MGE detailed information
MGE type: Genomic_island MGE length: 54981 bp
Accession: NZ_LT838196 Location: 1845340..1900320 Organism: Escherichia coli isolate WI1 isolate Replicon: chromosome
Accession: NZ_LT838196 Location: 1845340..1900320 Organism: Escherichia coli isolate WI1 isolate Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WI2_RS09240 () | 1840958..1841431 | + | 474 | WP_001105385.1 | DNA gyrase inhibitor SbmC | - |
| WI2_RS09245 () | 1841630..1842688 | + | 1059 | WP_001200892.1 | FUSC family protein | - |
| WI2_RS09250 () | 1842860..1843189 | + | 330 | WP_000450409.1 | DUF496 family protein | - |
| WI2_RS09255 () | 1843290..1843472 | - | 183 | WP_024167529.1 | ethanolamine utilization protein | - |
| WI2_RS26850 () | 1843926..1844315 | - | 390 | WP_001445118.1 | IS110 family transposase | - |
| WI2_RS26225 () | 1845113..1845226 | - | 114 | WP_001161660.1 | DUF957 domain-containing protein | - |
| WI2_RS09265 () | 1845239..1845441 | - | 203 | Protein_1720 | hypothetical protein | - |
| WI2_RS09270 () | 1845543..1845947 | + | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| WI2_RS09275 () | 1845944..1846291 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| WI2_RS09280 () | 1846340..1847875 | + | 1536 | WP_001333339.1 | IS66 family transposase ISEc22 | Transposase |
| WI2_RS09285 () | 1847913..1848278 | - | 366 | WP_085543245.1 | TA system toxin CbtA family protein | Toxin Detail |
| WI2_RS09290 () | 1848368..1848736 | - | 369 | WP_001295723.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| WI2_RS09300 () | 1848899..1849120 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| WI2_RS09305 () | 1849183..1849659 | - | 477 | WP_001186774.1 | RadC family protein | - |
| WI2_RS09310 () | 1849675..1850148 | - | 474 | WP_000855059.1 | antirestriction protein | - |
| WI2_RS09320 () | 1850490..1851308 | - | 819 | WP_001234729.1 | DUF945 domain-containing protein | - |
| WI2_RS09330 () | 1851463..1851621 | - | 159 | WP_001323397.1 | DUF905 family protein | - |
| WI2_RS09335 () | 1851692..1854538 | - | 2847 | WP_000820596.1 | Ag43/Cah family autotransporter adhesin | - |
| WI2_RS09340 () | 1854910..1855782 | - | 873 | WP_001352361.1 | GTPase family protein | - |
| WI2_RS09345 () | 1855867..1856784 | - | 918 | WP_000250235.1 | hypothetical protein | - |
| WI2_RS09365 () | 1857984..1858586 | - | 603 | WP_000813456.1 | hypothetical protein | - |
| WI2_RS09370 () | 1858681..1858887 | - | 207 | WP_000235225.1 | AlpA family transcriptional regulator | - |
| WI2_RS09375 () | 1859028..1859294 | + | 267 | WP_000840364.1 | hypothetical protein | - |
| WI2_RS09385 () | 1859646..1859771 | + | 126 | Protein_1737 | hemolysin activation protein | - |
| WI2_RS09395 () | 1860516..1861085 | + | 570 | WP_000221554.1 | inovirus Gp2 family protein | - |
| WI2_RS09400 () | 1861251..1861643 | + | 393 | WP_001352248.1 | hypothetical protein | - |
| WI2_RS09405 () | 1861653..1862621 | - | 969 | Protein_1740 | IS110 family transposase | - |
| WI2_RS09410 () | 1862806..1863210 | + | 405 | WP_001221631.1 | zinc-ribbon domain-containing protein | - |
| WI2_RS09415 () | 1863501..1864163 | + | 663 | Protein_1742 | ISL3 family transposase | - |
| WI2_RS09420 () | 1864227..1864487 | + | 261 | Protein_1743 | IS3 family transposase ISSfl10 | Transposase |
| WI2_RS09425 () | 1864497..1865648 | - | 1152 | WP_024176387.1 | IS30 family transposase IS30D | Transposase |
| WI2_RS09430 () | 1865713..1865961 | - | 249 | Protein_1745 | IS3 family transposase ISEhe3 | Transposase |
| WI2_RS09440 () | 1867014..1867559 | + | 546 | WP_000973197.1 | bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | - |
| WI2_RS09445 () | 1867556..1868299 | + | 744 | WP_001352249.1 | adenosylcobinamide-GDP ribazoletransferase | - |
| WI2_RS09450 () | 1868311..1869390 | + | 1080 | WP_001166154.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | - |
| WI2_RS09455 () | 1869452..1870387 | + | 936 | WP_000986349.1 | L,D-transpeptidase | - |
| WI2_RS09465 () | 1870845..1871762 | + | 918 | WP_001011462.1 | nitrogen assimilation transcriptional regulator NAC | - |
| WI2_RS09470 () | 1871864..1872814 | + | 951 | WP_001011023.1 | HTH-type transcriptional regulator Cbl | - |
| WI2_RS09480 () | 1872932..1874575 | + | 1644 | Protein_1752 | toxic metabolite efflux MATE transporter YeeO | - |
| WI2_RS09495 () | 1875079..1875776 | + | 698 | Protein_1753 | IS1 family transposase IS1R | Transposase |
| WI2_RS09500 () | 1875982..1876698 | - | 717 | WP_000532923.1 | hypothetical protein | VF |
| WI2_RS09505 () | 1877041..1878495 | - | 1455 | WP_001060229.1 | AMP nucleosidase | - |
| WI2_RS09510 () | 1878597..1879913 | - | 1317 | WP_000378546.1 | shikimate transporter | - |
| WI2_RS09515 () | 1880228..1881280 | + | 1053 | Protein_1757 | glycosyltransferase family 9 protein | - |
| WI2_RS09520 () | 1881542..1888618 | - | 7077 | WP_023150057.1 | inverse autotransporter adhesin YeeJ | - |
| WI2_RS09530 () | 1889108..1889905 | - | 798 | WP_001333886.1 | DgsA anti-repressor MtfA | - |
| WI2_RS09545 () | 1890658..1891188 | - | 531 | Protein_1760 | cytochrome b | - |
| WI2_RS09550 () | 1891532..1892182 | - | 651 | WP_001007770.1 | metal-binding protein ZinT | - |
| WI2_RS09555 () | 1892439..1893074 | - | 636 | WP_001240105.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| WI2_RS09560 () | 1893075..1894079 | - | 1005 | WP_000740094.1 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
| WI2_RS09565 () | 1894188..1894601 | - | 414 | WP_000920127.1 | hydroxyisourate hydrolase | - |
| WI2_RS09570 () | 1894734..1895405 | + | 672 | WP_001339045.1 | hypothetical protein | VF |
| WI2_RS09575 () | 1895405..1896763 | + | 1359 | WP_000826766.1 | two-component system sensor histidine kinase HprS | - |
| WI2_RS09580 () | 1896871..1897722 | - | 852 | WP_000218214.1 | protein deglycase HchA | - |
| WI2_RS26240 () | 1897978..1898175 | + | 198 | WP_176721431.1 | hypothetical protein | - |
| WI2_RS09590 () | 1898315..1899388 | - | 1074 | WP_000824364.1 | porin | - |
| WI2_RS09595 () | 1899955..1900320 | + | 366 | WP_072143825.1 | permease | - |
| WI2_RS09600 () | 1900360..1901055 | + | 696 | WP_000365580.1 | phosphohydrolase | - |
| WI2_RS09605 () | 1901122..1902540 | + | 1419 | WP_001157230.1 | DNA-cytosine methyltransferase | - |
| WI2_RS09610 () | 1902521..1902991 | + | 471 | WP_000786004.1 | VSPR family DNA mismatch endonuclease | - |
| WI2_RS09615 () | 1902980..1903900 | - | 921 | WP_001212229.1 | drug/metabolite exporter YedA | - |
| WI2_RS09620 () | 1904073..1904990 | + | 918 | WP_000922683.1 | DUF808 domain-containing protein | - |
| WI2_RS09625 () | 1905069..1905251 | + | 183 | WP_000009307.1 | DUF2158 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|