MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 70589 bp
Accession: NZ_LT963399 Location: 1..70589 Organism: Pseudomonas cerasi isolate PL963 Replicon: plasmid PP4
Accession: NZ_LT963399 Location: 1..70589 Organism: Pseudomonas cerasi isolate PL963 Replicon: plasmid PP4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6H34_RS29320 () | 20..574 | - | 555 | WP_065348595.1 | hypothetical protein | - |
| C6H34_RS29325 () | 1556..2056 | + | 501 | Protein_1 | Protein hcp1 | VF |
| C6H34_RS29330 () | 2079..2606 | + | 528 | WP_004661067.1 | DUF2778 domain-containing protein | - |
| C6H34_RS29340 () | 2996..3364 | + | 369 | WP_080543604.1 | IS66 family transposase ISPpu19 | Transposase |
| C6H34_RS30905 () | 3361..3696 | + | 336 | WP_031598365.1 | IS66 family transposase ISPsy43 | Transposase |
| C6H34_RS31235 () | 3780..3968 | + | 189 | Protein_5 | IS66 family transposase ISPsy43 | Transposase |
| C6H34_RS29355 () | 4111..4500 | + | 390 | WP_080439472.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| C6H34_RS29360 () | 4751..6946 | + | 2196 | WP_005740946.1 | hypothetical protein | - |
| C6H34_RS29370 () | 7648..7782 | + | 135 | Protein_8 | IS5/IS1182 family transposase | - |
| C6H34_RS29375 () | 7803..9416 | - | 1614 | WP_031598748.1 | Methyl-accepting chemotaxis protein CtpH | VF |
| C6H34_RS29380 () | 9600..10220 | - | 621 | WP_065348589.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| C6H34_RS29385 () | 10428..10766 | + | 339 | WP_054071658.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C6H34_RS29390 () | 10766..11053 | + | 288 | WP_002556002.1 | helix-turn-helix domain-containing protein | - |
| C6H34_RS29395 () | 11115..11531 | + | 417 | WP_002556003.1 | hypothetical protein | - |
| C6H34_RS29405 () | 11798..12521 | + | 724 | Protein_14 | hypothetical protein | - |
| C6H34_RS29415 () | 13757..14038 | + | 282 | WP_015062535.1 | hypothetical protein | - |
| C6H34_RS29420 () | 14019..15212 | + | 1194 | Protein_16 | IS91 family transposase IS801 | Transposase |
| C6H34_RS29425 () | 15699..21437 | + | 5739 | WP_162497072.1 | type III effector | - |
| C6H34_RS29430 () | 21638..21910 | - | 273 | WP_003348606.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6H34_RS29435 () | 21900..22085 | - | 186 | WP_005730485.1 | hypothetical protein | Antitoxin Detail |
| C6H34_RS29440 () | 22136..22414 | - | 279 | WP_003320513.1 | hypothetical protein | - |
| C6H34_RS29445 () | 22507..23142 | - | 636 | WP_065348598.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| C6H34_RS29450 () | 23389..24369 | + | 981 | Protein_22 | Y-family DNA polymerase | - |
| C6H34_RS29455 () | 24559..24789 | + | 231 | WP_081591423.1 | DUF4113 domain-containing protein | - |
| C6H34_RS31025 () | 24823..25092 | - | 270 | WP_024421178.1 | hypothetical protein | - |
| C6H34_RS29465 () | 25293..26297 | - | 1005 | WP_005615818.1 | ParB/RepB/Spo0J family partition protein | - |
| C6H34_RS29470 () | 26398..27525 | - | 1128 | WP_065348599.1 | ParA family protein | - |
| C6H34_RS29485 () | 28265..29764 | + | 1500 | WP_104685638.1 | IS21 family transposase ISPsy20 | Transposase |
| C6H34_RS29490 () | 29757..30560 | + | 804 | WP_031598096.1 | IS21 family transposase ISPsy20 | Transposase |
| C6H34_RS29505 () | 31086..31367 | + | 282 | WP_024421360.1 | hypothetical protein | - |
| C6H34_RS29510 () | 31507..33455 | - | 1949 | Protein_30 | hypothetical protein | - |
| C6H34_RS29515 () | 33452..34516 | - | 1065 | WP_024420725.1 | type III secretion system chaperone | - |
| C6H34_RS29520 () | 34979..35320 | + | 342 | WP_083188277.1 | hypothetical protein | - |
| C6H34_RS31030 () | 35355..35684 | - | 330 | WP_162497071.1 | hypothetical protein | - |
| C6H34_RS29530 () | 35622..35846 | + | 225 | WP_044310806.1 | carbon storage regulator | - |
| C6H34_RS29540 () | 36425..37654 | + | 1230 | WP_065348602.1 | IS91 family transposase IS801 | Transposase |
| C6H34_RS29550 () | 37942..38415 | + | 474 | WP_104685829.1 | peptide deformylase | - |
| C6H34_RS29555 () | 38599..38872 | + | 274 | Protein_37 | IS21 family transposase ISPst3 | Transposase |
| C6H34_RS29560 () | 39077..40048 | + | 972 | WP_065348610.1 | isopenicillin N synthase family oxygenase | - |
| C6H34_RS29565 () | 40090..41541 | + | 1452 | WP_065348603.1 | FAD-binding oxidoreductase | - |
| C6H34_RS29570 () | 41585..42080 | + | 496 | Protein_40 | DNA polymerase V subunit UmuC | - |
| C6H34_RS29575 () | 42298..42441 | - | 144 | WP_157893868.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| C6H34_RS29580 () | 42721..43698 | + | 978 | WP_065348561.1 | IS5 family transposase ISPssy | Transposase |
| C6H34_RS29585 () | 43984..44850 | - | 867 | WP_157893869.1 | hypothetical protein | - |
| C6H34_RS29590 () | 44920..45201 | + | 282 | WP_065348597.1 | hypothetical protein | - |
| C6H34_RS29595 () | 45182..46411 | + | 1230 | WP_065348605.1 | IS91 family transposase | - |
| C6H34_RS29605 () | 46594..47115 | - | 522 | Protein_46 | GNAT family N-acetyltransferase | - |
| C6H34_RS29610 () | 47355..47642 | - | 288 | WP_004667956.1 | HU family DNA-binding protein | - |
| C6H34_RS29615 () | 47868..49175 | - | 1308 | WP_065348606.1 | replication initiation protein | - |
| C6H34_RS29620 () | 49536..49733 | - | 198 | WP_010209245.1 | ribbon-helix-helix protein, CopG family | - |
| C6H34_RS29625 () | 49953..50381 | - | 429 | WP_057434187.1 | GntR family transcriptional regulator | - |
| C6H34_RS29630 () | 50569..51132 | - | 564 | WP_065348607.1 | hypothetical protein | - |
| C6H34_RS29635 () | 51284..51807 | - | 524 | Protein_52 | IS5 family transposase ISPs1 | Transposase |
| C6H34_RS29645 () | 52333..52518 | + | 186 | WP_080268116.1 | Com family DNA-binding transcriptional regulator | - |
| C6H34_RS29650 () | 52530..53825 | + | 1296 | WP_065348586.1 | glycoside hydrolase family 68 protein | - |
| C6H34_RS29655 () | 53910..55091 | + | 1182 | WP_011169845.1 | glycoside hydrolase family 10 protein | - |
| C6H34_RS29660 () | 55897..56520 | + | 624 | WP_005771831.1 | glycoside hydrolase family 25 protein | - |
| C6H34_RS29665 () | 57693..59231 | + | 1539 | WP_065348587.1 | type III effector | - |
| C6H34_RS29670 () | 59298..59525 | + | 228 | WP_080268299.1 | phosphoribulokinase | - |
| C6H34_RS29675 () | 59832..60326 | - | 495 | Protein_59 | relaxase | - |
| C6H34_RS29680 () | 60322..60729 | - | 408 | Protein_60 | DUF945 domain-containing protein | - |
| C6H34_RS29685 () | 60776..61154 | - | 379 | Protein_61 | hypothetical protein | - |
| C6H34_RS29695 () | 61614..62030 | - | 417 | WP_002556003.1 | hypothetical protein | - |
| C6H34_RS29700 () | 62092..62379 | - | 288 | WP_002556002.1 | helix-turn-helix domain-containing protein | - |
| C6H34_RS29705 () | 62379..62717 | - | 339 | WP_054071658.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C6H34_RS29710 () | 62925..63545 | + | 621 | WP_065348589.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| C6H34_RS29730 () | 64414..66444 | + | 2031 | WP_065348591.1 | hypothetical protein | - |
| C6H34_RS29735 () | 66907..67221 | + | 315 | Protein_67 | transposase | - |
| C6H34_RS29740 () | 67308..68330 | + | 1023 | WP_002551322.1 | IS21 family transposase ISPsy4 | Transposase |
| C6H34_RS29745 () | 68327..69136 | + | 810 | WP_005741073.1 | IS21 family transposase ISPsy4 | Transposase |
| C6H34_RS29750 () | 69187..69480 | + | 294 | Protein_70 | IS5 family transposase IS52 | Transposase |
| C6H34_RS29755 () | 69626..69847 | - | 222 | WP_065348594.1 | hypothetical protein | - |
| C6H34_RS29760 () | 69885..70298 | - | 414 | WP_060402542.1 | TraR/DksA family transcriptional regulator | - |
| C6H34_RS29765 () | 70334..70558 | - | 225 | WP_060402543.1 | carbon storage regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|