MGE detailed information
MGE type: IScluster/Tn MGE length: 20198 bp
Accession: NZ_LT985194 Location: 37991..58188 Organism: Pseudomonas syringae strain CFBP 2116 Replicon: plasmid PP3
Accession: NZ_LT985194 Location: 37991..58188 Organism: Pseudomonas syringae strain CFBP 2116 Replicon: plasmid PP3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DTQ61_RS29685 () | 33030..33539 | + | 510 | WP_005735414.1 | peptide deformylase | - |
| DTQ61_RS29690 () | 33683..33956 | + | 274 | Protein_40 | IS21 family transposase | - |
| DTQ61_RS29695 () | 34168..35133 | + | 966 | WP_024420007.1 | isopenicillin N synthase family oxygenase | - |
| DTQ61_RS29700 () | 35172..36620 | + | 1449 | WP_005622074.1 | FAD-binding oxidoreductase | - |
| DTQ61_RS29705 () | 36664..37170 | + | 507 | Protein_43 | DNA polymerase V subunit UmuC | - |
| DTQ61_RS29710 () | 37991..38308 | - | 318 | Protein_44 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| DTQ61_RS29720 () | 38793..39980 | - | 1188 | WP_111780219.1 | AMP-binding protein | - |
| DTQ61_RS29725 () | 40063..41439 | - | 1377 | WP_065348661.1 | multidrug transporter MatE | - |
| DTQ61_RS29735 () | 42011..43240 | - | 1230 | WP_104721077.1 | IS91 family transposase IS801 | Transposase |
| DTQ61_RS29740 () | 43221..43502 | - | 282 | WP_060407302.1 | hypothetical protein | - |
| DTQ61_RS29750 () | 43776..45002 | - | 1227 | WP_104721076.1 | IS91 family transposase IS801 | Transposase |
| DTQ61_RS29760 () | 45558..45740 | + | 183 | WP_044310977.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| DTQ61_RS29765 () | 45772..46194 | + | 423 | WP_060404204.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| DTQ61_RS29770 () | 46360..46671 | + | 312 | Protein_52 | hypothetical protein | - |
| DTQ61_RS29775 () | 46703..49729 | - | 3027 | WP_060404205.1 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| DTQ61_RS29780 () | 49719..50315 | - | 597 | WP_057425230.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| DTQ61_RS31005 () | 50632..51162 | - | 531 | WP_005752338.1 | hypothetical protein | - |
| DTQ61_RS29790 () | 51891..52568 | - | 678 | Protein_56 | IS91 family transposase IS801 | Transposase |
| DTQ61_RS29795 () | 52549..52830 | - | 282 | WP_060402791.1 | hypothetical protein | - |
| DTQ61_RS29810 () | 53331..54563 | - | 1233 | WP_104698134.1 | IS91 family transposase IS801 | Transposase |
| DTQ61_RS29815 () | 54688..55293 | + | 606 | WP_060403786.1 | T3SS effector protein kinase HopBF1 | - |
| DTQ61_RS29830 () | 56360..57169 | - | 810 | WP_005741073.1 | IS21 family transposase ISPsy4 | Transposase |
| DTQ61_RS29835 () | 57166..58188 | - | 1023 | WP_002551322.1 | IS21 family transposase ISPsy4 | Transposase |
| DTQ61_RS29840 () | 58243..58503 | - | 261 | WP_103356806.1 | hypothetical protein | - |
| DTQ61_RS29845 () | 58920..59744 | + | 825 | WP_060404139.1 | alpha/beta fold hydrolase | - |
| DTQ61_RS29860 () | 60042..60353 | - | 312 | WP_060404140.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DTQ61_RS29865 () | 60350..60601 | - | 252 | WP_004643047.1 | antitoxin | - |
| DTQ61_RS29870 () | 60778..62475 | + | 1698 | Protein_66 | hypothetical protein | - |
| DTQ61_RS29875 () | 62540..62779 | + | 240 | WP_004666950.1 | hypothetical protein | - |
| DTQ61_RS31010 () | 62856..62993 | + | 138 | WP_015060871.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|