MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82845 bp
Accession: NZ_LT985195 Location: 1..82845 Organism: Pseudomonas syringae strain CFBP 2116 Replicon: plasmid PP4
Accession: NZ_LT985195 Location: 1..82845 Organism: Pseudomonas syringae strain CFBP 2116 Replicon: plasmid PP4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DTQ61_RS30035 () | 132..413 | + | 282 | WP_010208375.1 | IcmT/TraK family protein | - |
| DTQ61_RS30040 () | 918..5177 | + | 4260 | WP_191985308.1 | DNA primase | - |
| DTQ61_RS30045 () | 5203..5556 | + | 354 | WP_010214729.1 | hypothetical protein | - |
| DTQ61_RS30050 () | 5553..6257 | + | 705 | WP_010214730.1 | DotI/IcmL/TraM family protein | - |
| DTQ61_RS30055 () | 6314..7372 | + | 1059 | WP_081080409.1 | hypothetical protein | VF |
| DTQ61_RS30060 () | 7378..8736 | + | 1359 | WP_060407340.1 | conjugal transfer protein TraO | - |
| DTQ61_RS30065 () | 8733..9443 | + | 711 | WP_010209696.1 | conjugal transfer protein TraP | - |
| DTQ61_RS30070 () | 9452..9994 | + | 543 | WP_010209694.1 | conjugal transfer protein TraQ | - |
| DTQ61_RS30075 () | 10070..10465 | + | 396 | WP_005740383.1 | hypothetical protein | - |
| DTQ61_RS30080 () | 10546..11157 | + | 612 | WP_010209692.1 | hypothetical protein | - |
| DTQ61_RS30085 () | 11132..14188 | + | 3057 | WP_099456609.1 | conjugal transfer protein | - |
| DTQ61_RS30090 () | 14212..14448 | + | 237 | WP_060404097.1 | hypothetical protein | - |
| DTQ61_RS30095 () | 14491..15705 | + | 1215 | WP_060404098.1 | conjugal transfer protein TraW | - |
| DTQ61_RS30100 () | 15695..16273 | + | 579 | WP_004642775.1 | conjugal transfer protein TraX | - |
| DTQ61_RS30105 () | 16404..18548 | + | 2145 | WP_060404099.1 | hypothetical protein | VF |
| DTQ61_RS30110 () | 18535..19194 | + | 660 | WP_044424882.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| DTQ61_RS30115 () | 19287..20489 | + | 1203 | WP_044424879.1 | hypothetical protein | - |
| DTQ61_RS30120 () | 20479..20856 | - | 378 | WP_003344395.1 | PIN domain-containing protein | Toxin Detail |
| DTQ61_RS30125 () | 20853..21053 | - | 201 | WP_004644067.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| DTQ61_RS30130 () | 21146..22231 | + | 1086 | WP_060404100.1 | thioredoxin fold domain-containing protein | - |
| DTQ61_RS30135 () | 22218..23948 | + | 1731 | Protein_21 | TraM recognition domain-containing protein | - |
| DTQ61_RS30140 () | 24270..24698 | + | 429 | WP_007253364.1 | GntR family transcriptional regulator | - |
| DTQ61_RS30145 () | 24787..25107 | + | 321 | WP_111780225.1 | hypothetical protein | - |
| DTQ61_RS30150 () | 25117..25554 | + | 438 | WP_111780226.1 | hypothetical protein | - |
| DTQ61_RS30155 () | 25570..25779 | + | 210 | WP_111780227.1 | hypothetical protein | - |
| DTQ61_RS30160 () | 26177..27490 | + | 1314 | WP_111780228.1 | replication initiation protein | - |
| DTQ61_RS30165 () | 27716..28009 | + | 294 | WP_003348560.1 | HU family DNA-binding protein | - |
| DTQ61_RS30175 () | 28281..28574 | + | 294 | WP_003348565.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DTQ61_RS30180 () | 28714..29241 | + | 528 | WP_003348567.1 | hypothetical protein | - |
| DTQ61_RS30185 () | 29238..29912 | - | 675 | WP_080269136.1 | Mobilization protein A | Relaxase |
| DTQ61_RS30190 () | 30125..30397 | - | 273 | WP_065348728.1 | arylsulfatase regulator | - |
| DTQ61_RS30195 () | 30817..31851 | - | 1035 | WP_057427112.1 | IS110 family transposase ISPsy16 | Transposase |
| DTQ61_RS30200 () | 32204..33889 | + | 1686 | Protein_33 | relaxase | - |
| DTQ61_RS30205 () | 34013..34441 | + | 429 | WP_058886866.1 | GntR family transcriptional regulator | - |
| DTQ61_RS30210 () | 34632..35534 | + | 903 | WP_103377096.1 | hypothetical protein | - |
| DTQ61_RS30215 () | 35551..35784 | + | 234 | WP_099456679.1 | hypothetical protein | - |
| DTQ61_RS30220 () | 36182..37497 | + | 1316 | Protein_37 | replication initiation protein | - |
| DTQ61_RS30225 () | 37720..38008 | + | 289 | Protein_38 | HU family DNA-binding protein | - |
| DTQ61_RS30230 () | 38153..38851 | + | 699 | WP_099456680.1 | GNAT family N-acetyltransferase | - |
| DTQ61_RS30235 () | 39192..39587 | + | 396 | WP_005740917.1 | CesT family type III secretion system chaperone | - |
| DTQ61_RS30240 () | 39600..40442 | + | 843 | WP_080439351.1 | type III effector HopF2 | - |
| DTQ61_RS30245 () | 40718..41875 | - | 1158 | WP_005740916.1 | putative DNA binding domain-containing protein | - |
| DTQ61_RS30250 () | 41857..44524 | - | 2668 | Protein_43 | histidinol-phosphatase | - |
| DTQ61_RS30255 () | 44667..45033 | - | 367 | Protein_44 | MobA/MobL family protein | - |
| DTQ61_RS30260 () | 45072..45345 | - | 274 | Protein_45 | arylsulfatase regulator | - |
| DTQ61_RS30265 () | 45452..46077 | - | 626 | Protein_46 | recombinase family protein | - |
| DTQ61_RS30270 () | 46381..47328 | - | 948 | WP_005769731.1 | hypothetical protein | - |
| DTQ61_RS30275 () | 47690..47971 | - | 282 | WP_004666803.1 | hypothetical protein | - |
| DTQ61_RS30280 () | 47971..48654 | - | 684 | WP_002556051.1 | AAA family ATPase | - |
| DTQ61_RS30285 () | 49049..49249 | + | 201 | WP_002556050.1 | molecular chaperone DnaK | - |
| DTQ61_RS30290 () | 49287..49508 | + | 222 | WP_004666801.1 | hypothetical protein | - |
| DTQ61_RS30300 () | 49838..50224 | - | 387 | WP_162497155.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| DTQ61_RS30305 () | 50611..50979 | - | 369 | WP_173929313.1 | hypothetical protein | - |
| DTQ61_RS30315 () | 51251..52480 | - | 1230 | WP_015062536.1 | IS91 family transposase IS801 | Transposase |
| DTQ61_RS30320 () | 52461..52742 | - | 282 | WP_015062535.1 | hypothetical protein | - |
| DTQ61_RS30330 () | 53016..53183 | - | 168 | Protein_56 | IS91 family transposase | - |
| DTQ61_RS30340 () | 53289..54422 | - | 1134 | WP_060404090.1 | hypothetical protein | - |
| DTQ61_RS30345 () | 54586..54966 | - | 381 | WP_044424089.1 | CesT family type III secretion system chaperone | - |
| DTQ61_RS30350 () | 55074..55229 | - | 156 | Protein_59 | Tn3 family transposase | - |
| DTQ61_RS30355 () | 55336..55440 | + | 105 | Protein_60 | TraR/DksA family transcriptional regulator | - |
| DTQ61_RS30360 () | 55478..55699 | + | 222 | WP_003381774.1 | hypothetical protein | - |
| DTQ61_RS30380 () | 56385..57140 | - | 756 | Protein_62 | IS91 family transposase IS801 | Transposase |
| DTQ61_RS30385 () | 57331..58826 | + | 1496 | Protein_63 | IS21 family transposase ISPsy14 | Transposase |
| DTQ61_RS30390 () | 58847..59602 | + | 756 | WP_060403177.1 | IS21 family transposase ISPsy14 | Transposase |
| DTQ61_RS30395 () | 59687..60199 | - | 513 | Protein_65 | transposase zinc-binding domain-containing protein | - |
| DTQ61_RS30400 () | 60180..60461 | - | 282 | WP_065348680.1 | hypothetical protein | - |
| DTQ61_RS30405 () | 60436..60900 | - | 465 | WP_081080443.1 | AAA family ATPase | - |
| DTQ61_RS30410 () | 60942..62555 | - | 1614 | WP_031598748.1 | Methyl-accepting chemotaxis protein CtpH | VF |
| DTQ61_RS30415 () | 62739..63359 | - | 621 | WP_031598751.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| DTQ61_RS30420 () | 63567..63905 | + | 339 | WP_054071658.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DTQ61_RS30425 () | 63905..64192 | + | 288 | WP_005622028.1 | helix-turn-helix domain-containing protein | - |
| DTQ61_RS30430 () | 64254..64667 | + | 414 | WP_060403414.1 | hypothetical protein | - |
| DTQ61_RS30440 () | 64971..65885 | + | 915 | WP_060407305.1 | hypothetical protein | - |
| DTQ61_RS30445 () | 66360..66737 | + | 378 | WP_007247501.1 | hypothetical protein | - |
| DTQ61_RS30450 () | 66784..67620 | + | 837 | WP_060407272.1 | DUF945 domain-containing protein | - |
| DTQ61_RS30455 () | 67680..67880 | + | 201 | WP_055001606.1 | hypothetical protein | - |
| DTQ61_RS30460 () | 67947..68225 | - | 279 | WP_004661031.1 | mobilization protein | - |
| DTQ61_RS30470 () | 68523..68873 | - | 351 | WP_060407318.1 | hypothetical protein | - |
| DTQ61_RS30475 () | 69133..69462 | + | 330 | WP_111780229.1 | ribbon-helix-helix protein, CopG family | - |
| DTQ61_RS30480 () | 69473..71428 | + | 1956 | WP_007247497.1 | hypothetical protein | Relaxase |
| DTQ61_RS30485 () | 71453..72136 | - | 684 | WP_032640233.1 | hypothetical protein | - |
| DTQ61_RS30490 () | 72270..72770 | + | 501 | WP_007247495.1 | Protein hcp1 | VF |
| DTQ61_RS30495 () | 72795..73322 | + | 528 | WP_010204128.1 | DUF2778 domain-containing protein | - |
| DTQ61_RS30505 () | 73829..74710 | - | 882 | WP_010204121.1 | HTH-type transcriptional regulator GltC | VF |
| DTQ61_RS30510 () | 75001..76332 | + | 1332 | WP_031598409.1 | MFS transporter | - |
| DTQ61_RS31015 () | 76543..76719 | + | 177 | WP_010209149.1 | hypothetical protein | - |
| DTQ61_RS30515 () | 76738..77094 | - | 357 | WP_007247489.1 | helix-turn-helix domain-containing protein | - |
| DTQ61_RS30520 () | 77338..77871 | + | 534 | WP_005769797.1 | transcriptional regulator | - |
| DTQ61_RS30525 () | 77960..78169 | + | 210 | WP_003344343.1 | hypothetical protein | - |
| DTQ61_RS30535 () | 78462..78953 | + | 492 | WP_010209157.1 | hypothetical protein | VF |
| DTQ61_RS30540 () | 78990..79463 | + | 474 | WP_005759124.1 | DotD/TraH family lipoprotein | - |
| DTQ61_RS30545 () | 79460..80260 | + | 801 | WP_007247253.1 | hypothetical protein | VF |
| DTQ61_RS30550 () | 80257..81438 | + | 1182 | WP_060404092.1 | hypothetical protein | VF |
| DTQ61_RS30555 () | 81570..81803 | + | 234 | WP_010209171.1 | hypothetical protein | - |
| DTQ61_RS30560 () | 81841..82089 | + | 249 | WP_053486299.1 | hypothetical protein | - |
| DTQ61_RS30565 () | 82169..82666 | + | 498 | WP_010208377.1 | Cardiolipin synthase B | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|