MGE detailed information
MGE type: Prophage MGE length: 51579 bp
Accession: NZ_LT883142 Location: 2237572..2289150 Organism: Escherichia coli isolate 6666666.257727.embl Replicon: chromosome
Accession: NZ_LT883142 Location: 2237572..2289150 Organism: Escherichia coli isolate 6666666.257727.embl Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EC1094V2_RS13055 () | 2232823..2233533 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| EC1094V2_RS13060 () | 2233536..2234096 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| EC1094V2_RS13065 () | 2234131..2234472 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| EC1094V2_RS13070 () | 2234607..2234933 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| EC1094V2_RS13080 () | 2235139..2236353 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| EC1094V2_RS13085 () | 2236365..2237384 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| EC1094V2_RS13095 () | 2237572..2238852 | - | 1281 | WP_000876979.1 | Putative defective protein IntQ ; Integrase | Integrase |
| EC1094V2_RS13100 () | 2238887..2239138 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| EC1094V2_RS13105 () | 2239211..2241682 | - | 2472 | WP_001515375.1 | exonuclease | - |
| EC1094V2_RS13110 () | 2241776..2241967 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| EC1094V2_RS13115 () | 2241964..2242152 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| EC1094V2_RS13125 () | 2242720..2242938 | - | 219 | WP_001171952.1 | hypothetical protein | - |
| EC1094V2_RS13135 () | 2243098..2243253 | - | 156 | WP_096321526.1 | DUF1391 family protein | - |
| EC1094V2_RS13140 () | 2243420..2243827 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| EC1094V2_RS13145 () | 2243911..2244141 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| EC1094V2_RS13150 () | 2244125..2244604 | + | 480 | WP_096321525.1 | hypothetical protein | - |
| EC1094V2_RS13155 () | 2244609..2245361 | + | 753 | Protein_2098 | hypothetical protein | - |
| EC1094V2_RS27160 () | 2245377..2245439 | + | 63 | Protein_2099 | replication protein | - |
| EC1094V2_RS13160 () | 2245480..2245902 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| EC1094V2_RS13165 () | 2245899..2246255 | + | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| EC1094V2_RS27235 () | 2246866..2247153 | + | 288 | Protein_2102 | hypothetical protein | - |
| EC1094V2_RS13180 () | 2247922..2249262 | + | 1341 | WP_000589013.1 | ISNCY family transposase ISCARN112 | Transposase |
| EC1094V2_RS13190 () | 2249699..2250031 | - | 333 | WP_096321523.1 | FlxA-like family protein | - |
| EC1094V2_RS13195 () | 2250234..2250539 | - | 306 | WP_072134164.1 | hypothetical protein | - |
| EC1094V2_RS13200 () | 2250564..2250803 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| EC1094V2_RS13205 () | 2250803..2251090 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| EC1094V2_RS13210 () | 2251162..2251317 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| EC1094V2_RS13215 () | 2251534..2251785 | + | 252 | WP_001463433.1 | hypothetical protein | - |
| EC1094V2_RS13220 () | 2251852..2252130 | + | 279 | WP_001515373.1 | hypothetical protein | - |
| EC1094V2_RS13225 () | 2252132..2253181 | + | 1050 | WP_001515372.1 | DUF968 domain-containing protein | - |
| EC1094V2_RS13230 () | 2253199..2253576 | + | 378 | WP_001204787.1 | antitermination protein | - |
| EC1094V2_RS13235 () | 2253732..2254256 | - | 525 | WP_000780584.1 | lipocalin family protein | - |
| EC1094V2_RS13240 () | 2254449..2255408 | + | 960 | WP_000592549.1 | DUF523 and DUF1722 domain-containing protein | - |
| EC1094V2_RS13250 () | 2255815..2256528 | + | 714 | WP_001146314.1 | HTH-type transcriptional regulator GadW | VF |
| EC1094V2_RS13255 () | 2256719..2256934 | + | 216 | WP_001515371.1 | phage lysis protein EssD | - |
| EC1094V2_RS13260 () | 2256939..2257253 | + | 315 | WP_001515370.1 | YdfR family protein | - |
| EC1094V2_RS13265 () | 2257309..2257842 | + | 534 | WP_001515369.1 | lysozyme | - |
| EC1094V2_RS13270 () | 2257839..2258336 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| EC1094V2_RS13275 () | 2258698..2258910 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| EC1094V2_RS13280 () | 2258921..2259109 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| EC1094V2_RS26920 () | 2259112..2259177 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| EC1094V2_RS13285 () | 2259256..2259411 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| EC1094V2_RS13290 () | 2259583..2259755 | + | 173 | Protein_2124 | addiction module toxin, GnsA/GnsB family | - |
| EC1094V2_RS13295 () | 2259907..2260317 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| EC1094V2_RS13300 () | 2260375..2260608 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| EC1094V2_RS13310 () | 2260997..2261542 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| EC1094V2_RS13315 () | 2261517..2263442 | + | 1926 | WP_001027297.1 | phage terminase large subunit family protein | - |
| EC1094V2_RS13320 () | 2263439..2263645 | + | 207 | WP_000198149.1 | gpW family protein | - |
| EC1094V2_RS13325 () | 2263642..2265243 | + | 1602 | WP_096321522.1 | phage portal protein | - |
| EC1094V2_RS13330 () | 2265224..2266543 | + | 1320 | WP_000123271.1 | S49 family peptidase | - |
| EC1094V2_RS13335 () | 2266553..2266885 | + | 333 | WP_001299443.1 | head decoration protein | - |
| EC1094V2_RS13340 () | 2266941..2267966 | + | 1026 | WP_000063238.1 | major capsid protein | - |
| EC1094V2_RS13345 () | 2268008..2268403 | + | 396 | WP_000158875.1 | DNA-packaging protein FI | - |
| EC1094V2_RS13350 () | 2268415..2268768 | + | 354 | WP_000785282.1 | head-tail joining protein | - |
| EC1094V2_RS13355 () | 2268780..2269358 | + | 579 | WP_000975081.1 | phage tail protein | - |
| EC1094V2_RS13360 () | 2269355..2269750 | + | 396 | WP_000683129.1 | phage minor tail U family protein | - |
| EC1094V2_RS13365 () | 2269758..2270498 | + | 741 | WP_001361512.1 | phage tail protein | - |
| EC1094V2_RS13370 () | 2270514..2270936 | + | 423 | WP_000479193.1 | phage minor tail protein G | - |
| EC1094V2_RS13375 () | 2270918..2271352 | + | 435 | WP_096321521.1 | phage tail assembly protein T | - |
| EC1094V2_RS13380 () | 2271345..2273924 | + | 2580 | WP_000840337.1 | phage tail tape measure protein | - |
| EC1094V2_RS13385 () | 2273921..2274250 | + | 330 | WP_001543782.1 | phage tail protein | - |
| EC1094V2_RS13390 () | 2274250..2274948 | + | 699 | WP_001152624.1 | phage minor tail protein L | - |
| EC1094V2_RS13395 () | 2274954..2275697 | + | 744 | WP_000194780.1 | C40 family peptidase | - |
| EC1094V2_RS13400 () | 2275634..2276266 | + | 633 | WP_000090891.1 | tail assembly protein | - |
| EC1094V2_RS13405 () | 2276327..2279725 | + | 3399 | WP_016242134.1 | host specificity protein J | - |
| EC1094V2_RS13410 () | 2279792..2280391 | + | 600 | WP_001230352.1 | Outer membrane protein X | VF |
| EC1094V2_RS13415 () | 2280456..2283479 | + | 3024 | WP_024195673.1 | prophage tail fiber N-terminal domain-containing protein | - |
| EC1094V2_RS13420 () | 2283479..2284054 | + | 576 | WP_000885587.1 | tail fiber assembly protein | - |
| EC1094V2_RS13425 () | 2284152..2284742 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| EC1094V2_RS13430 () | 2285059..2285292 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| EC1094V2_RS26925 () | 2285361..2285474 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| EC1094V2_RS13435 () | 2286079..2287362 | + | 1284 | Protein_2153 | MHS family MFS transporter YdfJ | - |
| EC1094V2_RS13440 () | 2287451..2288911 | + | 1461 | WP_000527780.1 | mannitol dehydrogenase family protein | - |
| EC1094V2_RS13445 () | 2288947..2289150 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| EC1094V2_RS13450 () | 2289327..2290013 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| EC1094V2_RS13455 () | 2290102..2290848 | - | 747 | WP_000636568.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| EC1094V2_RS13460 () | 2290985..2293030 | + | 2046 | WP_001515364.1 | peptidyl-dipeptidase Dcp | - |
| EC1094V2_RS13465 () | 2293074..2293592 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|