MGE detailed information
MGE type: Prophage MGE length: 70218 bp
Accession: NZ_LT838200 Location: 2268150..2338367 Organism: Escherichia coli isolate WI2 isolate Replicon: chromosome
Accession: NZ_LT838200 Location: 2268150..2338367 Organism: Escherichia coli isolate WI2 isolate Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DSZ51_RS11615 () | 2264049..2265269 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| DSZ51_RS11620 () | 2265394..2266089 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| DSZ51_RS11625 () | 2266042..2267334 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| DSZ51_RS11630 () | 2267493..2268107 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| DSZ51_RS11635 () | 2268150..2269004 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit | - |
| DSZ51_RS11640 () | 2269006..2269623 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| DSZ51_RS11645 () | 2269634..2272057 | - | 2424 | WP_001340362.1 | dimethyl sulfoxide reductase subunit A | - |
| DSZ51_RS11650 () | 2272118..2274544 | - | 2427 | WP_000041675.1 | dimethyl sulfoxide reductase subunit A | - |
| DSZ51_RS11655 () | 2274743..2275048 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| DSZ51_RS11660 () | 2275156..2275866 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| DSZ51_RS11665 () | 2275869..2276429 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| DSZ51_RS11670 () | 2276464..2276805 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| DSZ51_RS11675 () | 2276940..2277266 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| DSZ51_RS11685 () | 2277472..2278686 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| DSZ51_RS11690 () | 2278698..2279717 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| DSZ51_RS11700 () | 2279905..2281185 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| DSZ51_RS11705 () | 2281220..2281471 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| DSZ51_RS11710 () | 2281544..2284015 | - | 2472 | WP_000048342.1 | exonuclease | - |
| DSZ51_RS11715 () | 2284108..2284299 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| DSZ51_RS11720 () | 2284296..2284484 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| DSZ51_RS11730 () | 2285052..2285270 | - | 219 | WP_001171942.1 | hypothetical protein | - |
| DSZ51_RS11740 () | 2285430..2285585 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| DSZ51_RS11745 () | 2285752..2286159 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| DSZ51_RS11750 () | 2286243..2286473 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| DSZ51_RS11755 () | 2286457..2286978 | + | 522 | WP_000705358.1 | hypothetical protein | - |
| DSZ51_RS11760 () | 2286959..2287924 | + | 966 | WP_000054512.1 | hypothetical protein | - |
| DSZ51_RS11765 () | 2287965..2288387 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| DSZ51_RS11770 () | 2288384..2288740 | + | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| DSZ51_RS11775 () | 2289260..2290795 | - | 1536 | WP_001333339.1 | IS66 family transposase ISEc22 | Transposase |
| DSZ51_RS11780 () | 2290844..2291191 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| DSZ51_RS11785 () | 2291188..2291592 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| DSZ51_RS26890 () | 2291814..2292101 | + | 288 | Protein_2171 | hypothetical protein | - |
| DSZ51_RS11800 () | 2292870..2294183 | + | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| DSZ51_RS11810 () | 2294620..2294952 | - | 333 | WP_001301033.1 | protein FlxA | - |
| DSZ51_RS11815 () | 2295155..2295460 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| DSZ51_RS11820 () | 2295485..2295724 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| DSZ51_RS11825 () | 2295724..2296011 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| DSZ51_RS11830 () | 2296083..2296238 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| DSZ51_RS11835 () | 2296455..2296706 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| DSZ51_RS11840 () | 2296773..2297051 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| DSZ51_RS11845 () | 2297053..2298102 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| DSZ51_RS11850 () | 2298116..2298868 | + | 753 | WP_001047135.1 | antitermination protein | - |
| DSZ51_RS26535 () | 2299146..2299235 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| DSZ51_RS11855 () | 2299290..2299502 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| DSZ51_RS11860 () | 2299803..2300018 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| DSZ51_RS27015 () | 2300382..2300552 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| DSZ51_RS11865 () | 2300772..2300987 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| DSZ51_RS11870 () | 2300992..2301303 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| DSZ51_RS11875 () | 2301300..2301833 | + | 534 | WP_001092971.1 | lysozyme | - |
| DSZ51_RS11880 () | 2301830..2302327 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| DSZ51_RS11885 () | 2302690..2302902 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| DSZ51_RS11890 () | 2302913..2303101 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| DSZ51_RS26540 () | 2303104..2303169 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| DSZ51_RS26545 () | 2303249..2303404 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| DSZ51_RS11900 () | 2303576..2303749 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| DSZ51_RS11905 () | 2303901..2304311 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| DSZ51_RS11910 () | 2304369..2304602 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| DSZ51_RS11920 () | 2304991..2305536 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| DSZ51_RS11925 () | 2305511..2307436 | + | 1926 | WP_001027259.1 | phage terminase large subunit family protein | - |
| DSZ51_RS11930 () | 2307433..2307639 | + | 207 | WP_000198149.1 | gpW family protein | - |
| DSZ51_RS11935 () | 2307636..2309237 | + | 1602 | WP_001349919.1 | phage portal protein | - |
| DSZ51_RS11940 () | 2309218..2310537 | + | 1320 | WP_000123218.1 | S49 family peptidase | - |
| DSZ51_RS11945 () | 2310547..2310879 | + | 333 | WP_001295978.1 | head decoration protein | - |
| DSZ51_RS11950 () | 2310935..2311960 | + | 1026 | WP_000063277.1 | major capsid protein | - |
| DSZ51_RS11955 () | 2312002..2312400 | + | 399 | WP_000158905.1 | DNA-packaging protein FI | - |
| DSZ51_RS11960 () | 2312412..2312765 | + | 354 | WP_000753007.1 | head-tail joining protein | - |
| DSZ51_RS11965 () | 2312777..2313355 | + | 579 | WP_000975070.1 | phage tail protein | - |
| DSZ51_RS11970 () | 2313352..2313747 | + | 396 | WP_021514552.1 | phage minor tail U family protein | - |
| DSZ51_RS11975 () | 2313755..2314495 | + | 741 | WP_001378665.1 | phage tail protein | - |
| DSZ51_RS11980 () | 2314511..2314933 | + | 423 | WP_001357868.1 | phage minor tail protein G | - |
| DSZ51_RS11985 () | 2314915..2315349 | + | 435 | WP_000459464.1 | phage tail assembly protein T | - |
| DSZ51_RS11990 () | 2315342..2317903 | + | 2562 | WP_085543254.1 | phage tail tape measure protein | - |
| DSZ51_RS11995 () | 2317900..2318229 | + | 330 | WP_000847331.1 | phage tail protein | - |
| DSZ51_RS12000 () | 2318229..2318927 | + | 699 | WP_001152612.1 | phage minor tail protein L | - |
| DSZ51_RS12005 () | 2318933..2319676 | + | 744 | WP_021514554.1 | C40 family peptidase | - |
| DSZ51_RS12010 () | 2319574..2320221 | + | 648 | WP_023277304.1 | tail assembly protein | - |
| DSZ51_RS12015 () | 2320282..2323779 | + | 3498 | WP_085543255.1 | host specificity protein J | - |
| DSZ51_RS12020 () | 2323849..2324448 | + | 600 | WP_001230340.1 | Outer membrane protein X | VF |
| DSZ51_RS12025 () | 2324513..2327587 | + | 3075 | WP_085543282.1 | phage tail protein | - |
| DSZ51_RS12030 () | 2327587..2328162 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| DSZ51_RS12035 () | 2328260..2328850 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| DSZ51_RS12040 () | 2329167..2329400 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| DSZ51_RS26550 () | 2329469..2329582 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| DSZ51_RS12045 () | 2330103..2331470 | + | 1368 | Protein_2223 | MHS family MFS transporter | - |
| DSZ51_RS12050 () | 2331559..2333019 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| DSZ51_RS12055 () | 2333054..2333257 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| DSZ51_RS12060 () | 2333434..2334120 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| DSZ51_RS12065 () | 2334209..2334955 | - | 747 | WP_000636571.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| DSZ51_RS12070 () | 2335092..2337137 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| DSZ51_RS12075 () | 2337181..2337699 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| DSZ51_RS12080 () | 2337975..2338367 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| DSZ51_RS12085 () | 2338622..2339512 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| DSZ51_RS27020 () | 2339627..2339731 | - | 105 | WP_211180496.1 | protein MgtT | - |
| DSZ51_RS12090 () | 2339731..2339826 | - | 96 | WP_000901367.1 | protein MgtS | - |
| DSZ51_RS12095 () | 2339953..2341140 | - | 1188 | WP_001054183.1 | efflux MFS transporter YdeE | - |
| DSZ51_RS12100 () | 2341335..2342233 | + | 899 | Protein_2235 | O-acetylserine/cysteine exporter | - |
| DSZ51_RS12105 () | 2342264..2342482 | - | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| DSZ51_RS12110 () | 2342514..2342897 | - | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| DSZ51_RS12115 () | 2342917..2343351 | - | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|