MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 83816 bp
Accession: NZ_LT985194 Location: 1..83816 Organism: Pseudomonas syringae strain CFBP 2116 Replicon: plasmid PP3
Accession: NZ_LT985194 Location: 1..83816 Organism: Pseudomonas syringae strain CFBP 2116 Replicon: plasmid PP3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DTQ61_RS29470 () | 774..1022 | + | 249 | WP_044310906.1 | hypothetical protein | - |
| DTQ61_RS30995 () | 1024..1200 | + | 177 | WP_158662098.1 | hypothetical protein | - |
| DTQ61_RS29475 () | 1208..1558 | + | 351 | WP_135004263.1 | hypothetical protein | - |
| DTQ61_RS29480 () | 2187..2531 | - | 345 | Protein_3 | hypothetical protein | - |
| DTQ61_RS29485 () | 2931..3317 | - | 387 | WP_044310909.1 | hypothetical protein | - |
| DTQ61_RS29490 () | 3588..4550 | - | 963 | WP_099456684.1 | tyrosine-type recombinase/integrase | - |
| DTQ61_RS29495 () | 5285..5713 | + | 429 | WP_044310941.1 | pilin | - |
| DTQ61_RS29500 () | 5866..6282 | + | 417 | WP_099456683.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| DTQ61_RS29505 () | 7638..10031 | - | 2394 | Protein_8 | RHS repeat protein | - |
| DTQ61_RS29510 () | 10028..11563 | - | 1536 | WP_099456682.1 | RHS repeat protein | - |
| DTQ61_RS29515 () | 11903..13402 | + | 1500 | WP_103356851.1 | IS21 family transposase ISPsy20 | Transposase |
| DTQ61_RS29520 () | 13395..14198 | + | 804 | WP_003417182.1 | IS21 family transposase ISPsy20 | Transposase |
| DTQ61_RS29525 () | 14539..15384 | - | 846 | WP_057447598.1 | hypothetical protein | - |
| DTQ61_RS29530 () | 15720..16211 | - | 492 | Protein_13 | IS91 family transposase ISPsy3 | Transposase |
| DTQ61_RS29535 () | 16245..16502 | - | 258 | Protein_14 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| DTQ61_RS29540 () | 16509..17045 | - | 537 | Protein_15 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| DTQ61_RS29545 () | 17276..17716 | + | 441 | WP_053486278.1 | hypothetical protein | - |
| DTQ61_RS29550 () | 17874..18422 | - | 549 | WP_044424146.1 | hypothetical protein | - |
| DTQ61_RS29560 () | 18928..19305 | + | 378 | WP_007247501.1 | hypothetical protein | - |
| DTQ61_RS29565 () | 19352..20188 | + | 837 | WP_103753198.1 | DUF945 domain-containing protein | - |
| DTQ61_RS29570 () | 20256..20456 | + | 201 | WP_004666908.1 | hypothetical protein | - |
| DTQ61_RS29575 () | 20523..20801 | - | 279 | WP_111780218.1 | mobilization protein | - |
| DTQ61_RS29585 () | 21099..21443 | - | 345 | WP_005622131.1 | hypothetical protein | - |
| DTQ61_RS29590 () | 21703..22032 | + | 330 | WP_060402973.1 | ribbon-helix-helix protein, CopG family | - |
| DTQ61_RS29595 () | 22043..23998 | + | 1956 | WP_060402972.1 | hypothetical protein | Relaxase |
| DTQ61_RS29600 () | 24242..24607 | - | 366 | WP_019740136.1 | helix-turn-helix transcriptional regulator | - |
| DTQ61_RS29605 () | 25002..25205 | + | 204 | WP_053486275.1 | hypothetical protein | - |
| DTQ61_RS29615 () | 25498..25860 | + | 363 | Protein_27 | lytic transglycosylase domain-containing protein | - |
| DTQ61_RS29620 () | 25857..25938 | + | 82 | Protein_28 | DUF159 family protein | - |
| DTQ61_RS29625 () | 26041..27270 | - | 1230 | WP_015062536.1 | IS91 family transposase IS801 | Transposase |
| DTQ61_RS29630 () | 27251..27532 | - | 282 | WP_015062535.1 | hypothetical protein | - |
| DTQ61_RS31000 () | 27815..28155 | + | 341 | Protein_31 | hypothetical protein | - |
| DTQ61_RS29640 () | 28271..28543 | + | 273 | WP_060403602.1 | hypothetical protein | - |
| DTQ61_RS29645 () | 28756..29430 | + | 675 | WP_081080454.1 | Mobilization protein A | Relaxase |
| DTQ61_RS29650 () | 29427..29954 | - | 528 | WP_003348567.1 | hypothetical protein | - |
| DTQ61_RS29655 () | 30070..30363 | - | 294 | WP_005730619.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DTQ61_RS29665 () | 30635..30928 | - | 294 | WP_060403601.1 | HU family DNA-binding protein | - |
| DTQ61_RS29670 () | 31251..31532 | + | 282 | WP_015062535.1 | hypothetical protein | - |
| DTQ61_RS29675 () | 31513..32742 | + | 1230 | WP_015062536.1 | IS91 family transposase IS801 | Transposase |
| DTQ61_RS29685 () | 33030..33539 | + | 510 | WP_005735414.1 | peptide deformylase | - |
| DTQ61_RS29690 () | 33683..33956 | + | 274 | Protein_40 | IS21 family transposase | - |
| DTQ61_RS29695 () | 34168..35133 | + | 966 | WP_024420007.1 | isopenicillin N synthase family oxygenase | - |
| DTQ61_RS29700 () | 35172..36620 | + | 1449 | WP_005622074.1 | FAD-binding oxidoreductase | - |
| DTQ61_RS29705 () | 36664..37170 | + | 507 | Protein_43 | DNA polymerase V subunit UmuC | - |
| DTQ61_RS29710 () | 37991..38308 | - | 318 | Protein_44 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| DTQ61_RS29720 () | 38793..39980 | - | 1188 | WP_111780219.1 | AMP-binding protein | - |
| DTQ61_RS29725 () | 40063..41439 | - | 1377 | WP_065348661.1 | multidrug transporter MatE | - |
| DTQ61_RS29735 () | 42011..43240 | - | 1230 | WP_104721077.1 | IS91 family transposase IS801 | Transposase |
| DTQ61_RS29740 () | 43221..43502 | - | 282 | WP_060407302.1 | hypothetical protein | - |
| DTQ61_RS29750 () | 43776..45002 | - | 1227 | WP_104721076.1 | IS91 family transposase IS801 | Transposase |
| DTQ61_RS29760 () | 45558..45740 | + | 183 | WP_044310977.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| DTQ61_RS29765 () | 45772..46194 | + | 423 | WP_060404204.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| DTQ61_RS29770 () | 46360..46671 | + | 312 | Protein_52 | hypothetical protein | - |
| DTQ61_RS29775 () | 46703..49729 | - | 3027 | WP_060404205.1 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| DTQ61_RS29780 () | 49719..50315 | - | 597 | WP_057425230.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| DTQ61_RS31005 () | 50632..51162 | - | 531 | WP_005752338.1 | hypothetical protein | - |
| DTQ61_RS29790 () | 51891..52568 | - | 678 | Protein_56 | IS91 family transposase IS801 | Transposase |
| DTQ61_RS29795 () | 52549..52830 | - | 282 | WP_060402791.1 | hypothetical protein | - |
| DTQ61_RS29810 () | 53331..54563 | - | 1233 | WP_104698134.1 | IS91 family transposase IS801 | Transposase |
| DTQ61_RS29815 () | 54688..55293 | + | 606 | WP_060403786.1 | T3SS effector protein kinase HopBF1 | - |
| DTQ61_RS29830 () | 56360..57169 | - | 810 | WP_005741073.1 | IS21 family transposase ISPsy4 | Transposase |
| DTQ61_RS29835 () | 57166..58188 | - | 1023 | WP_002551322.1 | IS21 family transposase ISPsy4 | Transposase |
| DTQ61_RS29840 () | 58243..58503 | - | 261 | WP_103356806.1 | hypothetical protein | - |
| DTQ61_RS29845 () | 58920..59744 | + | 825 | WP_060404139.1 | alpha/beta fold hydrolase | - |
| DTQ61_RS29860 () | 60042..60353 | - | 312 | WP_060404140.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DTQ61_RS29865 () | 60350..60601 | - | 252 | WP_004643047.1 | antitoxin | - |
| DTQ61_RS29870 () | 60778..62475 | + | 1698 | Protein_66 | hypothetical protein | - |
| DTQ61_RS29875 () | 62540..62779 | + | 240 | WP_004666950.1 | hypothetical protein | - |
| DTQ61_RS31010 () | 62856..62993 | + | 138 | WP_015060871.1 | hypothetical protein | - |
| DTQ61_RS29880 () | 63113..63541 | + | 429 | WP_015060872.1 | GntR family transcriptional regulator | - |
| DTQ61_RS29890 () | 63895..64797 | + | 903 | WP_111780220.1 | hypothetical protein | - |
| DTQ61_RS29895 () | 64814..65041 | + | 228 | WP_111780221.1 | hypothetical protein | - |
| DTQ61_RS29900 () | 65511..66257 | + | 747 | WP_099456498.1 | hypothetical protein | - |
| DTQ61_RS29910 () | 67119..68348 | - | 1230 | WP_015062536.1 | IS91 family transposase IS801 | Transposase |
| DTQ61_RS30715 () | 68329..68610 | - | 282 | WP_060402147.1 | hypothetical protein | - |
| DTQ61_RS29920 () | 68739..69164 | + | 426 | WP_060403065.1 | S24 family peptidase | - |
| DTQ61_RS29925 () | 69142..70446 | + | 1305 | WP_060403064.1 | Y-family DNA polymerase | - |
| DTQ61_RS29930 () | 70479..71288 | - | 810 | WP_005741073.1 | IS21 family transposase ISPsy4 | Transposase |
| DTQ61_RS29935 () | 71285..72307 | - | 1023 | WP_002551322.1 | IS21 family transposase ISPsy4 | Transposase |
| DTQ61_RS29940 () | 72394..72528 | - | 135 | Protein_79 | integrase | - |
| DTQ61_RS29945 () | 72525..73001 | - | 477 | WP_081080360.1 | GNAT family N-acetyltransferase | - |
| DTQ61_RS29950 () | 73243..74211 | + | 969 | WP_060402986.1 | hypothetical protein | - |
| DTQ61_RS29955 () | 74377..74658 | + | 282 | WP_060402987.1 | DUF1778 domain-containing protein | - |
| DTQ61_RS29960 () | 74655..75152 | + | 498 | WP_060402988.1 | GNAT family N-acetyltransferase | - |
| DTQ61_RS29965 () | 75650..76012 | - | 363 | WP_099456686.1 | hypothetical protein | - |
| DTQ61_RS29970 () | 76003..76683 | - | 681 | WP_005730279.1 | AAA family ATPase | - |
| DTQ61_RS29975 () | 77275..78309 | - | 1035 | WP_057427112.1 | IS110 family transposase ISPsy16 | Transposase |
| DTQ61_RS29980 () | 78483..78971 | + | 489 | WP_024421281.1 | hypothetical protein | - |
| DTQ61_RS29985 () | 79233..80267 | + | 1035 | WP_057427112.1 | IS110 family transposase ISPsy16 | Transposase |
| DTQ61_RS29990 () | 80669..81223 | + | 555 | WP_111780222.1 | hypothetical protein | - |
| DTQ61_RS29995 () | 81274..81504 | + | 231 | WP_031598890.1 | carbon storage regulator | - |
| DTQ61_RS30010 () | 82039..82563 | - | 525 | WP_080719055.1 | DUF2778 domain-containing protein | - |
| DTQ61_RS30015 () | 82587..83087 | - | 501 | WP_031598893.1 | Protein hcp1 | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|