MGE detailed information
MGE type: Genomic_island MGE length: 27160 bp
Accession: NZ_LT905060 Location: 816675..843834 Organism: Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 Replicon: chromosome
Accession: NZ_LT905060 Location: 816675..843834 Organism: Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
CJZ88_RS03960 | 811815..812913 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
CJZ88_RS03965 | 812923..814440 | + | 1518 | WP_000003338.1 | lysine--tRNA ligase | - |
CJZ88_RS03970 | 814516..815061 | - | 546 | WP_000133998.1 | isopentenyl-diphosphate Delta-isomerase | - |
CJZ88_RS03975 | 815326..816084 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
CJZ88_RS03985 | 816372..817991 | + | 1620 | WP_014341476.1 | Primary amine oxidase ; Integrase | Integrase |
CJZ88_RS03990 | 818927..819646 | + | 720 | WP_000082599.1 | Rha family transcriptional regulator | - |
CJZ88_RS03995 | 819650..819853 | + | 204 | WP_000184036.1 | hypothetical protein | - |
CJZ88_RS04000 | 819936..820391 | + | 456 | WP_223229661.1 | hypothetical protein | - |
CJZ88_RS04005 | 820493..821614 | + | 1122 | WP_000028980.1 | hypothetical protein | - |
CJZ88_RS04010 | 822247..823053 | - | 807 | WP_077905073.1 | DUF1460 domain-containing protein | - |
CJZ88_RS04015 | 823328..823579 | - | 252 | WP_001540858.1 | hypothetical protein | - |
CJZ88_RS04020 | 823756..823983 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
CJZ88_RS04025 | 823983..824381 | + | 399 | WP_000911334.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
CJZ88_RS04030 | 825188..825724 | + | 537 | WP_001038500.1 | hypothetical protein | VF |
CJZ88_RS04035 | 825771..826403 | + | 633 | WP_000835268.1 | YfdX family protein | - |
CJZ88_RS04040 | 827122..827703 | + | 582 | WP_001244646.1 | L-arabinose transport system permease protein AraQ | VF |
CJZ88_RS04045 | 827823..830312 | + | 2490 | WP_000705516.1 | hypothetical protein | VF |
CJZ88_RS04050 | 830353..831096 | + | 744 | WP_000798497.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
CJZ88_RS04055 | 831093..832169 | + | 1077 | WP_000141334.1 | hypothetical protein | - |
CJZ88_RS04060 | 832314..832826 | + | 513 | WP_000336256.1 | CaiF/GrlA family transcriptional regulator | - |
CJZ88_RS04065 | 832813..833571 | + | 759 | WP_000134788.1 | transcriptional regulator | - |
CJZ88_RS04070 | 833781..834665 | - | 885 | Protein_796 | nickel/cobalt efflux protein RcnA | - |
CJZ88_RS04075 | 834787..835059 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
CJZ88_RS04080 | 835090..836319 | - | 1230 | WP_000036836.1 | amino acid permease | - |
CJZ88_RS04085 | 836461..836916 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
CJZ88_RS04090 | 837020..837883 | + | 864 | WP_001270764.1 | LysR family transcriptional regulator | - |
CJZ88_RS04095 | 838006..839184 | + | 1179 | WP_000665983.1 | acetyl-CoA C-acetyltransferase | - |
CJZ88_RS04100 | 839614..840450 | + | 837 | WP_000383270.1 | 5-dehydro-4-deoxy-D-glucuronate isomerase | - |
CJZ88_RS04105 | 840505..841266 | + | 762 | WP_000602495.1 | hypothetical protein | VF |
CJZ88_RS04110 | 841620..842519 | + | 900 | Protein_804 | hypothetical protein | VF |
CJZ88_RS04115 | 842626..843834 | + | 1209 | WP_001339175.1 | IS4 family transposase IS10R | Transposase |
CJZ88_RS04120 | 843849..844373 | + | 525 | Protein_806 | arabinose-proton symporter AraE | - |
CJZ88_RS04125 | 844486..845193 | + | 708 | WP_000848628.1 | aspartate/glutamate racemase | - |
CJZ88_RS04130 | 845165..846100 | - | 936 | WP_000741798.1 | LysR family transcriptional regulator | - |
CJZ88_RS04135 | 846218..847480 | + | 1263 | WP_000056585.1 | diaminopimelate decarboxylase | - |
CJZ88_RS04140 | 847490..848512 | - | 1023 | WP_000968342.1 | LacI family DNA-binding transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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