MGE detailed information
MGE type: Prophage MGE length: 55212 bp
Accession: NZ_LT903847 Location: 3637799..3693010 Organism: Escherichia coli O127:H6 isolate EPEC1 Replicon: chromosome
Accession: NZ_LT903847 Location: 3637799..3693010 Organism: Escherichia coli O127:H6 isolate EPEC1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BQ9550_RS19285 () | 3633033..3633971 | - | 939 | WP_000351277.1 | glyoxylate/hydroxypyruvate reductase GhrA | - |
| BQ9550_RS19295 () | 3634441..3635283 | - | 843 | WP_001280481.1 | DUF4942 domain-containing protein | - |
| BQ9550_RS19300 () | 3635368..3635565 | - | 198 | WP_000839282.1 | DUF957 domain-containing protein | - |
| BQ9550_RS19305 () | 3635577..3636068 | - | 492 | WP_000976857.1 | hypothetical protein | - |
| BQ9550_RS19310 () | 3636065..3636439 | - | 375 | WP_000854914.1 | TA system toxin CbtA family protein | - |
| BQ9550_RS19315 () | 3636486..3636860 | - | 375 | WP_001280955.1 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| BQ9550_RS19320 () | 3637023..3637244 | - | 222 | WP_001220314.1 | DUF987 domain-containing protein | - |
| BQ9550_RS19325 () | 3637307..3637783 | - | 477 | WP_001186738.1 | RadC family protein | - |
| BQ9550_RS19330 () | 3637799..3638284 | - | 486 | WP_000214398.1 | antirestriction protein | - |
| BQ9550_RS19335 () | 3638375..3639193 | - | 819 | WP_001234664.1 | DUF945 domain-containing protein | - |
| BQ9550_RS19350 () | 3639533..3640603 | - | 1071 | WP_000102671.1 | patatin-like phospholipase family protein | - |
| BQ9550_RS19355 () | 3640600..3641505 | - | 906 | WP_000203541.1 | chemotaxis protein | - |
| BQ9550_RS19360 () | 3641502..3643886 | - | 2385 | WP_000544657.1 | dynamin family protein | - |
| BQ9550_RS19365 () | 3643985..3645293 | - | 1309 | Protein_3554 | autotransporter adhesin family protein | - |
| BQ9550_RS19370 () | 3645525..3646396 | - | 872 | Protein_3555 | GTPase family protein | - |
| BQ9550_RS19380 () | 3646639..3646896 | + | 258 | Protein_3556 | IS3 family transposase IS911 | Transposase |
| BQ9550_RS26015 () | 3646909..3647052 | - | 144 | Protein_3557 | IS3 family transposase IS911 | Transposase |
| BQ9550_RS19390 () | 3647109..3648322 | + | 1214 | WP_170315999.1 | IS3 family transposase IS629 | Transposase |
| BQ9550_RS19395 () | 3648366..3649372 | - | 1007 | Protein_3559 | IS30 family transposase IS30D | Transposase |
| BQ9550_RS19400 () | 3649502..3651115 | - | 1614 | WP_000080159.1 | IS66 family transposase ISEc47 | Transposase |
| BQ9550_RS26120 () | 3651146..3651244 | - | 99 | Protein_3561 | IS66 family insertion sequence element accessory protein TnpB | - |
| BQ9550_RS19410 () | 3651308..3652470 | + | 1163 | WP_085947603.1 | IS3 family transposase ISEc17 | Transposase |
| BQ9550_RS19420 () | 3653485..3653760 | - | 276 | WP_000762451.1 | hypothetical protein | - |
| BQ9550_RS19425 () | 3653941..3654309 | - | 369 | WP_000013660.1 | hypothetical protein | - |
| BQ9550_RS19435 () | 3655461..3655700 | + | 240 | WP_000343040.1 | hypothetical protein | - |
| BQ9550_RS19440 () | 3655740..3658178 | + | 2439 | WP_000985463.1 | type I restriction-modification system subunit M | - |
| BQ9550_RS19445 () | 3658190..3659539 | + | 1350 | WP_001386438.1 | restriction endonuclease subunit S | - |
| BQ9550_RS19450 () | 3659551..3660207 | + | 657 | WP_000312835.1 | DUF4433 domain-containing protein | Toxin Detail |
| BQ9550_RS19455 () | 3660204..3661271 | + | 1068 | WP_000634203.1 | macro domain-containing protein | Antitoxin Detail |
| BQ9550_RS19460 () | 3661290..3664385 | + | 3096 | WP_000108733.1 | HsdR family type I site-specific deoxyribonuclease | - |
| BQ9550_RS19465 () | 3664385..3665101 | + | 717 | WP_001122107.1 | M48 family metallopeptidase | - |
| BQ9550_RS19470 () | 3665271..3665471 | + | 201 | Protein_3572 | integrase core domain-containing protein | - |
| BQ9550_RS19475 () | 3665929..3666711 | - | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| BQ9550_RS19480 () | 3666708..3667730 | - | 1023 | WP_000255946.1 | IS21 family transposase IS100kyp | Transposase |
| BQ9550_RS19490 () | 3667948..3668959 | + | 1012 | Protein_3575 | transposase | - |
| BQ9550_RS19495 () | 3669030..3669221 | + | 192 | Protein_3576 | IS66 family transposase ISEc23 | Transposase |
| BQ9550_RS19505 () | 3670532..3671071 | - | 540 | Protein_3578 | IS110 family transposase ISEc45 | Transposase |
| BQ9550_RS19510 () | 3671073..3671969 | + | 897 | WP_099467303.1 | hydrogenase | - |
| BQ9550_RS19520 () | 3672219..3672458 | - | 240 | WP_001260398.1 | hypothetical protein | - |
| BQ9550_RS19525 () | 3672611..3673103 | + | 493 | Protein_3581 | IS3 family transposase ISSfl10 | Transposase |
| BQ9550_RS19530 () | 3673157..3673486 | - | 330 | Protein_3582 | DEAD/DEAH box helicase | - |
| BQ9550_RS19535 () | 3673626..3674189 | - | 564 | WP_000282108.1 | inovirus-type Gp2 protein | - |
| BQ9550_RS19540 () | 3675564..3677399 | - | 1836 | WP_001258871.1 | hypothetical protein | - |
| BQ9550_RS19545 () | 3677500..3677787 | + | 288 | WP_000070929.1 | AlpA family transcriptional regulator | - |
| BQ9550_RS19550 () | 3677759..3679288 | + | 1530 | WP_012578871.1 | DUF3987 domain-containing protein | - |
| BQ9550_RS19555 () | 3679458..3680675 | - | 1218 | WP_000279877.1 | hypothetical protein ; Integrase | Integrase |
| BQ9550_RS19560 () | 3680941..3681627 | - | 687 | WP_000009232.1 | DUF2726 domain-containing protein | - |
| BQ9550_RS19565 () | 3682190..3682978 | - | 789 | WP_000533536.1 | phosphate starvation-inducible protein PhoH | - |
| BQ9550_RS19575 () | 3683605..3684876 | - | 1272 | WP_001199145.1 | deferrochelatase/peroxidase EfeB | - |
| BQ9550_RS19580 () | 3684882..3686009 | - | 1128 | WP_000154378.1 | iron uptake system protein EfeO | - |
| BQ9550_RS19585 () | 3686067..3686897 | - | 831 | WP_000497957.1 | FTR1 family protein | - |
| BQ9550_RS19590 () | 3687117..3688625 | - | 1509 | WP_001018494.1 | sodium/proline symporter PutP | - |
| BQ9550_RS19600 () | 3688784..3688993 | - | 210 | WP_000979523.1 | hypothetical protein | - |
| BQ9550_RS19605 () | 3689048..3693010 | + | 3963 | WP_012578870.1 | trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase | - |
| BQ9550_RS19610 () | 3693050..3693688 | - | 639 | WP_000191701.1 | HTH-type transcriptional regulator RutR | - |
| BQ9550_RS19615 () | 3693976..3695067 | + | 1092 | WP_001340066.1 | pyrimidine utilization protein A | - |
| BQ9550_RS19620 () | 3695067..3695759 | + | 693 | WP_001340067.1 | peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB | - |
| BQ9550_RS19625 () | 3695771..3696157 | + | 387 | WP_001126780.1 | pyrimidine utilization protein C | - |
| BQ9550_RS19630 () | 3696165..3696965 | + | 801 | WP_001340068.1 | pyrimidine utilization protein D | - |
| BQ9550_RS19635 () | 3696975..3697565 | + | 591 | WP_001001173.1 | malonic semialdehyde reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|