MGE detailed information
MGE type: IS/Tn MGE length: 615 bp
Accession: NZ_LT853887 Location: 13805..14419 Organism: Xanthomonas fragariae strain PD5205 Replicon: plasmid pPD5205-21
Accession: NZ_LT853887 Location: 13805..14419 Organism: Xanthomonas fragariae strain PD5205 Replicon: plasmid pPD5205-21
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PD5205_RS21535 () | 8881..9777 | - | 897 | Protein_12 | hypothetical protein | - |
| PD5205_RS21075 () | 9885..10184 | - | 300 | WP_134656643.1 | hypothetical protein | - |
| PD5205_RS20015 () | 10299..10607 | - | 309 | WP_002804321.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PD5205_RS20020 () | 10628..11092 | - | 465 | WP_002804324.1 | hypothetical protein | - |
| PD5205_RS20025 () | 11258..11509 | + | 252 | WP_002804328.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| PD5205_RS20030 () | 11506..11901 | + | 396 | WP_002804329.1 | type II toxin-antitoxin system VapC family toxin | - |
| PD5205_RS21540 () | 11907..12322 | + | 416 | Protein_18 | hypothetical protein | - |
| PD5205_RS20040 () | 12589..12990 | - | 402 | WP_002804331.1 | hypothetical protein | - |
| PD5205_RS21080 () | 13042..13485 | + | 444 | WP_145954081.1 | hypothetical protein | - |
| PD5205_RS21545 () | 13492..13656 | + | 165 | WP_156775378.1 | hypothetical protein | - |
| PD5205_RS20045 () | 13844..14419 | + | 576 | WP_040762337.1 | Tn3 family transposase ISPsy42 | Transposase |
| PD5205_RS20050 () | 14430..14696 | + | 267 | WP_002804333.1 | hypothetical protein | - |
| PD5205_RS20055 () | 14831..16546 | + | 1716 | WP_083215115.1 | AAA family ATPase | - |
| PD5205_RS20060 () | 16615..16797 | + | 183 | WP_134656646.1 | hypothetical protein | - |
| PD5205_RS20065 () | 16983..17267 | - | 285 | WP_002804295.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PD5205_RS20070 () | 17255..17533 | - | 279 | WP_002804296.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| PD5205_RS21650 () | 17817..18365 | + | 549 | WP_002804297.1 | hypothetical protein | - |
| PD5205_RS20080 () | 18355..19002 | + | 648 | WP_002804298.1 | recombinase family protein | - |
| PD5205_RS21550 () | 18999..19136 | + | 138 | WP_167699514.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|