MGE detailed information
MGE type: IScluster/Tn MGE length: 31367 bp
Accession: NZ_LT883141 Location: 48278..79644 Organism: Escherichia coli isolate 6666666.257727.embl Replicon: plasmid III
Accession: NZ_LT883141 Location: 48278..79644 Organism: Escherichia coli isolate 6666666.257727.embl Replicon: plasmid III
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EC1094V2_RS01140 () | 43432..46053 | - | 2622 | WP_016156502.1 | hypothetical protein | - |
| EC1094V2_RS01150 () | 46739..47101 | + | 363 | WP_000533745.1 | hypothetical protein | - |
| EC1094V2_RS01155 () | 47119..47928 | + | 810 | WP_000654269.1 | hypothetical protein | - |
| EC1094V2_RS01170 () | 49754..51425 | + | 1672 | Protein_45 | DNA repair protein | - |
| EC1094V2_RS01175 () | 51656..51922 | + | 267 | WP_024144810.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| EC1094V2_RS01185 () | 52571..53311 | + | 741 | WP_001515717.1 | tyrosine-type recombinase/integrase | - |
| EC1094V2_RS01195 () | 53781..54761 | - | 981 | Protein_48 | IS5 family transposase ISKpn26 | Transposase |
| EC1094V2_RS01200 () | 55228..56238 | - | 1011 | WP_000200071.1 | RepB family plasmid replication initiator protein | - |
| EC1094V2_RS01215 () | 58171..59337 | + | 1167 | WP_000523813.1 | hypothetical protein | VF |
| EC1094V2_RS01220 () | 59337..60308 | + | 972 | WP_016156498.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| EC1094V2_RS01245 () | 62727..63032 | - | 306 | WP_016156495.1 | hypothetical protein | - |
| EC1094V2_RS01250 () | 63086..63337 | - | 252 | WP_004118488.1 | plasmid stabilization protein | - |
| EC1094V2_RS01255 () | 63416..64675 | - | 1260 | WP_029404075.1 | Y-family DNA polymerase | - |
| EC1094V2_RS01260 () | 64711..65415 | + | 705 | WP_061872725.1 | IS6 family transposase IS15DI | Transposase |
| EC1094V2_RS01265 () | 66155..66364 | + | 210 | WP_020806042.1 | hypothetical protein | - |
| EC1094V2_RS01270 () | 66401..66820 | - | 420 | WP_000990392.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| EC1094V2_RS01275 () | 66817..67128 | - | 312 | WP_000558568.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| EC1094V2_RS01280 () | 67358..70366 | - | 3009 | WP_000718520.1 | Tn3 family transposase ISEc63 | Transposase |
| EC1094V2_RS01285 () | 70525..70857 | + | 333 | Protein_62 | Tn3 family transposase TnpR_Tn3 | Transposase |
| EC1094V2_RS01295 () | 71006..71986 | - | 981 | WP_001567981.1 | IS5 family transposase ISKpn26 | Transposase |
| EC1094V2_RS01300 () | 72299..72988 | - | 690 | WP_016240364.1 | VIT family protein | - |
| EC1094V2_RS01305 () | 73124..73705 | - | 582 | WP_011977760.1 | cytochrome b/b6 domain-containing protein | - |
| EC1094V2_RS01310 () | 74143..74517 | - | 375 | WP_011977761.1 | hypothetical protein | - |
| EC1094V2_RS01315 () | 74629..75582 | - | 954 | WP_001198018.1 | cation diffusion facilitator family transporter | - |
| EC1094V2_RS01325 () | 76980..77246 | - | 267 | WP_061873713.1 | hypothetical protein | - |
| EC1094V2_RS01340 () | 78044..78334 | - | 291 | WP_000648897.1 | hypothetical protein | - |
| EC1094V2_RS01345 () | 78334..79125 | - | 792 | Protein_71 | hypothetical protein | - |
| EC1094V2_RS01350 () | 79141..79838 | - | 698 | Protein_72 | IS1 family transposase IS1S | Transposase |
| EC1094V2_RS01355 () | 79892..81301 | - | 1410 | Protein_73 | hypothetical protein | - |
| EC1094V2_RS01360 () | 81523..82281 | - | 759 | WP_000494510.1 | hypothetical protein | - |
| EC1094V2_RS01365 () | 82293..82784 | - | 492 | WP_000528930.1 | hypothetical protein | - |
| EC1094V2_RS01370 () | 83040..83621 | + | 582 | WP_096321443.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|