MGE detailed information
MGE type: IScluster/Tn MGE length: 6702 bp
Accession: NZ_LT963413 Location: 18145..24846 Organism: Pseudomonas syringae isolate CFBP3840 Replicon: plasmid PP4
Accession: NZ_LT963413 Location: 18145..24846 Organism: Pseudomonas syringae isolate CFBP3840 Replicon: plasmid PP4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6H39_RS30560 () | 13717..14223 | - | 507 | Protein_13 | DNA polymerase V subunit UmuC | - |
| C6H39_RS30565 () | 14267..15715 | - | 1449 | WP_005622074.1 | FAD-binding oxidoreductase | - |
| C6H39_RS30570 () | 15754..16719 | - | 966 | WP_024420007.1 | isopenicillin N synthase family oxygenase | - |
| C6H39_RS30575 () | 16931..17204 | - | 274 | Protein_16 | IS21 family transposase | - |
| C6H39_RS30580 () | 17348..17857 | - | 510 | WP_005735414.1 | peptide deformylase | - |
| C6H39_RS30590 () | 18145..19374 | - | 1230 | WP_015062536.1 | IS91 family transposase IS801 | Transposase |
| C6H39_RS30595 () | 19355..19636 | - | 282 | WP_015062535.1 | hypothetical protein | - |
| C6H39_RS31875 () | 19919..20259 | + | 341 | Protein_20 | hypothetical protein | - |
| C6H39_RS30605 () | 20375..20647 | + | 273 | WP_060403602.1 | hypothetical protein | - |
| C6H39_RS30610 () | 20860..21534 | + | 675 | WP_081080454.1 | Mobilization protein A | Relaxase |
| C6H39_RS30615 () | 21531..22058 | - | 528 | WP_003348567.1 | hypothetical protein | - |
| C6H39_RS30620 () | 22174..22467 | - | 294 | WP_005730619.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6H39_RS30625 () | 22467..22652 | - | 186 | WP_003348562.1 | hypothetical protein | Antitoxin Detail |
| C6H39_RS30630 () | 22739..23032 | - | 294 | WP_060403601.1 | HU family DNA-binding protein | - |
| C6H39_RS30635 () | 23355..23636 | + | 282 | WP_015062535.1 | hypothetical protein | - |
| C6H39_RS30640 () | 23617..24846 | + | 1230 | WP_015062536.1 | IS91 family transposase IS801 | Transposase |
| C6H39_RS30645 () | 24949..25030 | - | 82 | Protein_29 | DUF159 family protein | - |
| C6H39_RS30650 () | 25027..25389 | - | 363 | Protein_30 | lytic transglycosylase domain-containing protein | - |
| C6H39_RS30660 () | 25682..25885 | - | 204 | WP_053486275.1 | hypothetical protein | - |
| C6H39_RS30665 () | 26280..26645 | + | 366 | WP_019740136.1 | helix-turn-helix transcriptional regulator | - |
| C6H39_RS30670 () | 26889..28844 | - | 1956 | WP_060402972.1 | relaxase/mobilization nuclease domain-containing protein | - |
| C6H39_RS30675 () | 28855..29184 | - | 330 | WP_060402973.1 | ribbon-helix-helix protein, CopG family | - |
| C6H39_RS30680 () | 29444..29788 | + | 345 | WP_005622131.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|