MGE detailed information
MGE type: IScluster/Tn MGE length: 9955 bp
Accession: NZ_LT963406 Location: 5681..15635 Organism: Pseudomonas syringae pv. avii isolate CFBP3846 Replicon: plasmid PP4
Accession: NZ_LT963406 Location: 5681..15635 Organism: Pseudomonas syringae pv. avii isolate CFBP3846 Replicon: plasmid PP4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6H38_RS31045 () | 848..1531 | - | 684 | WP_058398779.1 | hypothetical protein | - |
| C6H38_RS31050 () | 1724..3343 | + | 1620 | WP_003425021.1 | methyl-accepting chemotaxis protein | - |
| C6H38_RS31055 () | 3469..3804 | - | 336 | Protein_3 | DUF1264 domain-containing protein | - |
| C6H38_RS31060 () | 4027..4251 | + | 225 | WP_003425025.1 | hypothetical protein | - |
| C6H38_RS31065 () | 4685..5119 | - | 435 | WP_003425026.1 | helix-turn-helix domain-containing protein | - |
| C6H38_RS31070 () | 5211..5648 | + | 438 | Protein_6 | arsenic resistance protein | - |
| C6H38_RS31075 () | 5681..8647 | - | 2967 | WP_060402558.1 | Tn3 family transposase TnpA_ISPa40 | Transposase |
| C6H38_RS31080 () | 8651..9211 | - | 561 | WP_005737570.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| C6H38_RS31090 () | 9951..10616 | + | 666 | WP_032641726.1 | hypothetical protein | - |
| C6H38_RS32345 () | 10772..10936 | + | 165 | WP_004666862.1 | hypothetical protein | - |
| C6H38_RS31095 () | 10970..11197 | - | 228 | Protein_11 | IS21 family transposase ISPsy4 | Transposase |
| C6H38_RS31100 () | 11194..12216 | - | 1023 | WP_002551322.1 | IS21 family transposase ISPsy4 | Transposase |
| C6H38_RS31105 () | 12462..12662 | + | 201 | WP_002555995.1 | hypothetical protein | Antitoxin Detail |
| C6H38_RS31110 () | 12662..12940 | + | 279 | WP_002555994.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6H38_RS31115 () | 13345..14859 | + | 1515 | WP_005740312.1 | IS21 family transposase ISPsy14 | Transposase |
| C6H38_RS31120 () | 14880..15635 | + | 756 | WP_060402572.1 | IS21 family transposase ISPsy40 | Transposase |
| C6H38_RS31130 () | 15842..16915 | + | 1074 | Protein_17 | hypothetical protein | - |
| C6H38_RS31135 () | 17034..17291 | + | 258 | WP_053479520.1 | transcriptional regulator | - |
| C6H38_RS32785 () | 17368..17505 | + | 138 | WP_172678953.1 | hypothetical protein | - |
| C6H38_RS31140 () | 17639..18067 | + | 429 | WP_060412549.1 | GntR family transcriptional regulator | - |
| C6H38_RS32790 () | 18147..18374 | + | 228 | WP_031598801.1 | hypothetical protein | - |
| C6H38_RS31150 () | 18773..20086 | + | 1314 | WP_060412548.1 | replication initiation protein | - |
| C6H38_RS31155 () | 20311..20604 | + | 294 | WP_060403601.1 | HU family DNA-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|