MGE detailed information
MGE type: IScluster/Tn MGE length: 17528 bp
Accession: NZ_LT963406 Location: 57044..74571 Organism: Pseudomonas syringae pv. avii isolate CFBP3846 Replicon: plasmid PP4
Accession: NZ_LT963406 Location: 57044..74571 Organism: Pseudomonas syringae pv. avii isolate CFBP3846 Replicon: plasmid PP4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6H38_RS31390 () | 52266..52628 | - | 363 | WP_060412322.1 | killer protein | - |
| C6H38_RS31395 () | 52669..54342 | - | 1674 | WP_060412321.1 | type IV secretory system conjugative DNA transfer family protein | - |
| C6H38_RS31400 () | 54342..54575 | - | 234 | WP_060412320.1 | hypothetical protein | - |
| C6H38_RS31405 () | 54691..54984 | - | 294 | WP_060412319.1 | hypothetical protein | - |
| C6H38_RS31410 () | 55087..56103 | - | 1017 | WP_031598824.1 | hypothetical protein | - |
| C6H38_RS31415 () | 56139..56339 | - | 201 | WP_031598826.1 | type IV secretory system conjugative DNA transfer family protein | - |
| C6H38_RS31420 () | 56339..56572 | - | 234 | WP_060412318.1 | hypothetical protein | - |
| C6H38_RS31430 () | 57044..57853 | - | 810 | WP_104698146.1 | IS21 family transposase ISPsy4 | Transposase |
| C6H38_RS31435 () | 57850..58872 | - | 1023 | WP_002551322.1 | IS21 family transposase ISPsy4 | Transposase |
| C6H38_RS31440 () | 58961..59044 | + | 84 | Protein_72 | DUF4113 domain-containing protein | - |
| C6H38_RS31445 () | 59118..59387 | + | 270 | WP_003348774.1 | hypothetical protein | - |
| C6H38_RS31450 () | 59459..59743 | - | 285 | WP_003348777.1 | putative addiction module antidote protein | Antitoxin Detail |
| C6H38_RS31455 () | 59740..60039 | - | 300 | WP_011282511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6H38_RS31460 () | 60420..61175 | - | 756 | WP_060402572.1 | IS21 family transposase ISPsy40 | Transposase |
| C6H38_RS31465 () | 61196..62710 | - | 1515 | WP_005740312.1 | IS21 family transposase ISPsy14 | Transposase |
| C6H38_RS31475 () | 63154..63570 | + | 417 | WP_003348781.1 | hypothetical protein | - |
| C6H38_RS31485 () | 63965..64618 | + | 654 | WP_003348786.1 | AAA family ATPase | - |
| C6H38_RS31490 () | 64707..64958 | + | 252 | WP_003348789.1 | ribbon-helix-helix protein, CopG family | - |
| C6H38_RS31495 () | 65226..65867 | + | 642 | WP_058398749.1 | SOS response-associated peptidase family protein | - |
| C6H38_RS31500 () | 66097..66384 | + | 288 | WP_003319480.1 | hypothetical protein | - |
| C6H38_RS31505 () | 66473..66712 | + | 240 | WP_058398748.1 | hypothetical protein | - |
| C6H38_RS31510 () | 66887..67909 | + | 1023 | WP_002551322.1 | IS21 family transposase ISPsy4 | Transposase |
| C6H38_RS31515 () | 67906..68715 | + | 810 | WP_005741073.1 | IS21 family transposase ISPsy4 | Transposase |
| C6H38_RS31525 () | 68989..69480 | + | 492 | WP_058398746.1 | hypothetical protein | - |
| C6H38_RS32365 () | 69501..69659 | + | 159 | WP_158607438.1 | hypothetical protein | - |
| C6H38_RS31535 () | 70061..70336 | + | 276 | WP_058398786.1 | hypothetical protein | - |
| C6H38_RS31540 () | 70381..70686 | + | 306 | WP_058398785.1 | hypothetical protein | - |
| C6H38_RS31545 () | 70698..70958 | + | 261 | WP_058398784.1 | hypothetical protein | - |
| C6H38_RS31550 () | 71057..71473 | + | 417 | WP_058398783.1 | hypothetical protein | - |
| C6H38_RS31555 () | 71663..72046 | + | 384 | WP_058398782.1 | hypothetical protein | - |
| C6H38_RS32370 () | 72297..72629 | + | 333 | WP_003317539.1 | IS66 family transposase ISPpu19 | Transposase |
| C6H38_RS32375 () | 72626..72961 | + | 336 | WP_004409766.1 | IS66 family transposase ISPsy43 | Transposase |
| C6H38_RS31575 () | 73045..74571 | + | 1527 | WP_054090576.1 | IS66 family transposase ISPsy43 | Transposase |
| C6H38_RS31580 () | 74858..76894 | + | 2037 | WP_054080285.1 | methyl-accepting chemotaxis protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|