MGE detailed information
MGE type: Conjugative plasmid MGE length: 83831 bp
Accession: NZ_LT838204 Location: 1..83831 Organism: Escherichia coli isolate WI2 isolate Replicon: plasmid pWI2-incI1
Accession: NZ_LT838204 Location: 1..83831 Organism: Escherichia coli isolate WI2 isolate Replicon: plasmid pWI2-incI1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DSZ51_RS25860 () | 65..1219 | + | 1155 | WP_001139957.1 | integrase | - |
| DSZ51_RS25865 () | 1370..2194 | + | 825 | WP_001238939.1 | hypothetical protein | - |
| DSZ51_RS25870 () | 2279..3481 | + | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| DSZ51_RS25875 () | 3541..4125 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| DSZ51_RS25880 () | 4520..4978 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| DSZ51_RS25885 () | 4975..5793 | + | 819 | WP_000646098.1 | hypothetical protein | VF |
| DSZ51_RS25890 () | 5790..6938 | + | 1149 | WP_001024972.1 | putative protein YggR | VF |
| DSZ51_RS25895 () | 6935..7225 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| DSZ51_RS25900 () | 7240..7791 | + | 552 | WP_000014583.1 | Phospholipase D | VF |
| DSZ51_RS25905 () | 7881..11648 | + | 3768 | WP_044707317.1 | DNA primase | - |
| DSZ51_RS25910 () | 11666..12013 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| DSZ51_RS25915 () | 12010..12702 | + | 693 | WP_000138548.1 | DotI/IcmL family type IV secretion protein | - |
| DSZ51_RS25920 () | 12713..13696 | + | 984 | WP_001191877.1 | hypothetical protein | VF |
| DSZ51_RS25925 () | 13699..14988 | + | 1290 | WP_001272005.1 | conjugal transfer protein TraO | - |
| DSZ51_RS25930 () | 14988..15692 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| DSZ51_RS25935 () | 15692..16219 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| DSZ51_RS25940 () | 16270..16674 | + | 405 | WP_000086957.1 | IncI1-type conjugal transfer protein TraR | - |
| DSZ51_RS25945 () | 16738..16926 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| DSZ51_RS25950 () | 16910..17710 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| DSZ51_RS25955 () | 17800..20844 | + | 3045 | WP_001024780.1 | IncI1-type conjugal transfer protein TraU | - |
| DSZ51_RS25960 () | 20844..21458 | + | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| DSZ51_RS25965 () | 21425..22627 | + | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| DSZ51_RS25970 () | 22656..23240 | + | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| DSZ51_RS25975 () | 23337..25499 | + | 2163 | WP_000698351.1 | DotA/TraY family protein | - |
| DSZ51_RS25980 () | 25564..26226 | + | 663 | WP_000653333.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| DSZ51_RS25985 () | 26298..26507 | - | 210 | WP_000062602.1 | HEAT repeat domain-containing protein | - |
| DSZ51_RS26860 () | 26850..27026 | + | 177 | WP_001054898.1 | hypothetical protein | - |
| DSZ51_RS25990 () | 27685..27936 | + | 252 | WP_001291967.1 | hypothetical protein | - |
| DSZ51_RS25995 () | 28008..28160 | - | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| - () | 28215..28272 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 28215..28272 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 28215..28272 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 28215..28272 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| DSZ51_RS26000 () | 28452..29660 | + | 1209 | WP_001303305.1 | IncI1-type conjugal transfer protein TrbA | - |
| DSZ51_RS26005 () | 29679..30749 | + | 1071 | WP_085543303.1 | IncI1-type conjugal transfer protein TrbB | - |
| DSZ51_RS26010 () | 30742..33033 | + | 2292 | WP_001289276.1 | hypothetical protein | - |
| DSZ51_RS26015 () | 33070..35769 | - | 2700 | WP_001405892.1 | hypothetical protein | Relaxase |
| DSZ51_RS26020 () | 35780..36112 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| DSZ51_RS26025 () | 36346..36681 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| DSZ51_RS26030 () | 36767..37615 | - | 849 | WP_001077023.1 | DUF4942 domain-containing protein | - |
| DSZ51_RS26045 () | 38199..38450 | + | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| DSZ51_RS26050 () | 38481..38678 | - | 198 | WP_001348086.1 | hypothetical protein | - |
| DSZ51_RS26055 () | 38701..39639 | - | 939 | WP_085543304.1 | ISNCY family transposase ISRor2 | VF |
| DSZ51_RS26060 () | 39704..39970 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| DSZ51_RS26065 () | 40064..40498 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| DSZ51_RS26080 () | 41227..41727 | - | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| DSZ51_RS26090 () | 42190..42786 | - | 597 | WP_000978012.1 | hypothetical protein | - |
| DSZ51_RS26095 () | 42783..43502 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| DSZ51_RS26100 () | 43499..43933 | - | 435 | WP_000845904.1 | conjugation system SOS inhibitor PsiB | - |
| DSZ51_RS26105 () | 43988..45946 | - | 1959 | WP_145951870.1 | ParB/RepB/Spo0J family partition protein | - |
| DSZ51_RS26110 () | 46005..46238 | - | 234 | WP_021564200.1 | DUF905 family protein | - |
| DSZ51_RS26115 () | 46296..46823 | - | 528 | WP_001276114.1 | single-stranded DNA-binding protein | - |
| DSZ51_RS26940 () | 47189..47263 | + | 75 | Protein_48 | pilus protein | - |
| DSZ51_RS26130 () | 47595..47786 | - | 192 | WP_085543307.1 | hypothetical protein | - |
| DSZ51_RS26135 () | 47783..48205 | - | 423 | WP_085543290.1 | DUF1380 family protein | - |
| DSZ51_RS26140 () | 48252..48554 | - | 303 | WP_074518990.1 | antirestriction protein | - |
| DSZ51_RS26945 () | 49093..49863 | - | 771 | WP_042957730.1 | hypothetical protein | - |
| DSZ51_RS26155 () | 49913..50347 | - | 435 | WP_085543308.1 | DUF1380 family protein | - |
| DSZ51_RS26160 () | 50360..50581 | - | 222 | WP_021560304.1 | hypothetical protein | - |
| DSZ51_RS26165 () | 50582..51265 | - | 684 | WP_085543309.1 | DNA methylase | - |
| DSZ51_RS26170 () | 51341..51652 | - | 312 | WP_032147121.1 | hypothetical protein | - |
| DSZ51_RS26175 () | 51855..52817 | + | 963 | WP_000959879.1 | plasmid segregation protein ParM | - |
| DSZ51_RS26180 () | 52820..53170 | + | 351 | WP_024185881.1 | plasmid partitioning/stability family protein | - |
| DSZ51_RS26185 () | 53322..53834 | - | 513 | WP_021561682.1 | hypothetical protein | - |
| DSZ51_RS26190 () | 54275..55810 | + | 1536 | WP_033805281.1 | pore-forming bacteriocin colicin B | - |
| DSZ51_RS26195 () | 55828..56355 | - | 528 | WP_000203287.1 | colicin B immunity protein | - |
| DSZ51_RS26205 () | 56599..57414 | + | 816 | WP_000449473.1 | lipid II-degrading bacteriocin colicin M | - |
| DSZ51_RS26210 () | 57464..57817 | - | 354 | WP_000864806.1 | colicin M immunity protein | - |
| DSZ51_RS26215 () | 57989..58771 | - | 783 | WP_085543310.1 | site-specific integrase | - |
| DSZ51_RS26220 () | 58773..59186 | - | 414 | WP_016230899.1 | hypothetical protein | - |
| DSZ51_RS26230 () | 59756..60013 | + | 258 | WP_000343101.1 | hypothetical protein | - |
| DSZ51_RS26235 () | 60013..60603 | + | 591 | WP_000198612.1 | hypothetical protein | - |
| DSZ51_RS26240 () | 60621..60968 | - | 348 | WP_000142456.1 | hypothetical protein | - |
| DSZ51_RS26250 () | 61097..61432 | + | 336 | WP_001080730.1 | colicin 1A immunity protein | - |
| DSZ51_RS26255 () | 61463..61630 | - | 168 | Protein_70 | hypothetical protein | - |
| DSZ51_RS26260 () | 61739..62341 | + | 603 | WP_000517686.1 | hypothetical protein | - |
| DSZ51_RS26265 () | 62397..62891 | + | 495 | WP_021561690.1 | hypothetical protein | - |
| DSZ51_RS26270 () | 62891..63157 | + | 267 | WP_000627828.1 | hypothetical protein | - |
| DSZ51_RS26275 () | 63357..63564 | - | 208 | Protein_74 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DSZ51_RS26280 () | 63561..63830 | - | 270 | WP_000079940.1 | hypothetical protein | - |
| DSZ51_RS26765 () | 63885..64043 | - | 159 | WP_000841008.1 | hypothetical protein | - |
| DSZ51_RS26295 () | 64739..65770 | - | 1032 | WP_000907875.1 | replication initiation protein | - |
| DSZ51_RS26310 () | 66743..67006 | + | 264 | WP_001324596.1 | ash family protein | - |
| DSZ51_RS26315 () | 66924..67211 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| DSZ51_RS26325 () | 67653..68186 | + | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| DSZ51_RS26335 () | 68440..69123 | + | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| DSZ51_RS26340 () | 69137..69703 | + | 567 | WP_000776428.1 | hypothetical protein | - |
| DSZ51_RS26345 () | 69971..70225 | + | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| DSZ51_RS26350 () | 70268..70720 | + | 453 | WP_000008892.1 | hypothetical protein | - |
| DSZ51_RS26360 () | 71394..72461 | + | 1068 | WP_000742600.1 | hypothetical protein | VF |
| DSZ51_RS26365 () | 72461..72898 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
| DSZ51_RS26370 () | 72912..74594 | + | 1683 | WP_000748143.1 | hypothetical protein | VF |
| DSZ51_RS26375 () | 74587..75882 | + | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| DSZ51_RS26380 () | 75869..76321 | + | 453 | WP_001247336.1 | hypothetical protein | VF |
| DSZ51_RS26385 () | 76332..77885 | + | 1554 | WP_000362202.1 | hypothetical protein | VF |
| DSZ51_RS26390 () | 77898..78995 | + | 1098 | WP_001208805.1 | hypothetical protein | VF |
| DSZ51_RS26395 () | 79013..79627 | + | 615 | WP_000959785.1 | hypothetical protein | VF |
| DSZ51_RS26400 () | 79637..80197 | + | 561 | WP_000014116.1 | hypothetical protein | VF |
| DSZ51_RS26405 () | 80182..80838 | + | 657 | WP_001193553.1 | hypothetical protein | VF |
| DSZ51_RS26410 () | 80838..82130 | + | 1293 | WP_001417545.1 | hypothetical protein | VF |
| DSZ51_RS26415 () | 82127..82375 | - | 249 | WP_001349157.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|