MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 28888 bp
Accession: NZ_LT960612 Location: 10386..39273 Organism: Vibrio tapetis subsp. tapetis isolate Vibrio tapetis CECT4600 Replicon: chromosome
Accession: NZ_LT960612 Location: 10386..39273 Organism: Vibrio tapetis subsp. tapetis isolate Vibrio tapetis CECT4600 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VTAP4600_RS17185 () | 5879..6106 | + | 228 | WP_102524044.1 | hypothetical protein | - |
| VTAP4600_RS17190 () | 6247..12036 | + | 5790 | WP_102524045.1 | conjugative transfer relaxase/helicase TraI | - |
| VTAP4600_RS17195 () | 12055..12414 | - | 360 | WP_102524046.1 | hypothetical protein | - |
| VTAP4600_RS17200 () | 12968..13411 | - | 444 | WP_102524047.1 | hypothetical protein | VF |
| VTAP4600_RS17205 () | 13473..13808 | - | 336 | WP_102524048.1 | type I restriction endonuclease subunit M | - |
| VTAP4600_RS17210 () | 13892..14278 | - | 387 | WP_102524049.1 | hypothetical protein | - |
| VTAP4600_RS17215 () | 14302..14646 | - | 345 | WP_102524050.1 | hypothetical protein | - |
| VTAP4600_RS17220 () | 15352..15561 | - | 210 | WP_102524051.1 | hypothetical protein | - |
| VTAP4600_RS17225 () | 15858..16226 | - | 369 | WP_102524052.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| VTAP4600_RS17230 () | 16150..17325 | - | 1176 | WP_102524053.1 | alanine/ornithine racemase family PLP-dependent enzyme | - |
| VTAP4600_RS17235 () | 17322..18527 | - | 1206 | WP_102524054.1 | DUF1611 domain-containing protein | - |
| VTAP4600_RS17245 () | 18911..20038 | - | 1128 | WP_102524056.1 | HD domain-containing protein | - |
| VTAP4600_RS17250 () | 20161..20427 | - | 267 | WP_102524057.1 | hypothetical protein | - |
| VTAP4600_RS17255 () | 20438..20656 | - | 219 | WP_102524058.1 | hypothetical protein | - |
| VTAP4600_RS17260 () | 20686..21150 | - | 465 | WP_102524059.1 | hypothetical protein | - |
| VTAP4600_RS17270 () | 22135..22536 | - | 402 | WP_102525281.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| VTAP4600_RS17275 () | 22550..22783 | - | 234 | WP_102524061.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| VTAP4600_RS17280 () | 23250..23925 | + | 676 | Protein_22 | SDR family oxidoreductase | - |
| VTAP4600_RS17285 () | 23986..25173 | + | 1188 | WP_102524062.1 | MFS transporter | - |
| VTAP4600_RS17290 () | 25220..26101 | + | 882 | WP_102524063.1 | DoxX family protein | - |
| VTAP4600_RS17295 () | 26192..26758 | + | 567 | Protein_25 | glutaredoxin 2 | - |
| VTAP4600_RS17305 () | 27424..28490 | - | 1067 | Protein_26 | IS91 family transposase ISSde12 | Transposase |
| VTAP4600_RS17310 () | 28487..29374 | - | 888 | WP_102524065.1 | IS91 family transposase ISShvi3 | Transposase |
| VTAP4600_RS17315 () | 29580..29891 | + | 312 | WP_102524066.1 | hypothetical protein | - |
| VTAP4600_RS17325 () | 30564..31049 | + | 486 | Protein_29 | tetratricopeptide repeat protein | - |
| VTAP4600_RS26090 () | 31337..32327 | - | 991 | Protein_30 | methyl-accepting chemotaxis protein | - |
| VTAP4600_RS17335 () | 32362..32889 | - | 528 | WP_102524068.1 | GNAT family N-acetyltransferase | - |
| VTAP4600_RS17340 () | 33161..34299 | - | 1139 | Protein_32 | IS3 family transposase ISSse2 | Transposase |
| VTAP4600_RS17345 () | 35040..35669 | + | 630 | WP_102524069.1 | LysE family translocator | - |
| VTAP4600_RS17350 () | 35807..36379 | + | 573 | WP_102524070.1 | DUF2913 family protein | - |
| VTAP4600_RS17355 () | 36487..36717 | - | 231 | WP_102524071.1 | hypothetical protein | - |
| VTAP4600_RS17360 () | 37120..38286 | - | 1167 | WP_102524072.1 | replication initiation protein | - |
| VTAP4600_RS17365 () | 38291..38584 | - | 294 | WP_102524073.1 | hypothetical protein | - |
| VTAP4600_RS17370 () | 38922..39470 | - | 549 | WP_102524074.1 | phage regulatory CII family protein | - |
| VTAP4600_RS17375 () | 39581..39793 | - | 213 | WP_102524075.1 | hypothetical protein | - |
| VTAP4600_RS17380 () | 39885..40511 | + | 627 | WP_102524076.1 | phage repressor protein CI | - |
| VTAP4600_RS17385 () | 40680..40862 | + | 183 | WP_102524077.1 | hypothetical protein | - |
| VTAP4600_RS17390 () | 40859..41299 | + | 441 | WP_102524078.1 | HNH endonuclease | - |
| VTAP4600_RS17395 () | 41292..43082 | + | 1791 | WP_102524079.1 | ATP-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|