MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 79940 bp
Accession: NZ_LT882487 Location: 1..79940 Organism: Salmonella enterica subsp. enterica serovar Typhi isolate 4714STDY6831631 Replicon: plasmid 2
Accession: NZ_LT882487 Location: 1..79940 Organism: Salmonella enterica subsp. enterica serovar Typhi isolate 4714STDY6831631 Replicon: plasmid 2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDZ80_RS24665 () | 1..187 | - | 187 | Protein_0 | IS91 family transposase | - |
| CDZ80_RS24670 () | 397..1257 | - | 861 | WP_000027057.1 | class A broad-spectrum beta-lactamase TEM-1 | - |
| CDZ80_RS24675 () | 1440..1997 | - | 558 | WP_001235713.1 | recombinase family protein | - |
| CDZ80_RS25580 () | 2161..2355 | + | 195 | Protein_3 | DUF4158 domain-containing protein | - |
| CDZ80_RS24685 () | 2561..3823 | + | 1263 | WP_000608644.1 | IS1380-like element ISEc9 family transposase | - |
| CDZ80_RS24690 () | 4079..4954 | + | 876 | WP_000239590.1 | class A extended-spectrum beta-lactamase CTX-M-15 | - |
| CDZ80_RS24695 () | 5001..5333 | - | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| CDZ80_RS24700 () | 5347..8142 | + | 2796 | Protein_7 | Tn3-like element Tn3 family transposase | - |
| CDZ80_RS24705 () | 8185..9200 | - | 1016 | Protein_8 | IS3 family transposase | - |
| CDZ80_RS24710 () | 9595..10251 | + | 657 | WP_001516695.1 | quinolone resistance pentapeptide repeat protein QnrS1 | - |
| CDZ80_RS24715 () | 10570..10998 | - | 429 | Protein_10 | recombinase family protein | - |
| CDZ80_RS24720 () | 11031..12422 | - | 1392 | WP_001493761.1 | ISKra4-like element ISKpn19 family transposase | - |
| CDZ80_RS24725 () | 12459..13031 | - | 573 | WP_001493762.1 | recombinase family protein | - |
| CDZ80_RS24730 () | 13168..13758 | - | 591 | WP_012477564.1 | plasmid pRiA4b ORF-3 family protein | - |
| CDZ80_RS24735 () | 13848..14009 | - | 162 | Protein_14 | type II toxin-antitoxin system mRNA interferase RelE | - |
| CDZ80_RS24740 () | 14009..14248 | - | 240 | WP_000534857.1 | type II toxin-antitoxin system antitoxin RelB | - |
| CDZ80_RS24750 () | 14629..16626 | + | 1998 | WP_005032116.1 | choline BCCT transporter BetT | - |
| CDZ80_RS24760 () | 16690..17967 | + | 1278 | WP_000625667.1 | DUF2254 domain-containing protein | - |
| CDZ80_RS24765 () | 18181..18870 | + | 690 | WP_001764183.1 | hypothetical protein | - |
| CDZ80_RS24770 () | 19214..19918 | + | 705 | WP_001067852.1 | IS6-like element IS26 family transposase | - |
| CDZ80_RS24780 () | 19973..21523 | + | 1551 | Protein_20 | Tn3-like element TnAs1 family transposase | - |
| CDZ80_RS24785 () | 21824..22033 | - | 210 | Protein_21 | transposase | - |
| CDZ80_RS25795 () | 22107..22319 | - | 213 | Protein_22 | 3'-5' exonuclease | - |
| CDZ80_RS24795 () | 22365..22646 | - | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CDZ80_RS24800 () | 22643..22912 | - | 270 | WP_021546940.1 | hypothetical protein | Antitoxin Detail |
| CDZ80_RS24815 () | 23659..24270 | + | 612 | Protein_25 | IS3 family transposase | - |
| CDZ80_RS25530 () | 24302..24481 | - | 180 | WP_012600012.1 | hypothetical protein | - |
| CDZ80_RS25535 () | 24705..25022 | + | 318 | WP_032156934.1 | hypothetical protein | - |
| CDZ80_RS24825 () | 25091..26017 | + | 927 | WP_000617209.1 | WYL domain-containing protein | - |
| CDZ80_RS24830 () | 26027..26626 | + | 600 | WP_001021938.1 | DUF1819 family protein | - |
| CDZ80_RS24835 () | 26623..27207 | + | 585 | WP_000645940.1 | DUF1788 domain-containing protein | - |
| CDZ80_RS24840 () | 27226..30903 | + | 3678 | WP_000687847.1 | BREX system P-loop protein BrxC | - |
| CDZ80_RS24845 () | 30920..32683 | + | 1764 | WP_021546938.1 | DUF262 domain-containing protein | - |
| CDZ80_RS24850 () | 32699..36328 | + | 3630 | WP_021546937.1 | BREX-1 system adenine-specific DNA-methyltransferase PglX | - |
| CDZ80_RS24855 () | 36328..38985 | + | 2658 | WP_004011547.1 | BREX-1 system phosphatase PglZ type A | - |
| CDZ80_RS24860 () | 39047..41092 | + | 2046 | WP_048659818.1 | protease Lon-related BREX system protein BrxL | - |
| CDZ80_RS24865 () | 41200..41478 | - | 279 | Protein_36 | IS3 family transposase | - |
| CDZ80_RS24870 () | 41768..42772 | - | 1005 | WP_021546935.1 | IS110-like element IS4321 family transposase | - |
| CDZ80_RS24880 () | 43077..43774 | + | 698 | Protein_38 | IS1 family transposase | - |
| CDZ80_RS24885 () | 43899..44333 | - | 435 | Protein_39 | GNAT family N-acetyltransferase | - |
| CDZ80_RS24890 () | 44353..44598 | + | 246 | Protein_40 | transposase | - |
| CDZ80_RS24895 () | 44668..45372 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| CDZ80_RS24905 () | 45433..46251 | + | 819 | Protein_42 | transposase | - |
| CDZ80_RS24915 () | 46597..47574 | - | 978 | WP_000600827.1 | tyrosine-type recombinase/integrase | - |
| CDZ80_RS24920 () | 47900..48597 | - | 698 | Protein_44 | IS1 family transposase | - |
| CDZ80_RS24930 () | 48654..49301 | - | 648 | Protein_45 | hypothetical protein | - |
| CDZ80_RS24935 () | 49305..50219 | - | 915 | WP_000891983.1 | response regulator | - |
| CDZ80_RS24940 () | 50533..50841 | + | 309 | WP_000062770.1 | hypothetical protein | - |
| CDZ80_RS24945 () | 50834..51049 | + | 216 | WP_001112907.1 | hypothetical protein | - |
| CDZ80_RS24950 () | 51052..51714 | + | 663 | WP_000958205.1 | lytic transglycosylase domain-containing protein | - |
| CDZ80_RS24955 () | 51725..52024 | + | 300 | WP_000175462.1 | TrbC/VirB2 family protein | - |
| CDZ80_RS24960 () | 52034..54784 | + | 2751 | WP_048659795.1 | VirB3 family type IV secretion system protein | - |
| CDZ80_RS24965 () | 54803..55519 | + | 717 | WP_000770034.1 | type IV secretion system protein | - |
| CDZ80_RS24970 () | 55531..55815 | + | 285 | WP_000769859.1 | EexN family lipoprotein | - |
| CDZ80_RS24975 () | 55833..56840 | + | 1008 | WP_000014166.1 | type IV secretion system protein | - |
| CDZ80_RS25800 () | 56917..57057 | + | 141 | WP_000873539.1 | hypothetical protein | - |
| CDZ80_RS24980 () | 57050..57736 | + | 687 | WP_001293055.1 | type IV secretion system protein | - |
| CDZ80_RS24985 () | 57729..58622 | + | 894 | WP_001045307.1 | P-type conjugative transfer protein VirB9 | - |
| CDZ80_RS24990 () | 58619..59815 | + | 1197 | WP_000980841.1 | TrbI/VirB10 family protein | - |
| CDZ80_RS24995 () | 59819..60868 | + | 1050 | WP_000342114.1 | P-type DNA transfer ATPase VirB11 | - |
| CDZ80_RS25000 () | 60855..61256 | + | 402 | WP_000979494.1 | hypothetical protein | - |
| CDZ80_RS25005 () | 61347..61664 | + | 318 | WP_000683352.1 | hypothetical protein | - |
| CDZ80_RS25010 () | 61691..62026 | + | 336 | WP_000610141.1 | hypothetical protein | - |
| CDZ80_RS25015 () | 62002..62310 | + | 309 | WP_000212005.1 | hypothetical protein | - |
| CDZ80_RS25020 () | 62307..64508 | + | 2202 | WP_023281073.1 | type IA DNA topoisomerase | - |
| CDZ80_RS25025 () | 64505..64897 | + | 393 | WP_001079960.1 | H-NS histone family protein | - |
| CDZ80_RS25030 () | 65606..67513 | + | 1908 | WP_033546593.1 | TraM recognition domain-containing protein | - |
| CDZ80_RS25035 () | 67528..68274 | + | 747 | WP_000909125.1 | hypothetical protein | - |
| CDZ80_RS25040 () | 68267..68794 | + | 528 | WP_048659789.1 | phospholipase D family protein | - |
| CDZ80_RS25045 () | 68826..69257 | - | 432 | WP_001776120.1 | hypothetical protein | - |
| CDZ80_RS25715 () | 69389..69565 | - | 177 | WP_013438824.1 | hypothetical protein | - |
| CDZ80_RS25050 () | 69737..70702 | - | 966 | WP_023281075.1 | DUF1738 domain-containing protein | - |
| CDZ80_RS25805 () | 71154..71264 | + | 111 | Protein_72 | peptidase | - |
| CDZ80_RS25060 () | 71381..71569 | + | 189 | WP_048230572.1 | hypothetical protein | - |
| CDZ80_RS25065 () | 71579..72778 | + | 1200 | WP_000948429.1 | IS91 family transposase | - |
| CDZ80_RS25075 () | 73432..74292 | + | 861 | WP_021546926.1 | replication protein RepA | - |
| CDZ80_RS25080 () | 74692..75897 | + | 1206 | WP_000817632.1 | AAA family ATPase | - |
| CDZ80_RS25085 () | 75894..76859 | + | 966 | WP_000725192.1 | ParB/RepB/Spo0J family partition protein | - |
| CDZ80_RS25720 () | 77124..77379 | + | 256 | Protein_78 | hypothetical protein | - |
| CDZ80_RS25095 () | 77360..78064 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| CDZ80_RS25105 () | 78116..79882 | + | 1767 | Protein_80 | Tn3 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|