MGE detailed information
MGE type: IScluster/Tn MGE length: 19881 bp
Accession: NZ_LT963404 Location: 89335..109215 Organism: Pseudomonas syringae pv. avii isolate CFBP3846 Replicon: plasmid PP2
Accession: NZ_LT963404 Location: 89335..109215 Organism: Pseudomonas syringae pv. avii isolate CFBP3846 Replicon: plasmid PP2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6H38_RS30165 () | 84900..85328 | + | 429 | WP_011107000.1 | GntR family transcriptional regulator | - |
| C6H38_RS30170 () | 85738..87051 | + | 1314 | WP_060412816.1 | replication initiation protein | - |
| C6H38_RS30175 () | 87235..87549 | + | 315 | WP_060412817.1 | HU family DNA-binding protein | - |
| C6H38_RS30180 () | 87815..88963 | + | 1149 | WP_031598959.1 | ImmA/IrrE family metallo-endopeptidase | - |
| C6H38_RS30185 () | 88950..89291 | + | 342 | Protein_92 | DUF4411 family protein | - |
| C6H38_RS30190 () | 89335..90144 | - | 810 | WP_005741073.1 | IS21 family transposase ISPsy4 | Transposase |
| C6H38_RS30195 () | 90141..91163 | - | 1023 | WP_002551322.1 | IS21 family transposase ISPsy4 | Transposase |
| C6H38_RS30205 () | 91656..91811 | + | 156 | WP_096060180.1 | DUF1508 domain-containing protein | - |
| C6H38_RS30215 () | 92101..92790 | - | 690 | Protein_96 | IS91 family transposase IS801 | Transposase |
| C6H38_RS30225 () | 93626..93850 | + | 225 | WP_044311068.1 | carbon storage regulator | - |
| C6H38_RS30230 () | 93934..95481 | + | 1548 | WP_060412996.1 | glycoside hydrolase family 28 protein | - |
| C6H38_RS30235 () | 95507..95635 | + | 129 | Protein_99 | DUF4113 domain-containing protein | - |
| C6H38_RS30245 () | 96004..96402 | - | 399 | Protein_100 | IS91 family transposase IS801 | Transposase |
| C6H38_RS30250 () | 96790..97123 | - | 334 | Protein_101 | IS91 family transposase IS801 | Transposase |
| C6H38_RS30255 () | 97168..97881 | - | 714 | WP_044311048.1 | UPF0149 family protein | - |
| C6H38_RS30260 () | 97985..98257 | - | 273 | WP_003348606.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6H38_RS30265 () | 98247..98432 | - | 186 | WP_005730485.1 | hypothetical protein | Antitoxin Detail |
| C6H38_RS30270 () | 98483..98761 | - | 279 | WP_003320513.1 | hypothetical protein | - |
| C6H38_RS30275 () | 98854..99489 | - | 636 | WP_103724617.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| C6H38_RS30280 () | 99745..101300 | + | 1556 | WP_103724633.1 | IS3 family transposase IS1240 | Transposase |
| C6H38_RS30290 () | 101869..102350 | + | 482 | Protein_108 | IS3 family transposase ISPsy24 | Transposase |
| C6H38_RS30295 () | 102456..103211 | - | 756 | WP_060402572.1 | IS21 family transposase ISPsy40 | Transposase |
| C6H38_RS30300 () | 103232..104746 | - | 1515 | WP_005740312.1 | IS21 family transposase ISPsy14 | Transposase |
| C6H38_RS30305 () | 104943..105635 | + | 693 | Protein_111 | IS3 family transposase ISPsy24 | Transposase |
| C6H38_RS30310 () | 105764..106045 | - | 282 | WP_004666803.1 | hypothetical protein | - |
| C6H38_RS30315 () | 106045..106728 | - | 684 | WP_057456119.1 | AAA family ATPase | - |
| C6H38_RS30320 () | 106946..107968 | + | 1023 | WP_002551322.1 | IS21 family transposase ISPsy4 | Transposase |
| C6H38_RS30325 () | 107965..108774 | + | 810 | WP_005741073.1 | IS21 family transposase ISPsy4 | Transposase |
| C6H38_RS30330 () | 108823..109206 | - | 384 | Protein_116 | IS91 family transposase IS801 | Transposase |
| C6H38_RS30340 () | 109654..109788 | + | 135 | Protein_117 | IS5/IS1182 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|