MGE detailed information
MGE type: Genomic_island MGE length: 15711 bp
Accession: NZ_LT963402 Location: 5586993..5602703 Organism: Pseudomonas syringae pv. avii isolate CFBP3846 Replicon: chromosome
Accession: NZ_LT963402 Location: 5586993..5602703 Organism: Pseudomonas syringae pv. avii isolate CFBP3846 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6H38_RS26655 () | 5582177..5583016 | + | 840 | Protein_4939 | EAL domain-containing protein | - |
| C6H38_RS26665 () | 5583510..5583695 | + | 186 | WP_080439474.1 | Com family DNA-binding transcriptional regulator | - |
| C6H38_RS26670 () | 5583707..5585002 | + | 1296 | WP_005740412.1 | glycoside hydrolase family 68 protein | - |
| C6H38_RS26675 () | 5585087..5586268 | + | 1182 | WP_005740413.1 | glycoside hydrolase family 10 protein | - |
| C6H38_RS26680 () | 5586993..5587616 | + | 624 | WP_060414154.1 | glycoside hydrolase family 25 protein | - |
| C6H38_RS26685 () | 5588770..5590302 | + | 1533 | WP_060414155.1 | hypothetical protein | - |
| C6H38_RS26690 () | 5590418..5591641 | - | 1224 | WP_044310671.1 | type III secretion system effector HopQ1-1 | - |
| C6H38_RS26695 () | 5591861..5592112 | + | 252 | Protein_4946 | phosphoribulokinase | - |
| C6H38_RS26700 () | 5592437..5593459 | + | 1023 | WP_002551322.1 | IS21 family transposase ISPsy4 | Transposase |
| C6H38_RS26705 () | 5593456..5594265 | + | 810 | WP_005741073.1 | IS21 family transposase ISPsy4 | Transposase |
| C6H38_RS26710 () | 5594314..5594703 | - | 390 | Protein_4949 | hypothetical protein | - |
| C6H38_RS32575 () | 5594749..5595249 | - | 501 | WP_060413859.1 | hypothetical protein | - |
| C6H38_RS26720 () | 5595524..5595991 | + | 468 | WP_005737550.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| C6H38_RS26725 () | 5595988..5596563 | + | 576 | WP_060413860.1 | PIN domain-containing protein | Toxin Detail |
| C6H38_RS26730 () | 5596744..5596995 | + | 252 | WP_054089800.1 | helix-turn-helix domain-containing protein | - |
| C6H38_RS26735 () | 5596995..5597180 | + | 186 | Protein_4954 | HipA N-terminal domain-containing protein | - |
| C6H38_RS26740 () | 5597979..5598548 | + | 570 | Protein_4955 | hypothetical protein ; Integrase | Integrase |
| C6H38_RS26745 () | 5598618..5598893 | + | 276 | WP_025168237.1 | hypothetical protein | - |
| C6H38_RS26750 () | 5598940..5599227 | + | 288 | WP_060413862.1 | hypothetical protein | - |
| C6H38_RS26755 () | 5599208..5600763 | + | 1556 | WP_103724633.1 | IS3 family transposase IS1240 | Transposase |
| C6H38_RS26760 () | 5600837..5601400 | + | 564 | WP_060412766.1 | DUF2971 domain-containing protein | - |
| C6H38_RS26770 () | 5602107..5602703 | + | 597 | WP_060412768.1 | hypothetical protein | - |
| C6H38_RS26780 () | 5604155..5605996 | + | 1842 | WP_080336735.1 | methyl-accepting chemotaxis protein | - |
| C6H38_RS26785 () | 5606062..5607687 | + | 1626 | WP_060413171.1 | methyl-accepting chemotaxis protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|