MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 21045 bp
Accession: NZ_LT853881 Location: 1..21045 Organism: Xanthomonas fragariae strain NBC2815 Replicon: plasmid pNBC2815-21
Accession: NZ_LT853881 Location: 1..21045 Organism: Xanthomonas fragariae strain NBC2815 Replicon: plasmid pNBC2815-21
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBC2815_RS19710 () | 1..1410 | + | 1410 | WP_088062696.1 | replication protein | - |
| NBC2815_RS19715 () | 1710..1950 | + | 241 | Protein_1 | hypothetical protein | - |
| NBC2815_RS19720 () | 1997..2257 | - | 261 | WP_002804304.1 | hypothetical protein | - |
| NBC2815_RS19725 () | 2609..3932 | - | 1324 | Protein_3 | type IV secretory system conjugative DNA transfer family protein | - |
| NBC2815_RS19730 () | 3952..5055 | - | 1104 | WP_134656647.1 | hypothetical protein | - |
| NBC2815_RS19735 () | 5141..5395 | - | 255 | WP_088062700.1 | hypothetical protein | - |
| NBC2815_RS19740 () | 5408..5524 | - | 117 | WP_082244203.1 | type I toxin-antitoxin system ptaRNA1 family toxin | - |
| NBC2815_RS19750 () | 5629..5928 | - | 300 | WP_002804311.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| NBC2815_RS19755 () | 6319..6717 | + | 399 | WP_108772809.1 | antitoxin VbhA family protein | - |
| NBC2815_RS19760 () | 6714..7322 | + | 609 | WP_088062702.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| NBC2815_RS19765 () | 7365..7640 | + | 276 | Protein_10 | ParA family protein | - |
| NBC2815_RS19770 () | 7642..8070 | - | 429 | WP_002804319.1 | DUF3757 domain-containing protein | - |
| NBC2815_RS19780 () | 8671..8850 | - | 180 | Protein_12 | hypothetical protein | - |
| NBC2815_RS21085 () | 9055..10128 | - | 1074 | Protein_13 | hypothetical protein | - |
| NBC2815_RS20765 () | 10083..10382 | - | 300 | WP_134656643.1 | hypothetical protein | - |
| NBC2815_RS19790 () | 10497..10805 | - | 309 | WP_088062704.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NBC2815_RS19795 () | 10826..11290 | - | 465 | WP_002804324.1 | hypothetical protein | - |
| NBC2815_RS19800 () | 11456..11707 | + | 252 | WP_002804328.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| NBC2815_RS19805 () | 11704..12099 | + | 396 | WP_002804329.1 | type II toxin-antitoxin system VapC family toxin | - |
| NBC2815_RS21090 () | 12105..12520 | + | 416 | Protein_19 | hypothetical protein | - |
| NBC2815_RS19815 () | 12787..13188 | - | 402 | WP_088062707.1 | hypothetical protein | - |
| NBC2815_RS20770 () | 13240..13683 | + | 444 | WP_134656644.1 | hypothetical protein | - |
| NBC2815_RS21095 () | 13690..13854 | + | 165 | WP_156775378.1 | hypothetical protein | - |
| NBC2815_RS19820 () | 14042..14617 | + | 576 | WP_040762337.1 | Tn3 family transposase ISPsy42 | Transposase |
| NBC2815_RS19825 () | 14628..14894 | + | 267 | WP_002804333.1 | hypothetical protein | - |
| NBC2815_RS19830 () | 15040..16725 | + | 1686 | WP_088062709.1 | AAA family ATPase | - |
| NBC2815_RS19835 () | 16834..17016 | + | 183 | WP_134656646.1 | hypothetical protein | - |
| NBC2815_RS19840 () | 17193..17486 | - | 294 | WP_088062711.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NBC2815_RS19845 () | 17474..17752 | - | 279 | WP_002804296.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| NBC2815_RS21200 () | 18030..18578 | + | 549 | WP_002804297.1 | hypothetical protein | - |
| NBC2815_RS19855 () | 18568..19215 | + | 648 | WP_002804298.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| NBC2815_RS21100 () | 19212..19349 | + | 138 | WP_167699514.1 | hypothetical protein | - |
| NBC2815_RS19860 () | 19459..20091 | + | 633 | WP_002804299.1 | ParA family protein | - |
| NBC2815_RS19865 () | 20084..20446 | + | 363 | WP_002804300.1 | hypothetical protein | - |
| NBC2815_RS19870 () | 20529..20852 | + | 324 | WP_002804301.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|