MGE detailed information
MGE type: Prophage MGE length: 26616 bp
Accession: NZ_LT906474 Location: 3578439..3605054 Organism: Escherichia coli strain NCTC122 Replicon: chromosome
Accession: NZ_LT906474 Location: 3578439..3605054 Organism: Escherichia coli strain NCTC122 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CKV98_RS18155 () | 3574711..3575667 | + | 957 | WP_000121328.1 | molybdenum cofactor insertion chaperone PaoD | - |
| CKV98_RS18160 () | 3575847..3576974 | - | 1128 | WP_047403032.1 | MFS transporter | - |
| CKV98_RS18165 () | 3577116..3578174 | - | 1059 | WP_122990176.1 | alpha/beta hydrolase | - |
| CKV98_RS18170 () | 3578439..3579323 | + | 885 | WP_001119037.1 | HTH-type transcriptional regulator PgrR | VF |
| CKV98_RS23710 () | 3579529..3579621 | + | 93 | Protein_3333 | hypothetical protein | - |
| CKV98_RS18185 () | 3580185..3580924 | + | 740 | Protein_3334 | IS3 family transposase IS629 | Transposase |
| CKV98_RS18195 () | 3581597..3583105 | + | 1509 | WP_032206693.1 | group II intron reverse transcriptase/maturase | - |
| CKV98_RS18200 () | 3583195..3583668 | + | 474 | Protein_3336 | IS3 family transposase IS629 | Transposase |
| CKV98_RS18205 () | 3583707..3583886 | - | 180 | Protein_3337 | hypothetical protein | - |
| CKV98_RS18210 () | 3584052..3584774 | - | 723 | WP_081508859.1 | putative oxidoreductase | VF |
| CKV98_RS18215 () | 3584873..3585772 | + | 900 | WP_000687182.1 | HTH-type transcriptional regulator PgrR | VF |
| CKV98_RS18225 () | 3586169..3587098 | - | 930 | WP_047085429.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| CKV98_RS18230 () | 3587085..3587867 | - | 783 | WP_172808160.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| CKV98_RS18235 () | 3588151..3589815 | + | 1665 | Protein_3342 | type I restriction endonuclease subunit R | - |
| CKV98_RS18240 () | 3589881..3591043 | + | 1163 | WP_085947598.1 | IS3 family transposase ISEc17 | Transposase |
| CKV98_RS18245 () | 3591073..3591408 | - | 336 | Protein_3344 | type III restriction endonuclease subunit R | - |
| CKV98_RS18250 () | 3591464..3592161 | + | 698 | Protein_3345 | IS1 family transposase IS1R | Transposase |
| CKV98_RS18260 () | 3592178..3592381 | - | 204 | Protein_3346 | DUF3987 domain-containing protein | - |
| CKV98_RS23965 () | 3592440..3592535 | + | 96 | WP_211180486.1 | putative translational regulatory protein ArgL | - |
| CKV98_RS18265 () | 3592505..3593509 | + | 1005 | WP_001281825.1 | Ornithine carbamoyltransferase subunit F | VF |
| CKV98_RS18270 () | 3593648..3594406 | + | 759 | WP_001121657.1 | DNA-binding transcriptional repressor XynR | - |
| CKV98_RS18275 () | 3594411..3596021 | - | 1611 | WP_000406872.1 | glycoside hydrolase family 43 protein | - |
| CKV98_RS18280 () | 3596033..3597415 | - | 1383 | WP_000192863.1 | MFS transporter | - |
| CKV98_RS18285 () | 3597642..3599609 | - | 1968 | WP_000151261.1 | xylonate dehydratase YagF | - |
| CKV98_RS18290 () | 3599624..3600532 | - | 909 | WP_001136613.1 | 2-keto-3-deoxygluconate aldolase | - |
| CKV98_RS18295 () | 3600827..3601981 | + | 1155 | WP_010723086.1 | IS481 family transposase ISEc19 | Transposase |
| CKV98_RS18300 () | 3602075..3602425 | + | 351 | WP_001030800.1 | type IV toxin-antitoxin system antitoxin YagB | - |
| CKV98_RS18305 () | 3602448..3602696 | + | 249 | Protein_3356 | IS3 family transposase ISEhe3 | Transposase |
| CKV98_RS18310 () | 3602706..3602879 | - | 174 | Protein_3357 | IS30 family transposase | - |
| CKV98_RS18320 () | 3602935..3603632 | + | 698 | Protein_3358 | IS1 family transposase IS1R | Transposase |
| CKV98_RS18330 () | 3603649..3603996 | + | 348 | Protein_3359 | ABC transporter permease subunit | - |
| CKV98_RS18335 () | 3604008..3605054 | + | 1047 | WP_000192349.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| CKV98_RS18340 () | 3605163..3606095 | - | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| CKV98_RS18345 () | 3606082..3607485 | - | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| CKV98_RS18350 () | 3607760..3608971 | - | 1212 | WP_000213416.1 | 3-(3-hydroxy-phenyl)propionate transporter MhpT | - |
| CKV98_RS18355 () | 3609041..3610054 | - | 1014 | WP_081508861.1 | 4-hydroxy-2-oxovalerate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli C | Prophage | TA75075 | NZ_CP020543 | 3579364..3605979 | 0 |