MGE detailed information
MGE type: Prophage MGE length: 75989 bp
Accession: NZ_LT827011 Location: 1101582..1177570 Organism: Escherichia coli O127:H6 isolate EPEC E2348/69 variety Replicon: chromosome
Accession: NZ_LT827011 Location: 1101582..1177570 Organism: Escherichia coli O127:H6 isolate EPEC E2348/69 variety Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BQ9544_RS05780 () | 1097271..1098512 | + | 1242 | WP_001044299.1 | bifunctional glucose-1-phosphatase/inositol phosphatase | - |
| BQ9544_RS05785 () | 1098701..1100074 | + | 1374 | WP_000244367.1 | IS4-like element ISEc13 family transposase | - |
| BQ9544_RS05790 () | 1100109..1100336 | - | 228 | WP_001143120.1 | YccJ family protein | - |
| BQ9544_RS05795 () | 1100357..1100953 | - | 597 | WP_001151437.1 | NAD(P)H:quinone oxidoreductase | - |
| BQ9544_RS05805 () | 1101326..1101499 | + | 174 | WP_001273658.1 | general stress protein | - |
| BQ9544_RS05810 () | 1101582..1102910 | - | 1329 | WP_001298362.1 | pyrimidine utilization transport protein G | - |
| BQ9544_RS05815 () | 1102931..1103425 | - | 495 | WP_001028090.1 | pyrimidine utilization flavin reductase protein F | - |
| BQ9544_RS05820 () | 1103436..1104026 | - | 591 | WP_001001173.1 | malonic semialdehyde reductase | - |
| BQ9544_RS05825 () | 1104036..1104836 | - | 801 | WP_001340068.1 | pyrimidine utilization protein D | - |
| BQ9544_RS05830 () | 1104844..1105230 | - | 387 | WP_001126780.1 | pyrimidine utilization protein C | - |
| BQ9544_RS05835 () | 1105242..1105934 | - | 693 | WP_001340067.1 | peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB | - |
| BQ9544_RS05840 () | 1105934..1107025 | - | 1092 | WP_001340066.1 | pyrimidine utilization protein A | - |
| BQ9544_RS05845 () | 1107313..1107951 | + | 639 | WP_000191701.1 | HTH-type transcriptional regulator RutR | - |
| BQ9544_RS05850 () | 1107991..1111953 | - | 3963 | WP_012578870.1 | trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase | - |
| BQ9544_RS05855 () | 1112008..1112217 | + | 210 | WP_000979523.1 | hypothetical protein | - |
| BQ9544_RS05865 () | 1112376..1113884 | + | 1509 | WP_001018494.1 | sodium/proline symporter PutP | - |
| BQ9544_RS05870 () | 1114104..1114934 | + | 831 | WP_000497957.1 | FTR1 family protein | - |
| BQ9544_RS05875 () | 1114992..1116119 | + | 1128 | WP_000154378.1 | iron uptake system protein EfeO | - |
| BQ9544_RS05880 () | 1116125..1117396 | + | 1272 | WP_001199145.1 | deferrochelatase/peroxidase EfeB | - |
| BQ9544_RS05890 () | 1118023..1118811 | + | 789 | WP_000533536.1 | phosphate starvation-inducible protein PhoH | - |
| BQ9544_RS05895 () | 1119374..1120060 | + | 687 | WP_000009232.1 | DUF2726 domain-containing protein | - |
| BQ9544_RS05900 () | 1120326..1121543 | + | 1218 | WP_000279877.1 | hypothetical protein ; Integrase | Integrase |
| BQ9544_RS05905 () | 1121713..1123242 | - | 1530 | WP_012578871.1 | DUF3987 domain-containing protein | - |
| BQ9544_RS05910 () | 1123214..1123501 | - | 288 | WP_000070929.1 | AlpA family transcriptional regulator | - |
| BQ9544_RS05915 () | 1123602..1125437 | + | 1836 | WP_001258871.1 | hypothetical protein | - |
| BQ9544_RS05920 () | 1126812..1127375 | + | 564 | WP_000282108.1 | inovirus-type Gp2 protein | - |
| BQ9544_RS05925 () | 1127515..1127844 | + | 330 | Protein_1093 | DEAD/DEAH box helicase | - |
| BQ9544_RS05930 () | 1127898..1128390 | - | 493 | Protein_1094 | IS3 family transposase ISSfl10 | Transposase |
| BQ9544_RS05935 () | 1128543..1128782 | + | 240 | WP_001260398.1 | hypothetical protein | - |
| BQ9544_RS25895 () | 1129032..1137996 | - | 8965 | Protein_1096 | hypothetical protein | VF |
| BQ9544_RS05955 () | 1138203..1138709 | - | 507 | WP_000609738.1 | hypothetical protein | VF |
| BQ9544_RS05960 () | 1138758..1139746 | - | 989 | Protein_1098 | hypothetical protein | VF |
| BQ9544_RS05970 () | 1139987..1140136 | - | 150 | Protein_1099 | IS1 family transposase | - |
| BQ9544_RS05975 () | 1140353..1141930 | - | 1578 | Protein_1100 | ShET2/EspL2 family type III secretion system effector toxin | - |
| BQ9544_RS05985 () | 1142234..1142455 | + | 222 | WP_000022709.1 | hypothetical protein | - |
| BQ9544_RS05990 () | 1142729..1143606 | - | 878 | Protein_1102 | IS4 family transposase | - |
| BQ9544_RS05995 () | 1143727..1143932 | + | 206 | Protein_1103 | methyltransferase | - |
| BQ9544_RS06000 () | 1144049..1144237 | - | 189 | Protein_1104 | IS66 family transposase IS682 | Transposase |
| BQ9544_RS06005 () | 1144298..1144837 | + | 540 | Protein_1105 | IS110 family transposase ISEc45 | Transposase |
| BQ9544_RS06010 () | 1144892..1146105 | + | 1214 | WP_170315999.1 | IS3 family transposase IS629 | Transposase |
| BQ9544_RS06015 () | 1146148..1146339 | - | 192 | Protein_1107 | IS66 family transposase ISEc23 | Transposase |
| BQ9544_RS06020 () | 1146410..1147421 | - | 1012 | Protein_1108 | transposase | - |
| BQ9544_RS06030 () | 1147639..1148661 | + | 1023 | WP_000255946.1 | IS21 family transposase IS100kyp | Transposase |
| BQ9544_RS06035 () | 1148658..1149440 | + | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| BQ9544_RS06040 () | 1149898..1150098 | - | 201 | Protein_1111 | integrase core domain-containing protein | - |
| BQ9544_RS06045 () | 1150268..1150984 | - | 717 | WP_001122107.1 | M48 family metallopeptidase | - |
| BQ9544_RS06050 () | 1150984..1154079 | - | 3096 | WP_000108733.1 | HsdR family type I site-specific deoxyribonuclease | - |
| BQ9544_RS06055 () | 1154098..1155165 | - | 1068 | WP_000634203.1 | macro domain-containing protein | Antitoxin Detail |
| BQ9544_RS06060 () | 1155162..1155818 | - | 657 | WP_000312835.1 | DUF4433 domain-containing protein | Toxin Detail |
| BQ9544_RS06065 () | 1155830..1157179 | - | 1350 | WP_001386438.1 | restriction endonuclease subunit S | - |
| BQ9544_RS06070 () | 1157191..1159629 | - | 2439 | WP_000985463.1 | type I restriction-modification system subunit M | - |
| BQ9544_RS06075 () | 1159669..1159908 | - | 240 | WP_000343040.1 | hypothetical protein | - |
| BQ9544_RS06085 () | 1161060..1161428 | + | 369 | WP_000013660.1 | hypothetical protein | - |
| BQ9544_RS06090 () | 1161609..1161884 | + | 276 | WP_000762451.1 | hypothetical protein | - |
| BQ9544_RS26055 () | 1164125..1164223 | + | 99 | Protein_1122 | IS66 family insertion sequence element accessory protein TnpB | - |
| BQ9544_RS06110 () | 1164254..1165867 | + | 1614 | WP_000080159.1 | IS66 family transposase ISEc47 | Transposase |
| BQ9544_RS06115 () | 1165997..1167003 | + | 1007 | Protein_1124 | IS30 family transposase IS30D | Transposase |
| BQ9544_RS25990 () | 1168317..1168460 | + | 144 | Protein_1126 | IS3 family transposase IS911 | Transposase |
| BQ9544_RS06125 () | 1168473..1168730 | - | 258 | Protein_1127 | IS3 family transposase IS911 | Transposase |
| BQ9544_RS06135 () | 1168973..1169844 | + | 872 | Protein_1128 | GTPase family protein | - |
| BQ9544_RS06140 () | 1170076..1171384 | + | 1309 | Protein_1129 | autotransporter adhesin family protein | - |
| BQ9544_RS06145 () | 1171483..1173867 | + | 2385 | WP_000544657.1 | dynamin family protein | - |
| BQ9544_RS06150 () | 1173864..1174769 | + | 906 | WP_000203541.1 | chemotaxis protein | - |
| BQ9544_RS06155 () | 1174766..1175836 | + | 1071 | WP_000102671.1 | patatin-like phospholipase family protein | - |
| BQ9544_RS06170 () | 1176176..1176994 | + | 819 | WP_001234664.1 | DUF945 domain-containing protein | - |
| BQ9544_RS06175 () | 1177085..1177570 | + | 486 | WP_000214398.1 | antirestriction protein | - |
| BQ9544_RS06180 () | 1177586..1178062 | + | 477 | WP_001186738.1 | RadC family protein | - |
| BQ9544_RS06185 () | 1178125..1178346 | + | 222 | WP_001220314.1 | DUF987 domain-containing protein | - |
| BQ9544_RS06190 () | 1178509..1178883 | + | 375 | WP_001280955.1 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| BQ9544_RS06195 () | 1178930..1179304 | + | 375 | WP_000854914.1 | TA system toxin CbtA family protein | - |
| BQ9544_RS06200 () | 1179301..1179792 | + | 492 | WP_000976857.1 | hypothetical protein | - |
| BQ9544_RS06205 () | 1179804..1180001 | + | 198 | WP_000839282.1 | DUF957 domain-containing protein | - |
| BQ9544_RS06210 () | 1180086..1180928 | + | 843 | WP_001280481.1 | DUF4942 domain-containing protein | - |
| BQ9544_RS06220 () | 1181398..1182336 | + | 939 | WP_000351277.1 | glyoxylate/hydroxypyruvate reductase GhrA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O127:H6 str. E2348/69 | Prophage | TA23247 | NC_011601 | 1117747..1177570 | 0.006 |