 | co-chaperone GroES | - |
| DXE56_RS02865 () | 535962..537578 | + | 1617 | WP_000240642.1 | 60 kDa chaperonin | VF |
| DXE56_RS02870 () | 538119..538298 | + | 180 | WP_000201398.1 | hypothetical protein | - |
| DXE56_RS15035 () | 538295..538921 | + | 627 | WP_000216896.1 | hypothetical protein | - |
| DXE56_RS02890 () | 539460..540767 | - | 1308 | WP_001045074.1 | potassium transporter KtrB | - |
| DXE56_RS02900 () | 541150..542373 | - | 1224 | WP_000206618.1 | ArgE/DapE family deacylase | - |
| DXE56_RS02905 () | 542805..543860 | + | 1056 | WP_000791397.1 | putative leukocidin-like protein 2 | VF |
| DXE56_RS02910 () | 543882..544898 | + | 1017 | WP_000595612.1 | putative leukocidin-like protein 1 | VF |
| DXE56_RS02915 () | 545160..545990 | - | 831 | Protein_535 | Phospholipase C | VF |
| DXE56_RS02920 () | 546041..547078 | - | 1038 | WP_001814397.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| DXE56_RS02925 () | 547271..547975 | - | 705 | WP_000440838.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| DXE56_RS02930 () | 548115..548282 | - | 168 | WP_000705238.1 | hypothetical protein | - |
| DXE56_RS02935 () | 548438..549136 | - | 699 | WP_000837517.1 | potassium channel family protein | - |
| DXE56_RS02945 () | 549318..549950 | - | 633 | WP_031763806.1 | XRE family transcriptional regulator | - |
| DXE56_RS02950 () | 550104..550331 | + | 228 | WP_000192116.1 | ISNCY family transposase ISH7A | Transposase |
| DXE56_RS02955 () | 550354..551142 | + | 789 | WP_031763800.1 | phage antirepressor KilAC domain-containing protein | - |
| DXE56_RS02960 () | 551159..551356 | + | 198 | WP_061651380.1 | hypothetical protein | - |
| DXE56_RS02965 () | 551387..551527 | + | 141 | WP_000939496.1 | hypothetical protein | - |
| DXE56_RS02970 () | 551542..552174 | - | 633 | WP_000275058.1 | hypothetical protein | - |
| DXE56_RS02975 () | 552233..552553 | + | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| DXE56_RS02980 () | 552550..552711 | + | 162 | WP_000066017.1 | DUF1270 domain-containing protein | - |
| DXE56_RS02985 () | 552806..553132 | + | 327 | WP_000165375.1 | DUF2482 family protein | - |
| DXE56_RS02990 () | 553113..553373 | + | 261 | WP_000291503.1 | DUF1108 family protein | - |
| DXE56_RS02995 () | 553382..553645 | + | 264 | WP_001205732.1 | hypothetical protein | - |
| DXE56_RS03000 () | 553654..555597 | + | 1944 | WP_000700577.1 | AAA family ATPase | - |
| DXE56_RS03005 () | 555599..556519 | + | 921 | WP_000138475.1 | recombinase RecT | - |
| DXE56_RS03010 () | 556648..557217 | + | 570 | WP_072399433.1 | MBL fold metallo-hydrolase | - |
| DXE56_RS03015 () | 557218..557688 | + | 471 | WP_000934770.1 | single-stranded DNA-binding protein | - |
| DXE56_RS03020 () | 557718..558602 | + | 885 | WP_000148301.1 | DnaD domain protein | - |
| DXE56_RS03025 () | 558609..558827 | + | 219 | WP_000338530.1 | hypothetical protein | - |
| DXE56_RS03030 () | 558836..559240 | + | 405 | WP_000401960.1 | RusA family crossover junction endodeoxyribonuclease | - |
| DXE56_RS03035 () | 559253..559621 | + | 369 | WP_114621361.1 | hypothetical protein | - |
| DXE56_RS03040 () | 559625..559756 | + | 132 | Protein_559 | hypothetical protein | - |
| DXE56_RS03045 () | 559788..560252 | + | 465 | WP_078068207.1 | dUTP pyrophosphatase | - |
| DXE56_RS03050 () | 560289..560495 | + | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| DXE56_RS03055 () | 560492..560878 | + | 387 | WP_000592207.1 | hypothetical protein | - |
| DXE56_RS03060 () | 560875..561024 | + | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| DXE56_RS03065 () | 561024..561224 | + | 201 | WP_000265043.1 | DUF1514 family protein | - |
| DXE56_RS03070 () | 561252..561668 | + | 417 | WP_000590122.1 | hypothetical protein | - |
| DXE56_RS03075 () | 561900..562199 | + | 300 | WP_000988330.1 | HNH endonuclease | - |
| DXE56_RS03080 () | 562329..562673 | + | 345 | WP_000402904.1 | hypothetical protein | - |
| DXE56_RS03085 () | 562670..564331 | + | 1662 | WP_000625096.1 | terminase large subunit | - |
| DXE56_RS03090 () | 564347..565534 | + | 1188 | WP_000025266.1 | phage portal protein | - |
| DXE56_RS03095 () | 565518..566255 | + | 738 | WP_000861912.1 | Clp protease ClpP | - |
| DXE56_RS03100 () | 566278..567423 | + | 1146 | WP_031897300.1 | phage major capsid protein | - |
| DXE56_RS03105 () | 567443..567727 | + | 285 | WP_000238236.1 | hypothetical protein | - |
| DXE56_RS03110 () | 567717..568001 | + | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| DXE56_RS03115 () | 567985..568347 | + | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| DXE56_RS03120 () | 568344..568748 | + | 405 | WP_000114341.1 | HK97 gp10 family phage protein | - |
| DXE56_RS03125 () | 568745..569152 | + | 408 | WP_000565498.1 | hypothetical protein | - |
| DXE56_RS03130 () | 569153..569797 | + | 645 | WP_000268736.1 | phage tail protein | - |
| DXE56_RS03135 () | 569839..570063 | + | 225 | WP_071621395.1 | Ig-like domain-containing protein | - |
| DXE56_RS03140 () | 570113..570463 | + | 351 | WP_001096355.1 | hypothetical protein | - |
| DXE56_RS15040 () | 570514..570651 | + | 138 | WP_001549167.1 | hypothetical protein | - |
| DXE56_RS03145 () | 570708..575237 | + | 4530 | WP_062832901.1 | phage tail tape measure protein | - |
| DXE56_RS03150 () | 575234..576718 | + | 1485 | WP_062832900.1 | phage tail family protein | - |
| DXE56_RS03155 () | 576734..580519 | + | 3786 | WP_062832899.1 | hypothetical protein | - |
| DXE56_RS03160 () | 580509..580661 | + | 153 | WP_001153681.1 | hypothetical protein | - |
| DXE56_RS03165 () | 580708..580995 | + | 288 | WP_001040261.1 | hypothetical protein | - |
| DXE56_RS03170 () | 581053..581349 | + | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| DXE56_RS03175 () | 581499..581675 | + | 177 | WP_114621363.1 | putative holin-like toxin | Toxin Detail |
| - () | 581667..581806 | - | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 581667..581806 | - | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 581667..581806 | - | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 581667..581806 | - | 140 | NuclAT_0 | - | Antitoxin Detail |
| DXE56_RS03180 () | 581728..581835 | - | 108 | WP_001791821.1 | hypothetical protein | - |
| DXE56_RS03185 () | 581887..582141 | + | 255 | WP_000611512.1 | phage holin | - |
| DXE56_RS03190 () | 582153..582908 | + | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| DXE56_RS03195 () | 583098..583589 | + | 492 | WP_000920041.1 | Staphylokinase | VF |
| DXE56_RS03210 () | 584190..584524 | + | 335 | Protein_592 | SH3 domain-containing protein | - |
| DXE56_RS03215 () | 584619..585068 | - | 450 | WP_000727645.1 | Chemotaxis inhibitory protein | VF |
| DXE56_RS03220 () | 585751..586101 | + | 351 | WP_000702262.1 | Staphylococcal complement inhibitor | VF |
| DXE56_RS03225 () | 586154..586414 | - | 261 | WP_001791826.1 | hypothetical protein | - |
| DXE56_RS03235 () | 586725..586904 | - | 180 | WP_000669789.1 | hypothetical protein | - |
| DXE56_RS03240 () | 587226..587473 | - | 248 | Protein_597 | sphingomyelin phosphodiesterase | - |
| DXE56_RS03245 () | 587862..589931 | + | 2070 | WP_000669725.1 | extracellular adherence protein Eap/Map | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|