MGE detailed information
MGE type: Genomic_island MGE length: 29215 bp
Accession: NZ_LT969520 Location: 1170272..1199486 Organism: Pseudomonas aeruginosa isolate RW109 Replicon: chromosome
Accession: NZ_LT969520 Location: 1170272..1199486 Organism: Pseudomonas aeruginosa isolate RW109 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RW109_RS08890 () | 1165589..1166158 | + | 570 | WP_003114324.1 | pseudouridine synthase | - |
| RW109_RS08895 () | 1166192..1166584 | - | 393 | WP_003093127.1 | globin | - |
| RW109_RS08900 () | 1166685..1166894 | - | 210 | WP_003093125.1 | DUF2788 domain-containing protein | - |
| RW109_RS08905 () | 1167096..1167605 | - | 510 | WP_003119210.1 | Lrp/AsnC family transcriptional regulator | - |
| RW109_RS08910 () | 1168053..1168736 | + | 684 | WP_003118264.1 | hypothetical protein | - |
| RW109_RS08915 () | 1168729..1169625 | - | 897 | WP_003093118.1 | CDF family cation-efflux transporter FieF | - |
| RW109_RS08920 () | 1169714..1170130 | - | 417 | WP_003093116.1 | hypothetical protein | - |
| RW109_RS08925 () | 1170272..1170727 | + | 456 | WP_023128597.1 | DEAD/DEAH box helicase | - |
| RW109_RS08930 () | 1170781..1173303 | + | 2523 | WP_015649536.1 | ATP-dependent helicase HrpB | - |
| RW109_RS08935 () | 1173625..1174077 | - | 453 | WP_015649535.1 | hypothetical protein | - |
| RW109_RS08940 () | 1174340..1175026 | - | 687 | WP_015649534.1 | helix-turn-helix domain-containing protein | - |
| RW109_RS08945 () | 1175321..1175977 | + | 657 | WP_015649533.1 | hypothetical protein | - |
| RW109_RS08950 () | 1175970..1176836 | + | 867 | WP_015649532.1 | ImmA/IrrE family metallo-endopeptidase | - |
| RW109_RS08955 () | 1176829..1177905 | + | 1077 | WP_015649531.1 | hypothetical protein | - |
| RW109_RS08960 () | 1177864..1178451 | - | 588 | WP_071534663.1 | sce7726 family protein | - |
| RW109_RS08965 () | 1178645..1178857 | + | 213 | WP_023128602.1 | hypothetical protein | - |
| RW109_RS08970 () | 1178948..1179403 | - | 456 | WP_025297646.1 | helix-turn-helix domain-containing protein | - |
| RW109_RS08975 () | 1179568..1179963 | + | 396 | WP_023128603.1 | hypothetical protein | - |
| RW109_RS08980 () | 1180006..1180476 | + | 471 | WP_023128604.1 | hypothetical protein | - |
| RW109_RS08985 () | 1180479..1180862 | + | 384 | WP_025297645.1 | hypothetical protein | - |
| RW109_RS08990 () | 1180944..1181522 | + | 579 | WP_057384237.1 | hypothetical protein | - |
| RW109_RS08995 () | 1181853..1182217 | + | 365 | Protein_1144 | DNA binding protein | - |
| RW109_RS09000 () | 1182441..1182635 | - | 195 | WP_023128607.1 | OprD family outer membrane porin | - |
| RW109_RS09005 () | 1182634..1183329 | + | 696 | WP_196747054.1 | transporter substrate-binding domain-containing protein | - |
| RW109_RS09010 () | 1183542..1183835 | - | 294 | WP_158025315.1 | type II toxin-antitoxin system RnlB family antitoxin | Antitoxin Detail |
| RW109_RS09015 () | 1183890..1184963 | - | 1074 | WP_025297643.1 | type II toxin-antitoxin system RnlA family toxin | Toxin Detail |
| RW109_RS09020 () | 1185678..1185932 | + | 255 | WP_023128610.1 | hypothetical protein | - |
| RW109_RS09030 () | 1186230..1186526 | + | 297 | WP_023128612.1 | hypothetical protein | - |
| RW109_RS09035 () | 1186579..1188162 | - | 1584 | WP_025297642.1 | hypothetical protein | - |
| RW109_RS09040 () | 1188442..1188870 | + | 429 | WP_025297641.1 | S24 family peptidase | - |
| RW109_RS09045 () | 1188857..1188976 | + | 120 | Protein_1153 | hypothetical protein | - |
| RW109_RS09050 () | 1189096..1190253 | + | 1158 | WP_028692960.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| RW109_RS09055 () | 1190294..1191871 | + | 1578 | WP_079281405.1 | hypothetical protein | - |
| RW109_RS38465 () | 1191868..1193709 | + | 1842 | WP_169882208.1 | hypothetical protein ; Integrase | Integrase |
| RW109_RS09065 () | 1193702..1194118 | + | 417 | WP_079384160.1 | TetR family transcriptional regulator | - |
| RW109_RS09070 () | 1194208..1195170 | - | 963 | WP_028692954.1 | SdiA-regulated domain-containing protein | - |
| RW109_RS09075 () | 1195216..1195569 | - | 354 | WP_028692953.1 | TraR/DksA C4-type zinc finger protein | - |
| RW109_RS09080 () | 1195575..1196426 | - | 852 | WP_028692952.1 | universal stress protein | - |
| RW109_RS09085 () | 1196441..1197928 | - | 1488 | WP_028692951.1 | SulP family inorganic anion transporter | - |
| RW109_RS09090 () | 1198377..1199542 | + | 1166 | Protein_1162 | translesion error-prone DNA polymerase V subunit UmuC | - |
| RW109_RS09095 () | 1199696..1199989 | + | 294 | WP_023128615.1 | hypothetical protein | - |
| RW109_RS09105 () | 1201520..1203670 | + | 2151 | WP_096226339.1 | ATP-dependent helicase HrpB | - |
| RW109_RS09110 () | 1203681..1204088 | - | 408 | WP_003093113.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|