MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 74939 bp
Accession: NZ_LT969520 Location: 5742949..5817887 Organism: Pseudomonas aeruginosa isolate RW109 Replicon: chromosome
Accession: NZ_LT969520 Location: 5742949..5817887 Organism: Pseudomonas aeruginosa isolate RW109 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RW109_RS31045 () | 5738065..5738832 | + | 768 | WP_004352844.1 | DUF2857 domain-containing protein | - |
| RW109_RS31050 () | 5738829..5740154 | + | 1326 | WP_023082035.1 | hypothetical protein | - |
| RW109_RS38725 () | 5740413..5740811 | + | 399 | WP_145867879.1 | hypothetical protein | - |
| RW109_RS38730 () | 5740812..5740982 | + | 171 | WP_186364076.1 | hypothetical protein | - |
| RW109_RS38735 () | 5740983..5741267 | + | 285 | WP_143481045.1 | hypothetical protein | - |
| RW109_RS31065 () | 5741694..5741891 | + | 198 | WP_023082036.1 | hypothetical protein | - |
| RW109_RS31070 () | 5742048..5742776 | + | 729 | WP_023082037.1 | TIGR03761 family integrating conjugative element protein | - |
| RW109_RS31075 () | 5742782..5743330 | + | 549 | WP_023082038.1 | DUF3158 family protein | - |
| RW109_RS31080 () | 5743378..5744220 | + | 843 | WP_023082039.1 | Rha family transcriptional regulator | - |
| RW109_RS31085 () | 5744250..5744738 | + | 489 | WP_023082040.1 | single-stranded DNA-binding protein | - |
| RW109_RS31090 () | 5744846..5745199 | + | 354 | WP_003120979.1 | helix-turn-helix domain-containing protein | - |
| RW109_RS31095 () | 5745253..5746479 | - | 1227 | WP_010794468.1 | IS256 family transposase ISPa1328 | Transposase |
| RW109_RS31100 () | 5746655..5746822 | + | 168 | WP_128729268.1 | CrpP family protein | - |
| RW109_RS31105 () | 5746937..5748856 | + | 1920 | WP_023082041.1 | type I DNA topoisomerase | - |
| RW109_RS31110 () | 5748864..5749616 | + | 753 | WP_023082042.1 | hypothetical protein | - |
| RW109_RS31120 () | 5749917..5751806 | + | 1890 | WP_101476551.1 | hypothetical protein | - |
| RW109_RS31125 () | 5751803..5753779 | + | 1977 | WP_016851611.1 | DEAD/DEAH box helicase | - |
| RW109_RS31130 () | 5753920..5754264 | + | 345 | WP_016851612.1 | hypothetical protein | - |
| RW109_RS31135 () | 5754335..5754625 | - | 291 | WP_003448662.1 | putative addiction module antidote protein | Antitoxin Detail |
| RW109_RS31140 () | 5754622..5754921 | - | 300 | WP_003120987.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| RW109_RS31145 () | 5755123..5756247 | + | 1125 | WP_012076859.1 | hypothetical protein | VF |
| RW109_RS31150 () | 5756247..5757956 | + | 1710 | WP_023125172.1 | hypothetical protein | VF |
| RW109_RS31155 () | 5757960..5759285 | + | 1326 | WP_003120992.1 | type 4b pilus protein PilO2 | - |
| RW109_RS31160 () | 5759275..5759808 | + | 534 | WP_003120993.1 | type IV pilus biogenesis protein PilP | - |
| RW109_RS31165 () | 5759817..5761397 | + | 1581 | WP_003120994.1 | hypothetical protein | VF |
| RW109_RS31170 () | 5761397..5762476 | + | 1080 | WP_003123335.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| RW109_RS31175 () | 5762498..5763028 | + | 531 | WP_003120996.1 | pilus assembly protein PilX | - |
| RW109_RS31180 () | 5763025..5763981 | + | 957 | WP_003448639.1 | Twitching mobility protein | VF |
| RW109_RS31185 () | 5763974..5765353 | + | 1380 | WP_003099769.1 | hypothetical protein | VF |
| RW109_RS31190 () | 5765371..5765808 | + | 438 | WP_003120998.1 | hypothetical protein | VF |
| RW109_RS31200 () | 5766730..5767296 | + | 567 | WP_003120999.1 | hypothetical protein | - |
| RW109_RS31205 () | 5767602..5768971 | + | 1370 | WP_096316580.1 | IS3 family transposase | - |
| RW109_RS31210 () | 5769005..5769373 | + | 369 | WP_078451037.1 | IS66 family insertion sequence hypothetical protein | - |
| RW109_RS31215 () | 5769370..5769705 | + | 336 | WP_019719038.1 | IS66 family transposase ISPsy43 | Transposase |
| RW109_RS31220 () | 5769787..5771343 | + | 1557 | WP_019818069.1 | IS66 family transposase ISPpu19 | Transposase |
| RW109_RS31225 () | 5771998..5772960 | + | 963 | WP_004577240.1 | IS30 family transposase ISPpu17 | Transposase |
| RW109_RS31230 () | 5773035..5774321 | + | 1287 | WP_020302086.1 | outer membrane protein transport protein | - |
| RW109_RS31235 () | 5774972..5775460 | + | 489 | WP_003448595.1 | DUF3577 domain-containing protein | - |
| RW109_RS38740 () | 5775598..5775756 | + | 159 | WP_003121002.1 | hypothetical protein | - |
| RW109_RS31240 () | 5775830..5776027 | + | 198 | WP_003448593.1 | hypothetical protein | - |
| RW109_RS31245 () | 5776219..5776932 | + | 714 | WP_003121003.1 | hypothetical protein | - |
| RW109_RS31250 () | 5777168..5777518 | + | 351 | WP_003099791.1 | hypothetical protein | - |
| RW109_RS31255 () | 5777575..5778207 | + | 633 | WP_003099792.1 | DUF3275 family protein | - |
| RW109_RS31260 () | 5778204..5778479 | + | 276 | WP_003099794.1 | hypothetical protein | - |
| RW109_RS31265 () | 5778549..5778911 | + | 363 | WP_003099795.1 | hypothetical protein | - |
| RW109_RS31270 () | 5778979..5779239 | + | 261 | WP_003099797.1 | hypothetical protein | - |
| RW109_RS31275 () | 5779332..5779937 | + | 606 | WP_003099799.1 | hypothetical protein | - |
| RW109_RS31280 () | 5779967..5781412 | + | 1446 | WP_003099801.1 | class I SAM-dependent methyltransferase | - |
| RW109_RS31285 () | 5781517..5783766 | + | 2250 | WP_003099803.1 | DEAD/DEAH box helicase | - |
| RW109_RS31290 () | 5784090..5785316 | + | 1227 | WP_023082048.1 | hypothetical protein | - |
| RW109_RS31300 () | 5785715..5786986 | + | 1272 | WP_023082049.1 | IS4 family transposase ISPa45 | Transposase |
| RW109_RS31305 () | 5787232..5787339 | + | 108 | Protein_5454 | helix-turn-helix domain-containing protein | - |
| RW109_RS31310 () | 5787405..5788079 | - | 675 | WP_031643852.1 | hypothetical protein | - |
| RW109_RS31315 () | 5788162..5788827 | - | 666 | WP_031643854.1 | DUF3218 family protein | - |
| RW109_RS31320 () | 5788838..5789869 | - | 1032 | WP_031643855.1 | hypothetical protein | - |
| RW109_RS31325 () | 5790478..5791167 | + | 690 | WP_023082052.1 | hypothetical protein | - |
| RW109_RS31330 () | 5791178..5791933 | + | 756 | WP_023082053.1 | TIGR03759 family integrating conjugative element protein | - |
| RW109_RS31335 () | 5791918..5792499 | + | 582 | WP_015648301.1 | hypothetical protein | VF |
| RW109_RS31340 () | 5792496..5792996 | + | 501 | WP_023082054.1 | integrating conjugative element protein | - |
| RW109_RS31345 () | 5793005..5793274 | + | 270 | WP_023082055.1 | hypothetical protein | - |
| RW109_RS31350 () | 5793278..5795509 | + | 2232 | WP_023082056.1 | type IV conjugative transfer system coupling protein TraD | - |
| RW109_RS31355 () | 5795509..5796255 | + | 747 | WP_057384359.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| RW109_RS31360 () | 5796273..5796764 | + | 492 | WP_003099826.1 | hypothetical protein | - |
| RW109_RS31365 () | 5797005..5798486 | + | 1482 | WP_023104737.1 | UvrD-helicase domain-containing protein | - |
| RW109_RS38745 () | 5798618..5799727 | + | 1110 | WP_023093054.1 | hypothetical protein | - |
| RW109_RS31375 () | 5799772..5800083 | - | 312 | WP_003117074.1 | DUF2845 domain-containing protein | - |
| RW109_RS31380 () | 5800256..5800555 | + | 300 | WP_003109393.1 | hypothetical protein | - |
| RW109_RS31385 () | 5800648..5800986 | + | 339 | WP_020751097.1 | RAQPRD family integrative conjugative element protein | - |
| RW109_RS31390 () | 5800983..5801222 | + | 240 | WP_023443559.1 | TIGR03758 family integrating conjugative element protein | - |
| RW109_RS31395 () | 5801240..5801596 | + | 357 | WP_003109398.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| RW109_RS31400 () | 5801607..5801993 | + | 387 | WP_012076871.1 | TIGR03750 family conjugal transfer protein | - |
| RW109_RS31405 () | 5801990..5802649 | + | 660 | WP_042911446.1 | TIGR03746 family integrating conjugative element protein | - |
| RW109_RS31410 () | 5802646..5803530 | + | 885 | WP_101476555.1 | TIGR03749 family integrating conjugative element protein | - |
| RW109_RS31415 () | 5803514..5805019 | + | 1506 | WP_020751098.1 | TIGR03752 family integrating conjugative element protein | - |
| RW109_RS31420 () | 5804997..5805440 | + | 444 | WP_020751099.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| RW109_RS31425 () | 5805440..5808382 | + | 2943 | WP_101476552.1 | conjugative transfer ATPase | - |
| RW109_RS31430 () | 5808379..5808663 | + | 285 | WP_031691299.1 | hypothetical protein | - |
| RW109_RS31435 () | 5808660..5809319 | + | 660 | WP_034008122.1 | DsbA family protein | - |
| RW109_RS31440 () | 5809316..5809534 | - | 219 | WP_003099864.1 | hypothetical protein | - |
| RW109_RS31445 () | 5809743..5810174 | + | 432 | WP_003099865.1 | TIGR03757 family integrating conjugative element protein | - |
| RW109_RS31450 () | 5810174..5811112 | + | 939 | WP_003099867.1 | TIGR03756 family integrating conjugative element protein | - |
| RW109_RS31455 () | 5811130..5812518 | + | 1389 | WP_023101924.1 | integrating conjugative element protein | - |
| RW109_RS31460 () | 5812518..5812865 | + | 348 | WP_003117086.1 | hypothetical protein | - |
| RW109_RS31465 () | 5812862..5814373 | + | 1512 | WP_023087695.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| RW109_RS31470 () | 5814399..5814743 | - | 345 | WP_071534978.1 | hypothetical protein | - |
| RW109_RS31475 () | 5814862..5815134 | + | 273 | WP_023087696.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| RW109_RS31480 () | 5815138..5815488 | + | 351 | WP_023087697.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| RW109_RS31485 () | 5815819..5817708 | + | 1890 | WP_023101925.1 | helicase/relaxase domain-containing protein | - |
| RW109_RS31490 () | 5817705..5819045 | + | 1341 | WP_003099879.1 | site-specific integrase | - |
| RW109_RS31495 () | 5819499..5820056 | + | 558 | Protein_5492 | Tn3 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|