MGE detailed information
MGE type: IScluster/Tn MGE length: 12324 bp
Accession: NZ_LT963413 Location: 574..12897 Organism: Pseudomonas syringae isolate CFBP3840 Replicon: plasmid PP4
Accession: NZ_LT963413 Location: 574..12897 Organism: Pseudomonas syringae isolate CFBP3840 Replicon: plasmid PP4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6H39_RS30485 () | 574..1170 | + | 597 | WP_057425230.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| C6H39_RS30490 () | 1160..4186 | + | 3027 | WP_060404205.1 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| C6H39_RS30495 () | 4218..4529 | - | 312 | Protein_3 | hypothetical protein | - |
| C6H39_RS30500 () | 4695..5117 | - | 423 | WP_060404204.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| C6H39_RS30505 () | 5149..5331 | - | 183 | WP_044310977.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| C6H39_RS30510 () | 5624..5905 | + | 282 | WP_060402791.1 | hypothetical protein | - |
| C6H39_RS30515 () | 5886..7112 | + | 1227 | WP_104721076.1 | IS91 family transposase IS801 | Transposase |
| C6H39_RS30525 () | 7386..7667 | + | 282 | WP_060407302.1 | hypothetical protein | - |
| C6H39_RS30530 () | 7648..8877 | + | 1230 | WP_104721077.1 | IS91 family transposase IS801 | Transposase |
| C6H39_RS30540 () | 9449..10825 | + | 1377 | WP_065348661.1 | multidrug transporter MatE | - |
| C6H39_RS30545 () | 10908..12095 | + | 1188 | WP_060403067.1 | AMP-binding protein | - |
| C6H39_RS30555 () | 12580..12897 | + | 318 | Protein_12 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| C6H39_RS30560 () | 13717..14223 | - | 507 | Protein_13 | DNA polymerase V subunit UmuC | - |
| C6H39_RS30565 () | 14267..15715 | - | 1449 | WP_005622074.1 | FAD-binding oxidoreductase | - |
| C6H39_RS30570 () | 15754..16719 | - | 966 | WP_024420007.1 | isopenicillin N synthase family oxygenase | - |
| C6H39_RS30575 () | 16931..17204 | - | 274 | Protein_16 | IS21 family transposase | - |
| C6H39_RS30580 () | 17348..17857 | - | 510 | WP_005735414.1 | peptide deformylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|