MGE detailed information
MGE type: Genomic_island MGE length: 17338 bp
Accession: NZ_LT963409 Location: 5849448..5866785 Organism: Pseudomonas syringae isolate CFBP3840 Replicon: chromosome
Accession: NZ_LT963409 Location: 5849448..5866785 Organism: Pseudomonas syringae isolate CFBP3840 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6H39_RS27850 () | 5845203..5847818 | - | 2616 | WP_060403108.1 | AAA family ATPase | - |
| C6H39_RS27860 () | 5848202..5848843 | - | 642 | WP_060403107.1 | SOS response-associated peptidase | - |
| C6H39_RS27865 () | 5849108..5849359 | - | 252 | WP_003348789.1 | ribbon-helix-helix protein, CopG family | - |
| C6H39_RS27870 () | 5849448..5850101 | - | 654 | WP_060403115.1 | AAA family ATPase | - |
| C6H39_RS27880 () | 5850497..5850913 | - | 417 | WP_060403106.1 | hypothetical protein | - |
| C6H39_RS27890 () | 5851445..5851744 | + | 300 | WP_044322659.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6H39_RS27895 () | 5851741..5852025 | + | 285 | WP_003407168.1 | putative addiction module antidote protein | Antitoxin Detail |
| C6H39_RS27900 () | 5852100..5852408 | - | 309 | WP_180275929.1 | DUF4113 domain-containing protein | - |
| C6H39_RS27905 () | 5852781..5853799 | + | 1019 | Protein_5211 | tyrosine protein phosphatase | - |
| C6H39_RS27910 () | 5854363..5854584 | - | 222 | WP_004666801.1 | hypothetical protein | - |
| C6H39_RS27915 () | 5854735..5855820 | + | 1086 | WP_002556026.1 | DUF3616 domain-containing protein | - |
| C6H39_RS27920 () | 5856413..5857318 | + | 906 | WP_057425411.1 | serine hydrolase | - |
| C6H39_RS27925 () | 5857360..5860248 | - | 2889 | WP_060403776.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| C6H39_RS27930 () | 5860342..5860947 | + | 606 | WP_044295311.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| C6H39_RS32105 () | 5861058..5861149 | - | 92 | Protein_5217 | transposase | - |
| C6H39_RS27935 () | 5861216..5861878 | - | 663 | WP_060403777.1 | hypothetical protein | - |
| C6H39_RS27940 () | 5862520..5862825 | - | 306 | WP_054071526.1 | type III chaperone protein ShcF | - |
| C6H39_RS27950 () | 5864043..5865266 | + | 1224 | WP_081083437.1 | RHS repeat protein | - |
| C6H39_RS27955 () | 5865994..5866785 | + | 792 | WP_057431753.1 | RHS repeat protein | - |
| C6H39_RS27960 () | 5866782..5869604 | + | 2823 | WP_060403779.1 | RHS repeat protein | - |
| C6H39_RS27965 () | 5869594..5869998 | + | 405 | WP_057456424.1 | hypothetical protein | - |
| C6H39_RS27970 () | 5870105..5870455 | - | 351 | WP_057456423.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C6H39_RS27975 () | 5870468..5870716 | - | 249 | WP_057432311.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|