MGE detailed information
MGE type: Prophage MGE length: 54337 bp
Accession: NZ_LT992463 Location: 543678..598014 Organism: Staphylococcus aureus isolate 2_LA_86 Replicon: chromosome
Accession: NZ_LT992463 Location: 543678..598014 Organism: Staphylococcus aureus isolate 2_LA_86 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXE29_RS02520 () | 538951..539982 | + | 1032 | WP_000364856.1 | PTS sugar transporter subunit IIC | - |
| DXE29_RS02525 () | 540325..541443 | + | 1119 | WP_001283977.1 | winged helix-turn-helix transcriptional regulator | - |
| DXE29_RS02530 () | 541418..542341 | + | 924 | WP_000002071.1 | pseudouridine-5'-phosphate glycosidase | - |
| DXE29_RS02535 () | 542352..543572 | + | 1221 | WP_001022977.1 | NupC/NupG family nucleoside CNT transporter | - |
| DXE29_RS02540 () | 543678..545210 | - | 1533 | WP_000665744.1 | sodium:solute symporter | - |
| DXE29_RS02545 () | 545250..546131 | - | 882 | WP_001030735.1 | N-acetylneuraminate lyase | - |
| DXE29_RS02550 () | 546289..547149 | + | 861 | WP_000291432.1 | ROK family protein | - |
| DXE29_RS02555 () | 547426..548226 | - | 801 | WP_000667388.1 | MurR/RpiR family transcriptional regulator | - |
| DXE29_RS02560 () | 548366..549034 | + | 669 | WP_000936721.1 | N-acetylmannosamine-6-phosphate 2-epimerase | - |
| DXE29_RS02565 () | 549164..550477 | - | 1314 | WP_001077706.1 | YjiH family protein | - |
| DXE29_RS02570 () | 550894..552828 | + | 1935 | Protein_486 | YSIRK domain-containing triacylglycerol lipase Lip2/Geh | - |
| DXE29_RS02575 () | 552922..554127 | - | 1206 | WP_000264185.1 | site-specific integrase | - |
| DXE29_RS02580 () | 554237..554851 | + | 615 | WP_000191461.1 | hypothetical protein | - |
| DXE29_RS02585 () | 554848..554994 | - | 147 | WP_001013104.1 | hypothetical protein | - |
| DXE29_RS02590 () | 555224..555808 | - | 585 | WP_000825948.1 | hypothetical protein | - |
| DXE29_RS02595 () | 555826..556284 | - | 459 | WP_000521395.1 | hypothetical protein | - |
| DXE29_RS02600 () | 556306..556632 | - | 327 | WP_000455972.1 | helix-turn-helix domain-containing protein | - |
| DXE29_RS02605 () | 556795..557004 | + | 210 | WP_001114715.1 | helix-turn-helix transcriptional regulator | - |
| DXE29_RS02610 () | 557043..557819 | + | 777 | WP_031886646.1 | Rha family transcriptional regulator | - |
| DXE29_RS02615 () | 557848..557991 | + | 144 | WP_000939498.1 | hypothetical protein | - |
| DXE29_RS02620 () | 557981..558190 | - | 210 | WP_000642492.1 | hypothetical protein | - |
| DXE29_RS02625 () | 558246..558491 | + | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| DXE29_RS02630 () | 558460..558825 | - | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| DXE29_RS02635 () | 558880..559095 | + | 216 | WP_001036302.1 | hypothetical protein | - |
| DXE29_RS02640 () | 559120..559383 | + | 264 | WP_001124190.1 | helix-turn-helix domain-containing protein | - |
| DXE29_RS02645 () | 559396..559557 | + | 162 | WP_001285948.1 | DUF1270 domain-containing protein | - |
| DXE29_RS02650 () | 559636..559959 | + | 324 | WP_000174994.1 | hypothetical protein | - |
| DXE29_RS02655 () | 559974..560336 | + | 363 | WP_000985976.1 | hypothetical protein | - |
| DXE29_RS02660 () | 560333..561499 | + | 1167 | WP_000762545.1 | DUF2800 domain-containing protein | - |
| DXE29_RS02665 () | 561525..562082 | + | 558 | WP_031915349.1 | DUF2815 family protein | - |
| DXE29_RS02670 () | 562151..564103 | + | 1953 | WP_078100362.1 | DNA polymerase | - |
| DXE29_RS02675 () | 564115..564270 | + | 156 | WP_000152769.1 | hypothetical protein | - |
| DXE29_RS02680 () | 564270..564455 | + | 186 | WP_001187243.1 | DUF3113 family protein | - |
| DXE29_RS02685 () | 564456..564761 | + | 306 | WP_000101252.1 | hypothetical protein | - |
| DXE29_RS02690 () | 564889..565248 | + | 360 | WP_000029381.1 | hypothetical protein | - |
| DXE29_RS02695 () | 565249..565497 | + | 249 | WP_031915351.1 | phage protein | - |
| DXE29_RS02700 () | 565511..565717 | + | 207 | WP_000693989.1 | hypothetical protein | - |
| DXE29_RS02705 () | 565720..566127 | + | 408 | WP_000695771.1 | hypothetical protein | - |
| DXE29_RS02710 () | 566124..566318 | + | 195 | WP_000983950.1 | hypothetical protein | - |
| DXE29_RS02715 () | 566315..566752 | + | 438 | WP_000982714.1 | hypothetical protein | - |
| DXE29_RS02720 () | 566749..567114 | + | 366 | WP_001105602.1 | hypothetical protein | - |
| DXE29_RS02725 () | 567107..567355 | + | 249 | WP_001065080.1 | DUF1024 family protein | - |
| DXE29_RS02730 () | 567348..567860 | + | 513 | WP_031915352.1 | dUTP pyrophosphatase | - |
| DXE29_RS02735 () | 567897..568103 | + | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| DXE29_RS02740 () | 568100..568483 | + | 384 | WP_031915353.1 | phage protein | - |
| DXE29_RS02745 () | 568483..568635 | + | 153 | WP_031915354.1 | transcriptional regulator | - |
| DXE29_RS02750 () | 568703..568903 | + | 201 | WP_000265251.1 | DUF1514 family protein | - |
| DXE29_RS02755 () | 568955..571402 | + | 2448 | WP_031915355.1 | virulence-associated E family protein | - |
| DXE29_RS02760 () | 571511..571609 | - | 99 | WP_001801650.1 | hypothetical protein | - |
| DXE29_RS02765 () | 571743..572033 | + | 291 | WP_031790894.1 | VRR-NUC domain-containing protein | - |
| DXE29_RS02770 () | 572014..573381 | + | 1368 | WP_078066486.1 | DEAD/DEAH box helicase | - |
| DXE29_RS02775 () | 573394..573831 | + | 438 | WP_031867792.1 | transcriptional regulator | - |
| DXE29_RS02780 () | 573988..574302 | + | 315 | WP_031915356.1 | HNH endonuclease | - |
| DXE29_RS02785 () | 574430..574735 | + | 306 | WP_000778933.1 | P27 family phage terminase small subunit | - |
| DXE29_RS02790 () | 574725..576416 | + | 1692 | WP_031796929.1 | terminase large subunit | - |
| DXE29_RS02795 () | 576421..577659 | + | 1239 | WP_031796928.1 | phage portal protein | - |
| DXE29_RS02800 () | 577643..578416 | + | 774 | WP_021285854.1 | Clp protease ClpP | - |
| DXE29_RS02805 () | 578428..579591 | + | 1164 | WP_001142738.1 | phage major capsid protein | - |
| DXE29_RS02810 () | 579660..579938 | + | 279 | WP_000050973.1 | head-tail connector protein | - |
| DXE29_RS02815 () | 579950..580282 | + | 333 | WP_016187452.1 | hypothetical protein | - |
| DXE29_RS02820 () | 580279..580680 | + | 402 | WP_000110017.1 | hypothetical protein | - |
| DXE29_RS02825 () | 580681..581076 | + | 396 | WP_001023808.1 | DUF3168 domain-containing protein | - |
| DXE29_RS02830 () | 581111..581752 | + | 642 | WP_031795557.1 | tail protein | - |
| DXE29_RS02835 () | 581844..582299 | + | 456 | WP_000169128.1 | Ig domain-containing protein | - |
| DXE29_RS02840 () | 582357..582707 | + | 351 | WP_031775785.1 | hypothetical protein | - |
| DXE29_RS02845 () | 582749..582907 | + | 159 | WP_000438833.1 | hypothetical protein | - |
| DXE29_RS02850 () | 582921..589121 | + | 6201 | WP_031882235.1 | phage tail tape measure protein | - |
| DXE29_RS02855 () | 589121..589945 | + | 825 | WP_001190533.1 | phage tail family protein | - |
| DXE29_RS02860 () | 589954..591537 | + | 1584 | WP_000384474.1 | prophage endopeptidase tail family protein | - |
| DXE29_RS02865 () | 591537..591827 | + | 291 | WP_000179858.1 | hypothetical protein | - |
| DXE29_RS02870 () | 591843..593753 | + | 1911 | WP_000429558.1 | minor structural protein | - |
| DXE29_RS02875 () | 593753..595219 | + | 1467 | WP_031584731.1 | BppU family phage baseplate upper protein | - |
| DXE29_RS02880 () | 595219..595608 | + | 390 | WP_031910402.1 | DUF2977 domain-containing protein | - |
| DXE29_RS02885 () | 595601..595765 | + | 165 | WP_000916022.1 | XkdX family protein | - |
| DXE29_RS02890 () | 595811..596110 | + | 300 | WP_000466775.1 | DUF2951 family protein | - |
| DXE29_RS02895 () | 596246..596548 | + | 303 | WP_000339146.1 | phage holin | - |
| DXE29_RS02900 () | 596560..598014 | + | 1455 | WP_021285991.1 | N-acetylmuramoyl-L-alanine amidase | - |
| DXE29_RS02915 () | 599148..599975 | - | 828 | WP_000136026.1 | alpha/beta hydrolase | - |
| DXE29_RS02920 () | 600033..601247 | - | 1215 | WP_000286472.1 | NADH-dependent flavin oxidoreductase | - |
| DXE29_RS02925 () | 601343..601435 | + | 93 | WP_014936975.1 | hypothetical protein | - |
| DXE29_RS02930 () | 601549..602550 | + | 1002 | WP_000240067.1 | LLM class flavin-dependent oxidoreductase | - |
| DXE29_RS02935 () | 602584..602916 | + | 333 | WP_000731878.1 | glycine cleavage system protein H | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|