MGE detailed information
MGE type: IScluster/Tn MGE length: 16079 bp
Accession: NZ_LT853880 Location: 232928..249006 Organism: Xanthomonas fragariae strain NBC2815 Replicon: chromosome
Accession: NZ_LT853880 Location: 232928..249006 Organism: Xanthomonas fragariae strain NBC2815 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBC2815_RS00980 () | 230126..231649 | + | 1524 | WP_002808463.1 | catalase KatB | - |
| NBC2815_RS00985 () | 231709..232284 | + | 576 | WP_002808462.1 | ankyrin repeat domain-containing protein | - |
| NBC2815_RS00990 () | 232812..234163 | + | 1352 | Protein_185 | IS5 family transposase IS1478 | Transposase |
| NBC2815_RS00995 () | 234307..235674 | + | 1368 | Protein_186 | IS5 family transposase IS1478 | Transposase |
| NBC2815_RS01000 () | 235702..235950 | + | 249 | WP_159094209.1 | hypothetical protein | VF |
| NBC2815_RS21105 () | 236044..236595 | + | 552 | WP_197685846.1 | hypothetical protein | - |
| NBC2815_RS01010 () | 236689..237804 | + | 1116 | WP_002809491.1 | alpha/beta fold hydrolase | - |
| NBC2815_RS01015 () | 237864..238773 | - | 910 | Protein_190 | EamA family transporter RarD | - |
| NBC2815_RS01020 () | 238789..239393 | - | 605 | Protein_191 | drug/metabolite exporter YedA | - |
| NBC2815_RS01025 () | 239581..240379 | + | 799 | WP_087946428.1 | IS5 family transposase IS1480b | Transposase |
| NBC2815_RS01030 () | 240406..240606 | - | 201 | Protein_193 | peptidase M20 | - |
| NBC2815_RS01035 () | 240789..242078 | - | 1290 | WP_002809514.1 | tryptophan--tRNA ligase | - |
| NBC2815_RS01040 () | 242727..242728 | - | 2 | WP_087946428.1 | IS5 family transposase | - |
| NBC2815_RS01045 () | 243259..243393 | - | 135 | WP_002809516.1 | entericidin A/B family lipoprotein | Toxin Detail |
| NBC2815_RS01050 () | 243473..243625 | - | 153 | WP_002809518.1 | entericidin A/B family lipoprotein | Antitoxin Detail |
| NBC2815_RS01055 () | 243734..244657 | - | 924 | WP_088060874.1 | arginase | - |
| NBC2815_RS01060 () | 245015..245408 | + | 394 | Protein_199 | roadblock/LC7 domain-containing protein | - |
| NBC2815_RS01065 () | 245431..245661 | + | 231 | Protein_200 | GTPase | - |
| NBC2815_RS01070 () | 247203..247204 | - | 2 | WP_088060875.1 | IS5 family transposase | - |
| NBC2815_RS01075 () | 247639..249006 | + | 1368 | WP_088060876.1 | IS5 family transposase IS1478 | Transposase |
| NBC2815_RS01080 () | 249040..249723 | - | 684 | WP_088060877.1 | dTMP kinase | - |
| NBC2815_RS19920 () | 250307..250681 | - | 375 | Protein_204 | hypothetical protein | - |
| NBC2815_RS01090 () | 250702..252070 | - | 1369 | Protein_205 | IS5 family transposase | - |
| NBC2815_RS01095 () | 252344..252877 | - | 534 | WP_002809530.1 | cytochrome b | - |
| NBC2815_RS01100 () | 252874..253971 | - | 1098 | WP_002809533.1 | catalase family peroxidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|