MGE detailed information
MGE type: Genomic_island MGE length: 11130 bp
Accession: NZ_LT963402 Location: 5617378..5628507 Organism: Pseudomonas syringae pv. avii isolate CFBP3846 Replicon: chromosome
Accession: NZ_LT963402 Location: 5617378..5628507 Organism: Pseudomonas syringae pv. avii isolate CFBP3846 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6H38_RS26815 () | 5612463..5612804 | + | 342 | WP_080439309.1 | hypothetical protein | - |
| C6H38_RS32580 () | 5612839..5613168 | - | 330 | WP_162496750.1 | hypothetical protein | - |
| C6H38_RS26825 () | 5613106..5613330 | + | 225 | WP_044310806.1 | carbon storage regulator | - |
| C6H38_RS26830 () | 5613602..5614048 | - | 447 | Protein_4972 | NYN domain-containing protein | - |
| C6H38_RS26840 () | 5614152..5614907 | - | 756 | WP_060402572.1 | IS21-like element ISPsy14 family helper ATPase IstB | - |
| C6H38_RS26845 () | 5614928..5616442 | - | 1515 | WP_005740312.1 | IS21 family transposase | - |
| C6H38_RS26850 () | 5616645..5617031 | - | 387 | Protein_4975 | NYN domain-containing protein | - |
| C6H38_RS26855 () | 5617378..5619948 | - | 2571 | WP_060413963.1 | AAA family ATPase | - |
| C6H38_RS26860 () | 5620093..5621055 | - | 963 | WP_060413964.1 | IS91 family transposase ISTha3 | Transposase |
| C6H38_RS26865 () | 5621390..5621638 | + | 249 | WP_002556076.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| C6H38_RS26870 () | 5621651..5622001 | + | 351 | WP_003304103.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6H38_RS26880 () | 5622653..5624038 | - | 1386 | WP_060413965.1 | P-type conjugative transfer protein TrbL | - |
| C6H38_RS26885 () | 5624242..5624691 | - | 450 | Protein_4981 | conjugal transfer protein TrbJ | - |
| C6H38_RS26895 () | 5626361..5626669 | - | 309 | Protein_4983 | conjugal transfer protein TrbJ | - |
| C6H38_RS26900 () | 5626710..5627084 | - | 375 | WP_060413587.1 | conjugal transfer transcriptional regulator TraJ | - |
| C6H38_RS26905 () | 5627413..5627655 | - | 243 | WP_080439380.1 | conjugal transfer protein TraK | - |
| C6H38_RS26910 () | 5627719..5628558 | - | 840 | WP_080439381.1 | helix-turn-helix domain-containing protein | - |
| C6H38_RS26925 () | 5629294..5630203 | - | 910 | Protein_4987 | site-specific integrase | - |
| C6H38_RS26930 () | 5630339..5631148 | - | 810 | WP_005741073.1 | IS21-like element ISPsy4 family helper ATPase IstB | - |
| C6H38_RS26935 () | 5631145..5632167 | - | 1023 | WP_002551322.1 | IS21-like element ISPsy4 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|