MGE detailed information
MGE type: Prophage MGE length: 57762 bp
Accession: NZ_LT671859 Location: 2005404..2063165 Organism: Staphylococcus aureus isolate Clinical isolate Replicon: chromosome
Accession: NZ_LT671859 Location: 2005404..2063165 Organism: Staphylococcus aureus isolate Clinical isolate Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EDCC5055_RS10290 () | 2001588..2001902 | - | 315 | Protein_1886 | MAP domain-containing protein | - |
| EDCC5055_RS10295 () | 2001889..2003643 | - | 1755 | WP_001549158.1 | extracellular adherence protein Eap/Map | - |
| EDCC5055_RS10300 () | 2004029..2004279 | + | 251 | Protein_1888 | sphingomyelin phosphodiesterase | - |
| EDCC5055_RS10305 () | 2004601..2004780 | + | 180 | WP_000669791.1 | hypothetical protein | - |
| EDCC5055_RS10315 () | 2005091..2005351 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| EDCC5055_RS10320 () | 2005404..2005754 | - | 351 | WP_000702263.1 | Staphylococcal complement inhibitor | VF |
| EDCC5055_RS10325 () | 2006265..2006600 | - | 336 | Protein_1892 | SH3 domain-containing protein | - |
| EDCC5055_RS10345 () | 2007251..2007742 | - | 492 | WP_000920038.1 | Staphylokinase | VF |
| EDCC5055_RS10350 () | 2007933..2008688 | - | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| EDCC5055_RS10355 () | 2008700..2008954 | - | 255 | WP_000611508.1 | phage holin | - |
| EDCC5055_RS10360 () | 2009006..2009113 | + | 108 | WP_031762631.1 | hypothetical protein | - |
| - () | 2009035..2009174 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2009035..2009174 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2009035..2009174 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2009035..2009174 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| EDCC5055_RS10365 () | 2009166..2009342 | - | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| EDCC5055_RS10370 () | 2009451..2010224 | - | 774 | WP_000750412.1 | Enterotoxin type A | VF |
| EDCC5055_RS10375 () | 2010597..2010971 | - | 375 | WP_000340977.1 | hypothetical protein | - |
| EDCC5055_RS10380 () | 2011027..2011314 | - | 288 | WP_001262621.1 | hypothetical protein | - |
| EDCC5055_RS10385 () | 2011360..2011512 | - | 153 | WP_001000058.1 | hypothetical protein | - |
| EDCC5055_RS10390 () | 2011505..2015287 | - | 3783 | WP_000582129.1 | hypothetical protein | - |
| EDCC5055_RS10395 () | 2015303..2016793 | - | 1491 | WP_001154317.1 | phage tail family protein | - |
| EDCC5055_RS10400 () | 2016793..2021442 | - | 4650 | WP_073546264.1 | phage tail tape measure protein | - |
| EDCC5055_RS10405 () | 2021498..2021620 | - | 123 | WP_000571956.1 | hypothetical protein | - |
| EDCC5055_RS10410 () | 2021680..2022126 | - | 447 | WP_000442605.1 | hypothetical protein | - |
| EDCC5055_RS10415 () | 2022193..2023146 | - | 954 | WP_000570648.1 | Ig-like domain-containing protein | - |
| EDCC5055_RS10420 () | 2023147..2023527 | - | 381 | Protein_1908 | hypothetical protein | - |
| EDCC5055_RS10425 () | 2023524..2023901 | - | 378 | WP_000501242.1 | HK97 gp10 family phage protein | - |
| EDCC5055_RS10430 () | 2023901..2024236 | - | 336 | WP_000975314.1 | head-tail adaptor protein | - |
| EDCC5055_RS10435 () | 2024223..2024555 | - | 333 | WP_001177483.1 | head-tail connector protein | - |
| EDCC5055_RS10440 () | 2024564..2024722 | - | 159 | WP_001252099.1 | hypothetical protein | - |
| EDCC5055_RS10445 () | 2024758..2026005 | - | 1248 | WP_000849950.1 | phage major capsid protein | - |
| EDCC5055_RS10450 () | 2026093..2026677 | - | 585 | WP_000032525.1 | HK97 family phage prohead protease | - |
| EDCC5055_RS10455 () | 2026670..2027920 | - | 1251 | WP_000511067.1 | phage portal protein | - |
| EDCC5055_RS10460 () | 2027926..2028126 | - | 201 | WP_000365299.1 | hypothetical protein | - |
| EDCC5055_RS10465 () | 2028140..2029834 | - | 1695 | WP_000133304.1 | phage terminase large subunit | - |
| EDCC5055_RS10470 () | 2029837..2030304 | - | 468 | WP_000919026.1 | phage terminase small subunit P27 family | - |
| EDCC5055_RS10475 () | 2030433..2030777 | - | 345 | WP_000817289.1 | HNH endonuclease | - |
| EDCC5055_RS10480 () | 2030793..2031245 | - | 453 | WP_000406191.1 | nucleoside triphosphate pyrophosphohydrolase family protein | - |
| EDCC5055_RS10485 () | 2031360..2031830 | - | 471 | WP_000282755.1 | hypothetical protein | - |
| EDCC5055_RS10495 () | 2031853..2032053 | - | 201 | WP_001570807.1 | DUF1514 family protein | - |
| EDCC5055_RS10500 () | 2032053..2032202 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| EDCC5055_RS10505 () | 2032202..2032588 | - | 387 | WP_001570808.1 | hypothetical protein | - |
| EDCC5055_RS10510 () | 2032578..2032796 | - | 219 | WP_000671662.1 | hypothetical protein | - |
| EDCC5055_RS10515 () | 2032807..2033010 | - | 204 | WP_000219344.1 | hypothetical protein | - |
| EDCC5055_RS10520 () | 2033007..2033213 | - | 207 | WP_000195768.1 | DUF1381 domain-containing protein | - |
| EDCC5055_RS10525 () | 2033250..2033786 | - | 537 | WP_000185669.1 | dUTP diphosphatase | - |
| EDCC5055_RS10530 () | 2033779..2034027 | - | 249 | WP_001065083.1 | DUF1024 family protein | - |
| EDCC5055_RS10535 () | 2034020..2034304 | - | 285 | WP_001105601.1 | hypothetical protein | - |
| EDCC5055_RS10540 () | 2034301..2034750 | - | 450 | WP_000982705.1 | hypothetical protein | - |
| EDCC5055_RS10545 () | 2034747..2034941 | - | 195 | WP_000983953.1 | hypothetical protein | - |
| EDCC5055_RS10550 () | 2034938..2035342 | - | 405 | WP_000695756.1 | hypothetical protein | - |
| EDCC5055_RS10555 () | 2035345..2035551 | - | 207 | WP_000693995.1 | hypothetical protein | - |
| EDCC5055_RS10560 () | 2035565..2035813 | - | 249 | WP_073546265.1 | hypothetical protein | - |
| EDCC5055_RS10565 () | 2035813..2036067 | - | 255 | WP_000022723.1 | DUF3310 domain-containing protein | - |
| EDCC5055_RS14875 () | 2036067..2036684 | - | 618 | WP_000907344.1 | hypothetical protein | - |
| EDCC5055_RS10575 () | 2036685..2036870 | - | 186 | WP_001187246.1 | DUF3113 family protein | - |
| EDCC5055_RS10580 () | 2036875..2037279 | - | 405 | WP_000049801.1 | DUF1064 domain-containing protein | - |
| EDCC5055_RS10585 () | 2037290..2037511 | - | 222 | WP_001123693.1 | DUF3269 family protein | - |
| EDCC5055_RS10590 () | 2037524..2037682 | - | 159 | WP_000628839.1 | hypothetical protein | - |
| EDCC5055_RS10595 () | 2037679..2038464 | - | 786 | WP_000443353.1 | ATP-binding protein | - |
| EDCC5055_RS10600 () | 2038477..2039208 | - | 732 | WP_000132048.1 | helix-turn-helix domain-containing protein | - |
| EDCC5055_RS10605 () | 2039273..2039554 | + | 282 | WP_000414755.1 | hypothetical protein | - |
| EDCC5055_RS15155 () | 2039547..2039696 | - | 150 | WP_001081076.1 | hypothetical protein | - |
| EDCC5055_RS10610 () | 2039693..2040364 | - | 672 | WP_001199434.1 | hypothetical protein | - |
| EDCC5055_RS10615 () | 2040377..2040931 | - | 555 | WP_000704713.1 | single-stranded DNA-binding protein | - |
| EDCC5055_RS10620 () | 2040961..2041740 | - | 780 | WP_000139741.1 | ATP-binding protein | - |
| EDCC5055_RS10625 () | 2041733..2041954 | - | 222 | WP_000815400.1 | DUF2483 family protein | - |
| EDCC5055_RS10630 () | 2041964..2042224 | - | 261 | WP_000291487.1 | hypothetical protein ; Integrase | Integrase |
| EDCC5055_RS10635 () | 2042317..2042478 | - | 162 | WP_000066020.1 | DUF1270 domain-containing protein | - |
| EDCC5055_RS10640 () | 2042475..2042795 | - | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| EDCC5055_RS10645 () | 2042854..2043486 | + | 633 | WP_000275058.1 | hypothetical protein | - |
| EDCC5055_RS10650 () | 2043501..2043641 | - | 141 | WP_000939496.1 | hypothetical protein | - |
| EDCC5055_RS10655 () | 2043672..2043869 | - | 198 | WP_001148861.1 | hypothetical protein | - |
| EDCC5055_RS10660 () | 2043885..2044634 | - | 750 | WP_001148337.1 | phage antirepressor KilAC domain-containing protein | - |
| EDCC5055_RS10665 () | 2044691..2045230 | + | 540 | WP_000351243.1 | hypothetical protein | - |
| EDCC5055_RS10670 () | 2045254..2045514 | - | 261 | WP_000435341.1 | transcriptional regulator | - |
| EDCC5055_RS10675 () | 2045532..2045756 | - | 225 | WP_000338186.1 | DUF739 family protein | - |
| EDCC5055_RS10680 () | 2045914..2046684 | + | 771 | WP_001208482.1 | helix-turn-helix domain-containing protein | - |
| EDCC5055_RS10685 () | 2046884..2047066 | + | 183 | WP_000705240.1 | hypothetical protein | - |
| EDCC5055_RS10690 () | 2047102..2047248 | + | 147 | WP_001013104.1 | hypothetical protein | - |
| EDCC5055_RS10695 () | 2047245..2047859 | - | 615 | WP_000191459.1 | hypothetical protein | - |
| EDCC5055_RS10700 () | 2047967..2049004 | + | 1038 | WP_000857193.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| EDCC5055_RS10705 () | 2049055..2049885 | + | 831 | Protein_1965 | Phospholipase C | VF |
| EDCC5055_RS10710 () | 2050123..2051139 | - | 1017 | WP_000595324.1 | putative leukocidin-like protein 1 | VF |
| EDCC5055_RS10715 () | 2051161..2052216 | - | 1056 | WP_000791407.1 | putative leukocidin-like protein 2 | VF |
| EDCC5055_RS10720 () | 2052651..2053874 | + | 1224 | WP_000206638.1 | ArgE/DapE family deacylase | - |
| EDCC5055_RS10730 () | 2054246..2055091 | - | 846 | WP_000812008.1 | class I SAM-dependent methyltransferase | - |
| EDCC5055_RS10735 () | 2055153..2056064 | - | 912 | WP_000825510.1 | Iron(3+)-hydroxamate-binding protein FhuD | VF |
| EDCC5055_RS10740 () | 2056225..2057532 | + | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| EDCC5055_RS10750 () | 2058385..2058828 | - | 444 | WP_000022887.1 | GNAT family N-acetyltransferase | - |
| EDCC5055_RS10755 () | 2058993..2059370 | - | 378 | WP_001797573.1 | hypothetical protein | - |
| EDCC5055_RS10760 () | 2059688..2060278 | - | 591 | WP_001293058.1 | terminase small subunit | - |
| EDCC5055_RS10765 () | 2060275..2060487 | - | 213 | WP_000128898.1 | hypothetical protein | - |
| EDCC5055_RS10770 () | 2060548..2061094 | + | 547 | Protein_1976 | site-specific integrase | - |
| EDCC5055_RS10775 () | 2061189..2062805 | - | 1617 | WP_000240645.1 | 60 kDa chaperonin | VF |
| EDCC5055_RS10780 () | 2062881..2063165 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| EDCC5055_RS10785 () | 2063340..2064083 | + | 744 | WP_015581889.1 | CPBP family intramembrane metalloprotease | - |
| EDCC5055_RS10790 () | 2064108..2065367 | - | 1260 | WP_015581890.1 | hypothetical protein | - |
| EDCC5055_RS10795 () | 2065564..2066190 | + | 627 | WP_000522384.1 | nitroreductase family protein | - |
| EDCC5055_RS10805 () | 2066551..2067336 | + | 786 | WP_000867960.1 | carbon-nitrogen family hydrolase | - |
| EDCC5055_RS10810 () | 2067933..2068067 | - | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|