MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 20830 bp
Accession: NZ_LT853887 Location: 1..20830 Organism: Xanthomonas fragariae strain PD5205 Replicon: plasmid pPD5205-21
Accession: NZ_LT853887 Location: 1..20830 Organism: Xanthomonas fragariae strain PD5205 Replicon: plasmid pPD5205-21
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Location: 1..1410 (1410 bp)
Type: Others
Protein ID: WP_002804302.1
Type: Others
Protein ID: WP_002804302.1
Location: 1592..1849 (258 bp)
Type: Others
Protein ID: WP_040762330.1
Type: Others
Protein ID: WP_040762330.1
Location: 6120..6518 (399 bp)
Type: Others
Protein ID: WP_108772809.1
Type: Others
Protein ID: WP_108772809.1
Location: 6515..7124 (610 bp)
Type: Transposase
Protein ID: Protein_8
Type: Transposase
Protein ID: Protein_8
Location: 7167..7442 (276 bp)
Type: Others
Protein ID: Protein_9
Type: Others
Protein ID: Protein_9
Location: 11258..11509 (252 bp)
Type: Others
Protein ID: WP_002804328.1
Type: Others
Protein ID: WP_002804328.1
Location: 11506..11901 (396 bp)
Type: Others
Protein ID: WP_002804329.1
Type: Others
Protein ID: WP_002804329.1
Location: 11907..12322 (416 bp)
Type: Others
Protein ID: Protein_18
Type: Others
Protein ID: Protein_18
Location: 13042..13485 (444 bp)
Type: Others
Protein ID: WP_145954081.1
Type: Others
Protein ID: WP_145954081.1
Location: 13492..13656 (165 bp)
Type: Others
Protein ID: WP_156775378.1
Type: Others
Protein ID: WP_156775378.1
Location: 13844..14419 (576 bp)
Type: Transposase
Protein ID: WP_040762337.1
Type: Transposase
Protein ID: WP_040762337.1
Location: 14430..14696 (267 bp)
Type: Others
Protein ID: WP_002804333.1
Type: Others
Protein ID: WP_002804333.1
Location: 14831..16546 (1716 bp)
Type: Others
Protein ID: WP_083215115.1
Type: Others
Protein ID: WP_083215115.1
Location: 16615..16797 (183 bp)
Type: Others
Protein ID: WP_134656646.1
Type: Others
Protein ID: WP_134656646.1
Location: 17817..18365 (549 bp)
Type: Others
Protein ID: WP_002804297.1
Type: Others
Protein ID: WP_002804297.1
Location: 18355..19002 (648 bp)
Type: Transposase
Protein ID: WP_002804298.1
Type: Transposase
Protein ID: WP_002804298.1
Location: 18999..19136 (138 bp)
Type: Others
Protein ID: WP_167699514.1
Type: Others
Protein ID: WP_167699514.1
Location: 19246..19865 (620 bp)
Type: Others
Protein ID: Protein_31
Type: Others
Protein ID: Protein_31
Location: 19869..20231 (363 bp)
Type: Others
Protein ID: WP_002804300.1
Type: Others
Protein ID: WP_002804300.1
Location: 20314..20637 (324 bp)
Type: Others
Protein ID: WP_002804301.1
Type: Others
Protein ID: WP_002804301.1
Location: 1896..2123 (228 bp)
Type: Others
Protein ID: WP_156775377.1
Type: Others
Protein ID: WP_156775377.1
Location: 2508..4856 (2349 bp)
Type: Others
Protein ID: Protein_3
Type: Others
Protein ID: Protein_3
Location: 4942..5196 (255 bp)
Type: Others
Protein ID: WP_002804309.1
Type: Others
Protein ID: WP_002804309.1
Location: 5209..5325 (117 bp)
Type: Others
Protein ID: WP_082244203.1
Type: Others
Protein ID: WP_082244203.1
Location: 5430..5729 (300 bp)
Type: Others
Protein ID: WP_002804311.1
Type: Others
Protein ID: WP_002804311.1
Location: 7444..7872 (429 bp)
Type: Others
Protein ID: WP_002804319.1
Type: Others
Protein ID: WP_002804319.1
Location: 8473..8652 (180 bp)
Type: Others
Protein ID: Protein_11
Type: Others
Protein ID: Protein_11
Location: 8881..9777 (897 bp)
Type: Others
Protein ID: Protein_12
Type: Others
Protein ID: Protein_12
Location: 9885..10184 (300 bp)
Type: Others
Protein ID: WP_134656643.1
Type: Others
Protein ID: WP_134656643.1
Location: 10299..10607 (309 bp)
Type: Others
Protein ID: WP_002804321.1
Type: Others
Protein ID: WP_002804321.1
Location: 10628..11092 (465 bp)
Type: Others
Protein ID: WP_002804324.1
Type: Others
Protein ID: WP_002804324.1
Location: 12589..12990 (402 bp)
Type: Others
Protein ID: WP_002804331.1
Type: Others
Protein ID: WP_002804331.1
Location: 16983..17267 (285 bp)
Type: Toxin
Protein ID: WP_002804295.1
Type: Toxin
Protein ID: WP_002804295.1
Location: 17255..17533 (279 bp)
Type: Antitoxin
Protein ID: WP_002804296.1
Type: Antitoxin
Protein ID: WP_002804296.1
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Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PD5205_RS21645 () | 1..1410 | + | 1410 | WP_002804302.1 | hypothetical protein | - |
| PD5205_RS19935 () | 1592..1849 | + | 258 | WP_040762330.1 | hypothetical protein | - |
| PD5205_RS19940 () | 1896..2123 | - | 228 | WP_156775377.1 | hypothetical protein | - |
| PD5205_RS21055 () | 2508..4856 | - | 2349 | Protein_3 | type IV secretory system conjugative DNA transfer family protein | - |
| PD5205_RS19955 () | 4942..5196 | - | 255 | WP_002804309.1 | hypothetical protein | - |
| PD5205_RS19960 () | 5209..5325 | - | 117 | WP_082244203.1 | type I toxin-antitoxin system ptaRNA1 family toxin | - |
| PD5205_RS19970 () | 5430..5729 | - | 300 | WP_002804311.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| PD5205_RS19975 () | 6120..6518 | + | 399 | WP_108772809.1 | antitoxin VbhA family protein | - |
| PD5205_RS19980 () | 6515..7124 | + | 610 | Protein_8 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| PD5205_RS19985 () | 7167..7442 | + | 276 | Protein_9 | ParA family protein | - |
| PD5205_RS19990 () | 7444..7872 | - | 429 | WP_002804319.1 | DUF3757 domain-containing protein | - |
| PD5205_RS20000 () | 8473..8652 | - | 180 | Protein_11 | hypothetical protein | - |
| PD5205_RS21535 () | 8881..9777 | - | 897 | Protein_12 | hypothetical protein | - |
| PD5205_RS21075 () | 9885..10184 | - | 300 | WP_134656643.1 | hypothetical protein | - |
| PD5205_RS20015 () | 10299..10607 | - | 309 | WP_002804321.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PD5205_RS20020 () | 10628..11092 | - | 465 | WP_002804324.1 | hypothetical protein | - |
| PD5205_RS20025 () | 11258..11509 | + | 252 | WP_002804328.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| PD5205_RS20030 () | 11506..11901 | + | 396 | WP_002804329.1 | type II toxin-antitoxin system VapC family toxin | - |
| PD5205_RS21540 () | 11907..12322 | + | 416 | Protein_18 | hypothetical protein | - |
| PD5205_RS20040 () | 12589..12990 | - | 402 | WP_002804331.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
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Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| No matching records found | ||||||