MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 90464 bp
Accession: NZ_LT963411 Location: 1..90464 Organism: Pseudomonas syringae isolate CFBP3840 Replicon: plasmid PP2
Accession: NZ_LT963411 Location: 1..90464 Organism: Pseudomonas syringae isolate CFBP3840 Replicon: plasmid PP2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6H39_RS29445 () | 729..1154 | + | 426 | WP_104721063.1 | S24 family peptidase | - |
| C6H39_RS29450 () | 1132..2430 | + | 1299 | WP_104721064.1 | Y-family DNA polymerase | - |
| C6H39_RS32125 () | 3308..3679 | - | 372 | WP_173929314.1 | hypothetical protein | - |
| C6H39_RS29460 () | 4481..4798 | + | 318 | WP_057414325.1 | hypothetical protein | - |
| C6H39_RS31665 () | 4851..4997 | + | 147 | WP_154072982.1 | hypothetical protein | - |
| C6H39_RS29475 () | 5584..6813 | - | 1230 | WP_015062536.1 | IS91 family transposase | - |
| C6H39_RS29480 () | 6794..7075 | - | 282 | WP_015062535.1 | hypothetical protein | - |
| C6H39_RS29485 () | 7165..7344 | + | 180 | Protein_8 | N-acetyltransferase | - |
| C6H39_RS29490 () | 8153..8548 | + | 396 | WP_058886841.1 | CesT family type III secretion system chaperone | - |
| C6H39_RS29495 () | 8559..9146 | + | 588 | WP_081080359.1 | hypothetical protein | - |
| C6H39_RS29500 () | 9260..10061 | - | 802 | Protein_11 | IS3 family transposase IS51 | Transposase |
| C6H39_RS29510 () | 10298..11401 | - | 1104 | WP_004663854.1 | IS5 family transposase ISPsy19 | Transposase |
| C6H39_RS29515 () | 11473..11799 | - | 327 | WP_003319696.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| C6H39_RS29520 () | 11796..12020 | - | 225 | WP_003319697.1 | antitoxin MazE family protein | Antitoxin Detail |
| C6H39_RS29525 () | 12293..12925 | - | 633 | WP_024421175.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| C6H39_RS29530 () | 13230..14177 | - | 948 | WP_005769731.1 | hypothetical protein | - |
| C6H39_RS29535 () | 14539..14820 | - | 282 | WP_004666803.1 | hypothetical protein | - |
| C6H39_RS29540 () | 14820..15503 | - | 684 | WP_002556051.1 | AAA family ATPase | - |
| C6H39_RS29545 () | 15898..16098 | + | 201 | WP_002556050.1 | molecular chaperone DnaK | - |
| C6H39_RS29550 () | 16136..16357 | + | 222 | WP_004666801.1 | hypothetical protein | - |
| C6H39_RS29560 () | 16687..17073 | - | 387 | WP_162497155.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| C6H39_RS29565 () | 17460..17828 | - | 369 | WP_173929313.1 | hypothetical protein | - |
| C6H39_RS29575 () | 18099..18266 | - | 168 | Protein_23 | IS91 family transposase | - |
| C6H39_RS29585 () | 18372..19505 | - | 1134 | WP_060404090.1 | hypothetical protein | - |
| C6H39_RS29590 () | 19669..20049 | - | 381 | WP_044424089.1 | CesT family type III secretion system chaperone | - |
| C6H39_RS29595 () | 20157..20312 | - | 156 | Protein_26 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| C6H39_RS29600 () | 20419..20523 | + | 105 | Protein_27 | TraR/DksA family transcriptional regulator | - |
| C6H39_RS29605 () | 20561..20782 | + | 222 | WP_003381774.1 | hypothetical protein | - |
| C6H39_RS29625 () | 21468..22223 | - | 756 | Protein_29 | IS91 family transposase IS801 | Transposase |
| C6H39_RS29630 () | 22414..23909 | + | 1496 | Protein_30 | IS21 family transposase ISPsy14 | Transposase |
| C6H39_RS29635 () | 23930..24685 | + | 756 | WP_060403177.1 | IS21 family transposase ISPsy14 | Transposase |
| C6H39_RS29640 () | 24770..25282 | - | 513 | Protein_32 | transposase zinc-binding domain-containing protein | - |
| C6H39_RS29645 () | 25263..25544 | - | 282 | WP_065348680.1 | hypothetical protein | - |
| C6H39_RS29650 () | 25519..25983 | - | 465 | WP_081080443.1 | AAA family ATPase | - |
| C6H39_RS29655 () | 26025..27638 | - | 1614 | WP_031598748.1 | Methyl-accepting chemotaxis protein CtpH | VF |
| C6H39_RS29660 () | 27822..28442 | - | 621 | WP_031598751.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| C6H39_RS29665 () | 28834..29082 | + | 249 | WP_044310906.1 | hypothetical protein | - |
| C6H39_RS31670 () | 29084..29260 | + | 177 | WP_158662098.1 | hypothetical protein | - |
| C6H39_RS29670 () | 29268..29618 | + | 351 | WP_135004263.1 | hypothetical protein | - |
| C6H39_RS29675 () | 30247..30591 | - | 345 | Protein_40 | hypothetical protein | - |
| C6H39_RS29680 () | 30991..31377 | - | 387 | WP_044310909.1 | hypothetical protein | - |
| C6H39_RS29685 () | 31648..32610 | - | 963 | WP_099456684.1 | tyrosine-type recombinase/integrase | - |
| C6H39_RS29690 () | 33345..33773 | + | 429 | WP_044310941.1 | Fimbrial protein | VF |
| C6H39_RS29695 () | 33926..34342 | + | 417 | WP_099456683.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| C6H39_RS29700 () | 35698..38092 | - | 2395 | Protein_45 | RHS repeat protein | - |
| C6H39_RS29705 () | 38089..39624 | - | 1536 | WP_099456682.1 | RHS repeat protein | - |
| C6H39_RS29710 () | 39963..41462 | + | 1500 | WP_103356851.1 | IS21 family transposase ISPsy20 | Transposase |
| C6H39_RS29715 () | 41455..42258 | + | 804 | WP_003417182.1 | IS21 family transposase ISPsy20 | Transposase |
| C6H39_RS29720 () | 42599..42886 | - | 288 | WP_158662099.1 | hypothetical protein | - |
| C6H39_RS29725 () | 43783..44274 | - | 492 | Protein_50 | IS91 family transposase ISPsy3 | Transposase |
| C6H39_RS29730 () | 44308..44565 | - | 258 | Protein_51 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| C6H39_RS29735 () | 44572..45108 | - | 537 | Protein_52 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| C6H39_RS29740 () | 45316..45654 | + | 339 | WP_054071658.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C6H39_RS29745 () | 45654..45941 | + | 288 | WP_005622028.1 | helix-turn-helix domain-containing protein | - |
| C6H39_RS29750 () | 46003..46416 | + | 414 | WP_060403414.1 | hypothetical protein | - |
| C6H39_RS29760 () | 46720..47634 | + | 915 | WP_060407305.1 | hypothetical protein | - |
| C6H39_RS29765 () | 48109..48486 | + | 378 | WP_007247501.1 | hypothetical protein | - |
| C6H39_RS29770 () | 48533..49368 | + | 836 | Protein_58 | DUF945 domain-containing protein | - |
| C6H39_RS29775 () | 49428..49628 | + | 201 | WP_055001606.1 | hypothetical protein | - |
| C6H39_RS29780 () | 49695..49973 | - | 279 | WP_004661031.1 | mobilization protein | - |
| C6H39_RS29790 () | 50272..50622 | - | 351 | WP_060407318.1 | hypothetical protein | - |
| C6H39_RS29795 () | 50884..51214 | + | 331 | Protein_62 | CopG family transcriptional regulator | - |
| C6H39_RS29800 () | 51225..53181 | + | 1957 | Protein_63 | hypothetical protein | Relaxase |
| C6H39_RS29805 () | 53206..53889 | - | 684 | WP_032640233.1 | hypothetical protein | - |
| C6H39_RS29810 () | 54023..54523 | + | 501 | WP_007247495.1 | hypothetical protein | VF |
| C6H39_RS29815 () | 54548..55075 | + | 528 | WP_010204128.1 | DUF2778 domain-containing protein | - |
| C6H39_RS29825 () | 55582..56463 | - | 882 | WP_010204121.1 | HTH-type transcriptional regulator GltC | VF |
| C6H39_RS29830 () | 56754..58085 | + | 1332 | WP_031598409.1 | MFS transporter | - |
| C6H39_RS32130 () | 58296..58472 | + | 177 | WP_010209149.1 | hypothetical protein | - |
| C6H39_RS29835 () | 58491..58847 | - | 357 | WP_007247489.1 | helix-turn-helix domain-containing protein | - |
| C6H39_RS29840 () | 59091..59624 | + | 534 | WP_005769797.1 | transcriptional regulator | - |
| C6H39_RS29845 () | 59713..59922 | + | 210 | WP_003344343.1 | hypothetical protein | - |
| C6H39_RS29855 () | 60215..60706 | + | 492 | WP_010209157.1 | hypothetical protein | VF |
| C6H39_RS29860 () | 60743..61216 | + | 474 | WP_005759124.1 | DotD/TraH family lipoprotein | - |
| C6H39_RS29865 () | 61213..62013 | + | 801 | WP_007247253.1 | hypothetical protein | VF |
| C6H39_RS29870 () | 62010..63191 | + | 1182 | WP_060404092.1 | hypothetical protein | VF |
| C6H39_RS29875 () | 63323..63556 | + | 234 | WP_010209171.1 | hypothetical protein | - |
| C6H39_RS29880 () | 63594..63842 | + | 249 | WP_053486299.1 | hypothetical protein | - |
| C6H39_RS29885 () | 63922..64419 | + | 498 | WP_010208377.1 | Cardiolipin synthase B | VF |
| C6H39_RS29890 () | 64456..64701 | + | 246 | WP_010208376.1 | hypothetical protein | - |
| C6H39_RS29895 () | 64730..65011 | + | 282 | WP_010208375.1 | IcmT/TraK family protein | - |
| C6H39_RS29900 () | 65516..69804 | + | 4289 | Protein_82 | DNA primase | - |
| C6H39_RS29905 () | 69830..70183 | + | 354 | WP_010214729.1 | hypothetical protein | - |
| C6H39_RS29910 () | 70180..70884 | + | 705 | WP_010214730.1 | DotI/IcmL/TraM family protein | - |
| C6H39_RS29915 () | 70941..71999 | + | 1059 | WP_081080409.1 | hypothetical protein | VF |
| C6H39_RS29920 () | 72005..73363 | + | 1359 | WP_060407340.1 | conjugal transfer protein TraO | - |
| C6H39_RS29925 () | 73360..74070 | + | 711 | WP_010209696.1 | conjugal transfer protein TraP | - |
| C6H39_RS29930 () | 74079..74621 | + | 543 | WP_003344373.1 | conjugal transfer protein TraQ | - |
| C6H39_RS29935 () | 74697..75092 | + | 396 | WP_005740383.1 | hypothetical protein | - |
| C6H39_RS29940 () | 75174..75785 | + | 612 | WP_104721066.1 | conjugal transfer protein TraT | - |
| C6H39_RS29945 () | 75760..78816 | + | 3057 | WP_104721067.1 | conjugal transfer protein | - |
| C6H39_RS29950 () | 78840..79076 | + | 237 | WP_004666882.1 | hypothetical protein | - |
| C6H39_RS29955 () | 79119..80333 | + | 1215 | WP_104721068.1 | conjugal transfer protein TraW | - |
| C6H39_RS29960 () | 80323..80925 | + | 603 | WP_053480968.1 | conjugal transfer protein TraX | - |
| C6H39_RS29965 () | 80952..83096 | + | 2145 | WP_104721069.1 | DotA/TraY family protein | - |
| C6H39_RS29970 () | 83200..83445 | + | 246 | WP_004668176.1 | hypothetical protein | - |
| C6H39_RS29975 () | 83442..84095 | + | 654 | WP_104721070.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| C6H39_RS29980 () | 84188..85387 | + | 1200 | WP_104721071.1 | conjugal transfer protein | - |
| C6H39_RS29985 () | 85473..86549 | + | 1077 | WP_104721072.1 | thioredoxin fold domain-containing protein | - |
| C6H39_RS29990 () | 86536..88824 | + | 2289 | WP_060404101.1 | type IV secretory system conjugative DNA transfer family protein | - |
| C6H39_RS29995 () | 88902..89330 | + | 429 | WP_011107000.1 | GntR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|