MGE detailed information
MGE type: Prophage MGE length: 81783 bp
Accession: NZ_LT838196 Location: 2263013..2344795 Organism: Escherichia coli isolate WI1 isolate Replicon: chromosome
Accession: NZ_LT838196 Location: 2263013..2344795 Organism: Escherichia coli isolate WI1 isolate Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WI2_RS26985 () | 2258896..2258997 | + | 102 | WP_211180498.1 | protein YdgV | - |
| WI2_RS11535 () | 2259104..2259469 | + | 366 | WP_000276149.1 | multidrug/spermidine efflux SMR transporter subunit MdtJ | - |
| WI2_RS11540 () | 2259456..2259785 | + | 330 | WP_000046661.1 | multidrug/spermidine efflux SMR transporter subunit MdtI | - |
| WI2_RS11545 () | 2259824..2260645 | - | 822 | WP_001260865.1 | serine protease | - |
| WI2_RS11550 () | 2260745..2260828 | - | 84 | WP_000233090.1 | hypothetical protein | - |
| WI2_RS11555 () | 2260921..2261229 | - | 309 | WP_001340364.1 | acid resistance repetitive basic protein Asr | - |
| WI2_RS26990 () | 2261485..2261604 | + | 120 | WP_001299090.1 | hypothetical protein | - |
| WI2_RS11565 () | 2261653..2262906 | - | 1254 | WP_000091840.1 | MFS transporter | - |
| WI2_RS11570 () | 2263013..2263906 | + | 894 | WP_001019525.1 | hypothetical protein | VF |
| WI2_RS11575 () | 2264041..2265261 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| WI2_RS11580 () | 2265386..2266081 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| WI2_RS11585 () | 2266034..2267326 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| WI2_RS11590 () | 2267485..2268099 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| WI2_RS11595 () | 2268142..2268996 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit | - |
| WI2_RS11600 () | 2268998..2269615 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| WI2_RS11605 () | 2269626..2272049 | - | 2424 | WP_001340362.1 | dimethyl sulfoxide reductase subunit A | - |
| WI2_RS11610 () | 2272110..2274536 | - | 2427 | WP_000041675.1 | dimethyl sulfoxide reductase subunit A | - |
| WI2_RS11615 () | 2274735..2275040 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| WI2_RS11620 () | 2275148..2275858 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| WI2_RS11625 () | 2275861..2276421 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| WI2_RS11630 () | 2276456..2276797 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| WI2_RS11635 () | 2276932..2277258 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| WI2_RS11645 () | 2277464..2278678 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| WI2_RS11650 () | 2278690..2279709 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| WI2_RS11655 () | 2279767..2279877 | + | 111 | WP_001360138.1 | hypothetical protein | - |
| WI2_RS11660 () | 2279897..2281177 | - | 1281 | WP_000876958.1 | hypothetical protein ; Integrase | Integrase |
| WI2_RS11665 () | 2281212..2281463 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| WI2_RS11670 () | 2281536..2284007 | - | 2472 | WP_000048342.1 | exonuclease | - |
| WI2_RS11675 () | 2284100..2284291 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| WI2_RS11680 () | 2284288..2284476 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| WI2_RS11690 () | 2285044..2285262 | - | 219 | WP_001171942.1 | hypothetical protein | - |
| WI2_RS11700 () | 2285422..2285577 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| WI2_RS11705 () | 2285744..2286151 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| WI2_RS11710 () | 2286235..2286465 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| WI2_RS11715 () | 2286449..2286970 | + | 522 | WP_000705358.1 | hypothetical protein | - |
| WI2_RS11720 () | 2286951..2287916 | + | 966 | WP_000054512.1 | hypothetical protein | - |
| WI2_RS11725 () | 2287957..2288379 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| WI2_RS11730 () | 2288376..2288732 | + | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| WI2_RS11735 () | 2289252..2290787 | - | 1536 | WP_001333339.1 | IS66 family transposase ISEc22 | Transposase |
| WI2_RS11740 () | 2290836..2291183 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| WI2_RS11745 () | 2291180..2291584 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| WI2_RS26855 () | 2291806..2292093 | + | 288 | Protein_2171 | hypothetical protein | - |
| WI2_RS11765 () | 2292862..2294175 | + | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| WI2_RS11770 () | 2294612..2294944 | - | 333 | WP_001301033.1 | protein FlxA | - |
| WI2_RS11775 () | 2295147..2295452 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| WI2_RS11780 () | 2295477..2295716 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| WI2_RS11785 () | 2295716..2296003 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| WI2_RS11790 () | 2296075..2296230 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| WI2_RS11795 () | 2296447..2296698 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| WI2_RS11800 () | 2296765..2297043 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| WI2_RS11805 () | 2297045..2298094 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| WI2_RS11810 () | 2298108..2298860 | + | 753 | WP_001047135.1 | antitermination protein | - |
| WI2_RS26265 () | 2299138..2299227 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| WI2_RS11815 () | 2299282..2299494 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| WI2_RS11820 () | 2299795..2300010 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| WI2_RS26995 () | 2300374..2300544 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| WI2_RS11825 () | 2300764..2300979 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| WI2_RS11830 () | 2300984..2301295 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| WI2_RS11835 () | 2301292..2301825 | + | 534 | WP_001092971.1 | lysozyme | - |
| WI2_RS11840 () | 2301822..2302319 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| WI2_RS11845 () | 2302682..2302894 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| WI2_RS11850 () | 2302905..2303093 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| WI2_RS26270 () | 2303096..2303161 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| WI2_RS11855 () | 2303241..2303396 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| WI2_RS11860 () | 2303568..2303741 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| WI2_RS11865 () | 2303893..2304303 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| WI2_RS11870 () | 2304361..2304594 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| WI2_RS11880 () | 2304983..2305528 | + | 546 | WP_085543251.1 | DNA-packaging protein | - |
| WI2_RS11885 () | 2305503..2306791 | + | 1289 | Protein_2198 | phage terminase large subunit family protein | - |
| WI2_RS11890 () | 2306788..2306994 | + | 207 | WP_021514547.1 | gpW family protein | - |
| WI2_RS11900 () | 2306991..2308175 | + | 1185 | Protein_2200 | phage portal protein | - |
| WI2_RS11905 () | 2308156..2309043 | + | 888 | WP_085543252.1 | hypothetical protein | - |
| WI2_RS11910 () | 2309053..2309385 | + | 333 | WP_001299443.1 | head decoration protein | - |
| WI2_RS26860 () | 2309441..2309903 | + | 463 | Protein_2203 | major capsid protein | - |
| WI2_RS26865 () | 2309907..2310058 | + | 152 | Protein_2204 | DNA-packaging protein FI | - |
| WI2_RS11925 () | 2310070..2310282 | + | 213 | Protein_2205 | phage tail protein | - |
| WI2_RS11930 () | 2310284..2310483 | + | 200 | Protein_2206 | phage tail protein | - |
| WI2_RS11935 () | 2310480..2310875 | + | 396 | WP_021514552.1 | phage minor tail U family protein | - |
| WI2_RS11940 () | 2310883..2311623 | + | 741 | WP_001378665.1 | phage tail protein | - |
| WI2_RS11945 () | 2311639..2312061 | + | 423 | WP_001357868.1 | phage minor tail protein G | - |
| WI2_RS11950 () | 2312043..2312477 | + | 435 | WP_000459464.1 | phage tail assembly protein T | - |
| WI2_RS11955 () | 2312470..2315031 | + | 2562 | WP_085543254.1 | phage tail tape measure protein | - |
| WI2_RS11960 () | 2315028..2315357 | + | 330 | WP_000847331.1 | phage tail protein | - |
| WI2_RS11965 () | 2315357..2316055 | + | 699 | WP_001152612.1 | phage minor tail protein L | - |
| WI2_RS11970 () | 2316061..2316804 | + | 744 | WP_021514554.1 | C40 family peptidase | - |
| WI2_RS11975 () | 2316702..2317349 | + | 648 | WP_023277304.1 | tail assembly protein | - |
| WI2_RS11980 () | 2317410..2320907 | + | 3498 | WP_085543255.1 | host specificity protein J | - |
| WI2_RS11985 () | 2320977..2321576 | + | 600 | WP_001230340.1 | hypothetical protein | VF |
| WI2_RS11990 () | 2321641..2324715 | + | 3075 | WP_085543282.1 | phage tail protein | - |
| WI2_RS11995 () | 2324715..2325290 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| WI2_RS12000 () | 2325388..2325978 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| WI2_RS12005 () | 2326295..2326528 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| WI2_RS26275 () | 2326597..2326710 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| WI2_RS12010 () | 2327231..2328598 | + | 1368 | Protein_2223 | MHS family MFS transporter | - |
| WI2_RS12015 () | 2328687..2330147 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| WI2_RS12020 () | 2330182..2330385 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| WI2_RS12025 () | 2330562..2331248 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| WI2_RS12030 () | 2331337..2332083 | - | 747 | WP_000636571.1 | hypothetical protein | VF |
| WI2_RS12040 () | 2332220..2334265 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| WI2_RS12045 () | 2334309..2334827 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| WI2_RS12050 () | 2335103..2335495 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| WI2_RS12055 () | 2335750..2336640 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| WI2_RS27000 () | 2336755..2336859 | - | 105 | WP_211180496.1 | protein MgtT | - |
| WI2_RS12060 () | 2336859..2336954 | - | 96 | WP_000901367.1 | protein MgtS | - |
| WI2_RS12065 () | 2337081..2338268 | - | 1188 | WP_001054183.1 | efflux MFS transporter YdeE | - |
| WI2_RS12070 () | 2338463..2339361 | + | 899 | Protein_2235 | O-acetylserine/cysteine exporter | - |
| WI2_RS12075 () | 2339392..2339610 | - | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| WI2_RS12080 () | 2339642..2340025 | - | 384 | WP_000091199.1 | hypothetical protein | VF |
| WI2_RS12085 () | 2340045..2340479 | - | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| WI2_RS12090 () | 2340691..2341356 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| WI2_RS12095 () | 2341381..2342571 | - | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| WI2_RS12100 () | 2342721..2343836 | - | 1116 | WP_000258591.1 | putative protein YneK | - |
| WI2_RS12105 () | 2343914..2344795 | - | 882 | WP_000366501.1 | hypothetical protein | VF |
| WI2_RS12110 () | 2344896..2346284 | + | 1389 | WP_000156615.1 | succinate-semialdehyde dehydrogenase | - |
| WI2_RS12115 () | 2346348..2347274 | + | 927 | WP_000257409.1 | glutaminase B | - |
| WI2_RS12120 () | 2347274..2347633 | + | 360 | WP_001191027.1 | DUF4186 domain-containing protein | - |
| WI2_RS12125 () | 2347706..2348692 | + | 987 | Protein_2246 | GGDEF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|