MGE detailed information
MGE type: Genomic_island MGE length: 26141 bp
Accession: NZ_LT630450 Location: 977464..1003604 Organism: Desulfovibrio piger strain FI11049 isolate FI11049 Replicon: chromosome
Accession: NZ_LT630450 Location: 977464..1003604 Organism: Desulfovibrio piger strain FI11049 isolate FI11049 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DESPIGER_RS04625 () | 972539..973312 | + | 774 | WP_072333667.1 | ABC transporter permease | - |
| DESPIGER_RS04630 () | 973309..973965 | + | 657 | WP_072333670.1 | ABC transporter ATP-binding protein | - |
| DESPIGER_RS04635 () | 973968..975122 | + | 1155 | WP_156831634.1 | chain-length determining protein | - |
| DESPIGER_RS04640 () | 975135..976313 | + | 1179 | WP_072333672.1 | hypothetical protein | - |
| DESPIGER_RS04645 () | 976343..977461 | + | 1119 | WP_072333675.1 | UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) | - |
| DESPIGER_RS04650 () | 977464..978660 | + | 1197 | WP_072333678.1 | UDP-N-acetyl-D-mannosamine dehydrogenase | VF |
| DESPIGER_RS04655 () | 978706..980865 | + | 2160 | WP_083575303.1 | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | VF |
| DESPIGER_RS04660 () | 980942..982084 | + | 1143 | WP_072333685.1 | UDP-galactopyranose mutase | VF |
| DESPIGER_RS04665 () | 982106..983419 | + | 1314 | WP_072333689.1 | UDP-N-acetyl-D-glucosamine 6-dehydrogenase | VF |
| DESPIGER_RS04670 () | 983573..984097 | + | 525 | WP_156831635.1 | hypothetical protein | - |
| DESPIGER_RS12875 () | 984181..985173 | + | 993 | WP_156831636.1 | hypothetical protein | - |
| DESPIGER_RS04675 () | 985166..986230 | + | 1065 | WP_072333694.1 | glycosyl transferase | - |
| DESPIGER_RS04680 () | 986238..986783 | + | 546 | WP_072333698.1 | hypothetical protein | - |
| DESPIGER_RS04685 () | 986896..987855 | + | 960 | WP_072333701.1 | polysaccharide deacetylase | - |
| DESPIGER_RS04690 () | 987860..989140 | + | 1281 | WP_072333703.1 | glycosyltransferase family 4 protein | - |
| DESPIGER_RS04695 () | 989125..990213 | + | 1089 | WP_072333706.1 | glycosyltransferase | - |
| DESPIGER_RS12625 () | 990232..992427 | + | 2196 | WP_083575304.1 | hypothetical protein | VF |
| DESPIGER_RS04710 () | 992417..993964 | + | 1548 | WP_072333709.1 | hypothetical protein | VF |
| DESPIGER_RS12880 () | 994207..994614 | + | 408 | WP_156831637.1 | helix-turn-helix domain-containing protein | - |
| DESPIGER_RS04715 () | 994755..995255 | - | 501 | WP_072333712.1 | GNAT family N-acetyltransferase | Toxin Detail |
| DESPIGER_RS04720 () | 995257..995526 | - | 270 | WP_072333715.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| DESPIGER_RS04725 () | 995655..995924 | - | 270 | WP_072333718.1 | hypothetical protein | - |
| DESPIGER_RS04730 () | 995928..996128 | - | 201 | WP_072333720.1 | hypothetical protein | - |
| DESPIGER_RS13080 () | 996984..997247 | - | 264 | WP_162273851.1 | hypothetical protein | - |
| DESPIGER_RS04735 () | 997585..1000053 | + | 2469 | WP_072333723.1 | hypothetical protein | VF |
| DESPIGER_RS04740 () | 1000458..1002212 | + | 1755 | WP_072333726.1 | type I restriction-modification system subunit M | - |
| DESPIGER_RS04745 () | 1002342..1003604 | + | 1263 | WP_072333729.1 | restriction endonuclease subunit S | - |
| DESPIGER_RS04750 () | 1003589..1006639 | + | 3051 | WP_072333732.1 | type I restriction endonuclease subunit R | - |
| DESPIGER_RS04755 () | 1006796..1007713 | + | 918 | WP_083575426.1 | DUF1848 domain-containing protein | - |
| DESPIGER_RS04760 () | 1007888..1008535 | + | 648 | WP_072333735.1 | TetR/AcrR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|