MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 30469 bp
Accession: NZ_LT853886 Location: 1..30469 Organism: Xanthomonas fragariae strain PD5205 Replicon: plasmid pPD5205-30
Accession: NZ_LT853886 Location: 1..30469 Organism: Xanthomonas fragariae strain PD5205 Replicon: plasmid pPD5205-30
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PD5205_RS19740 () | 1..876 | + | 876 | WP_002805689.1 | putative trfa-related protein | - |
| PD5205_RS19745 () | 1535..1849 | + | 315 | WP_065975497.1 | transcriptional regulator KorA | - |
| PD5205_RS19750 () | 1860..2660 | + | 801 | WP_065975496.1 | ParA family protein | - |
| PD5205_RS19755 () | 2653..3705 | + | 1053 | WP_065975495.1 | ParB/RepB/Spo0J family partition protein | - |
| PD5205_RS19760 () | 3692..3961 | + | 270 | WP_145954078.1 | hypothetical protein | - |
| PD5205_RS19765 () | 4087..5231 | + | 1145 | WP_088079903.1 | IS3 family transposase ISXac3 | Transposase |
| PD5205_RS19770 () | 5407..5700 | + | 294 | WP_002805642.1 | hypothetical protein | - |
| PD5205_RS19775 () | 5687..6208 | + | 522 | WP_159088358.1 | hypothetical protein | - |
| PD5205_RS19780 () | 6472..7023 | + | 552 | WP_065975505.1 | hypothetical protein | Relaxase |
| PD5205_RS19785 () | 7010..8029 | + | 1020 | WP_052032118.1 | hypothetical protein | Relaxase |
| PD5205_RS19795 () | 8687..9286 | + | 600 | WP_065975504.1 | hypothetical protein | - |
| PD5205_RS19805 () | 9790..10542 | - | 753 | WP_065975503.1 | hypothetical protein | - |
| PD5205_RS19810 () | 10763..10987 | + | 225 | WP_002805375.1 | hypothetical protein | - |
| PD5205_RS21525 () | 10984..11160 | - | 177 | WP_156775376.1 | hypothetical protein | - |
| PD5205_RS19815 () | 11238..11531 | - | 294 | WP_002805372.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PD5205_RS19820 () | 11518..11817 | - | 300 | WP_002805369.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| PD5205_RS19830 () | 12296..12721 | + | 426 | WP_167699513.1 | antitoxin VbhA family protein | - |
| PD5205_RS19835 () | 12763..13338 | + | 576 | WP_065975506.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| PD5205_RS19840 () | 13499..13768 | - | 270 | WP_052032117.1 | DUF3717 domain-containing protein | - |
| PD5205_RS19845 () | 13765..14388 | - | 624 | WP_002805358.1 | transglycosylase SLT domain-containing protein | - |
| PD5205_RS19850 () | 14385..16229 | - | 1845 | WP_065975501.1 | hypothetical protein | - |
| PD5205_RS19855 () | 16242..18161 | - | 1920 | WP_065975500.1 | Conjugal transfer protein TraG | VF |
| PD5205_RS19860 () | 18175..19236 | - | 1062 | WP_002805320.1 | Type IV secretion system protein VirB11 | VF |
| PD5205_RS19865 () | 19236..20450 | - | 1215 | WP_002805319.1 | Type IV secretion system protein virB10 | VF |
| PD5205_RS19870 () | 20447..21256 | - | 810 | WP_082244228.1 | Type IV secretion system protein virB9 | VF |
| PD5205_RS19875 () | 21253..22131 | - | 879 | WP_002805316.1 | Type IV secretion system protein virB8 | VF |
| PD5205_RS19880 () | 22430..23380 | - | 951 | WP_002805314.1 | Type IV secretion system protein VirB6 | VF |
| PD5205_RS19885 () | 23392..23685 | - | 294 | WP_002805313.1 | EexN family lipoprotein | - |
| PD5205_RS19890 () | 23700..24410 | - | 711 | WP_002805311.1 | type IV secretion system protein | - |
| PD5205_RS19895 () | 24407..26848 | - | 2442 | WP_065975499.1 | Type IV secretion system protein virB4 | VF |
| PD5205_RS19900 () | 26848..27210 | - | 363 | WP_002805102.1 | Type IV secretion system protein virB3 | VF |
| PD5205_RS19905 () | 27224..27493 | - | 270 | WP_040762489.1 | TrbC/VirB2 family protein | - |
| PD5205_RS19910 () | 27544..27804 | - | 261 | WP_145954080.1 | hypothetical protein | - |
| PD5205_RS19915 () | 27971..28432 | - | 462 | WP_002805097.1 | hypothetical protein | - |
| PD5205_RS19920 () | 28473..29381 | - | 909 | WP_002805094.1 | DUF3991 and TOPRIM domain-containing protein | - |
| PD5205_RS19925 () | 29616..30221 | + | 606 | WP_065975498.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|