MGE detailed information
MGE type: Prophage MGE length: 44719 bp
Accession: NZ_LT992460 Location: 558762..603480 Organism: Staphylococcus aureus isolate 9_LA_281 Replicon: chromosome
Accession: NZ_LT992460 Location: 558762..603480 Organism: Staphylococcus aureus isolate 9_LA_281 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXE39_RS02980 () | 553860..554192 | - | 333 | WP_000731878.1 | glycine cleavage system protein H | - |
| DXE39_RS02985 () | 554226..555227 | - | 1002 | WP_000240067.1 | LLM class flavin-dependent oxidoreductase | - |
| DXE39_RS02990 () | 555341..555433 | - | 93 | WP_014936975.1 | hypothetical protein | - |
| DXE39_RS02995 () | 555529..556743 | + | 1215 | WP_000286472.1 | NADH-dependent flavin oxidoreductase | - |
| DXE39_RS03000 () | 556801..557628 | + | 828 | WP_000136026.1 | alpha/beta hydrolase | - |
| DXE39_RS03020 () | 558762..560217 | - | 1456 | Protein_553 | N-acetylmuramoyl-L-alanine amidase | - |
| DXE39_RS03025 () | 560229..560531 | - | 303 | WP_000339146.1 | phage holin | - |
| DXE39_RS03030 () | 560667..560966 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| DXE39_RS03035 () | 561012..561176 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| DXE39_RS03040 () | 561169..561558 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| DXE39_RS03045 () | 561558..563024 | - | 1467 | WP_021285990.1 | BppU family phage baseplate upper protein | - |
| DXE39_RS03050 () | 563024..564934 | - | 1911 | WP_000429558.1 | minor structural protein | - |
| DXE39_RS03055 () | 564950..565240 | - | 291 | WP_000179858.1 | hypothetical protein | - |
| DXE39_RS03060 () | 565240..566823 | - | 1584 | WP_000384474.1 | prophage endopeptidase tail family protein | - |
| DXE39_RS03065 () | 566832..567656 | - | 825 | WP_001190533.1 | phage tail family protein | - |
| DXE39_RS03070 () | 567656..573857 | - | 6202 | Protein_563 | phage tail tape measure protein | - |
| DXE39_RS03075 () | 573871..574029 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| DXE39_RS03080 () | 574071..574421 | - | 351 | WP_031775785.1 | hypothetical protein | - |
| DXE39_RS03085 () | 574479..574934 | - | 456 | WP_000169128.1 | Ig domain-containing protein | - |
| DXE39_RS03090 () | 575026..575667 | - | 642 | WP_031795557.1 | tail protein | - |
| DXE39_RS03095 () | 575702..576097 | - | 396 | WP_001023808.1 | DUF3168 domain-containing protein | - |
| DXE39_RS03100 () | 576098..576499 | - | 402 | WP_000110017.1 | hypothetical protein | - |
| DXE39_RS03105 () | 576496..576828 | - | 333 | WP_000395498.1 | hypothetical protein | - |
| DXE39_RS03110 () | 576840..577118 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| DXE39_RS03115 () | 577187..578350 | - | 1164 | WP_001142738.1 | phage major capsid protein | - |
| DXE39_RS03120 () | 578362..579135 | - | 774 | WP_021285854.1 | Clp protease ClpP | - |
| DXE39_RS03125 () | 579119..580357 | - | 1239 | WP_031837780.1 | phage portal protein | - |
| DXE39_RS03130 () | 580362..582053 | - | 1692 | WP_031863772.1 | terminase large subunit | - |
| DXE39_RS03135 () | 582043..582348 | - | 306 | WP_000778933.1 | P27 family phage terminase small subunit | - |
| DXE39_RS03140 () | 582476..582790 | - | 315 | WP_000160693.1 | HNH endonuclease | - |
| DXE39_RS03145 () | 582947..583384 | - | 438 | WP_000513703.1 | transcriptional regulator | - |
| DXE39_RS03150 () | 583397..584764 | - | 1368 | WP_001825320.1 | DEAD/DEAH box helicase | - |
| DXE39_RS03155 () | 584745..585035 | - | 291 | WP_000665203.1 | VRR-NUC domain-containing protein | - |
| DXE39_RS03160 () | 585169..585267 | + | 99 | WP_001801650.1 | hypothetical protein | - |
| DXE39_RS03165 () | 585376..587823 | - | 2448 | WP_031863773.1 | virulence-associated E family protein | - |
| DXE39_RS03170 () | 587875..588075 | - | 201 | WP_000265258.1 | DUF1514 family protein | - |
| DXE39_RS03175 () | 588143..588295 | - | 153 | WP_000595260.1 | transcriptional activator RinB | - |
| DXE39_RS03180 () | 588292..588678 | - | 387 | WP_000592221.1 | hypothetical protein | - |
| DXE39_RS03185 () | 588675..588881 | - | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| DXE39_RS03190 () | 588918..589478 | - | 561 | WP_015977658.1 | dUTP diphosphatase | - |
| DXE39_RS03195 () | 589471..589719 | - | 249 | WP_031794954.1 | DUF1024 family protein | - |
| DXE39_RS03200 () | 589712..590077 | - | 366 | WP_001105602.1 | hypothetical protein | - |
| DXE39_RS03205 () | 590074..590511 | - | 438 | WP_000982714.1 | hypothetical protein | - |
| DXE39_RS03210 () | 590508..590702 | - | 195 | WP_000983950.1 | hypothetical protein | - |
| DXE39_RS03215 () | 590699..591106 | - | 408 | WP_000695771.1 | hypothetical protein | - |
| DXE39_RS03220 () | 591109..591315 | - | 207 | WP_000693989.1 | hypothetical protein | - |
| DXE39_RS03225 () | 591329..591577 | - | 249 | WP_078098389.1 | hypothetical protein | - |
| DXE39_RS03230 () | 591577..591831 | - | 255 | WP_031863776.1 | DUF3310 domain-containing protein | - |
| DXE39_RS03235 () | 591831..592232 | - | 402 | WP_000113977.1 | PVL family protein | - |
| DXE39_RS03240 () | 592232..592417 | - | 186 | WP_001164629.1 | DUF3113 family protein | - |
| DXE39_RS03245 () | 592430..594382 | - | 1953 | WP_078099553.1 | DNA polymerase | - |
| DXE39_RS03250 () | 594451..595005 | - | 555 | WP_000647288.1 | DUF2815 family protein | - |
| DXE39_RS03255 () | 595032..596198 | - | 1167 | WP_031775793.1 | DUF2800 domain-containing protein | - |
| DXE39_RS03260 () | 596195..596557 | - | 363 | WP_031775792.1 | hypothetical protein | - |
| DXE39_RS03265 () | 596572..596895 | - | 324 | WP_000175000.1 | hypothetical protein | - |
| DXE39_RS03270 () | 596974..597135 | - | 162 | WP_001285962.1 | DUF1270 domain-containing protein | - |
| DXE39_RS03275 () | 597148..597411 | - | 264 | WP_001124190.1 | helix-turn-helix domain-containing protein | - |
| DXE39_RS03280 () | 597436..597651 | - | 216 | WP_001036302.1 | hypothetical protein | - |
| DXE39_RS03285 () | 597706..598071 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| DXE39_RS03290 () | 598040..598285 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| DXE39_RS03295 () | 598341..598550 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| DXE39_RS03300 () | 598540..598683 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| DXE39_RS03305 () | 598712..599488 | - | 777 | WP_031886646.1 | Rha family transcriptional regulator | - |
| DXE39_RS03310 () | 599511..599738 | - | 228 | WP_015978369.1 | helix-turn-helix transcriptional regulator | - |
| DXE39_RS03315 () | 599892..600521 | + | 630 | WP_029549401.1 | XRE family transcriptional regulator | - |
| DXE39_RS03320 () | 600578..601162 | + | 585 | WP_114647903.1 | hypothetical protein | - |
| DXE39_RS03325 () | 601392..601538 | + | 147 | WP_001013104.1 | hypothetical protein | - |
| DXE39_RS03330 () | 601535..602149 | - | 615 | WP_000191466.1 | hypothetical protein | - |
| DXE39_RS03335 () | 602275..603480 | + | 1206 | WP_000264745.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| DXE39_RS03340 () | 603574..605508 | - | 1935 | Protein_617 | YSIRK domain-containing triacylglycerol lipase Lip2/Geh | - |
| DXE39_RS03345 () | 605925..607238 | + | 1314 | WP_001077706.1 | YjiH family protein | - |
| DXE39_RS03350 () | 607368..608036 | - | 669 | WP_000936721.1 | N-acetylmannosamine-6-phosphate 2-epimerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|