MGE detailed information
MGE type: Prophage MGE length: 26182 bp
Accession: NZ_LT601384 Location: 5037807..5063988 Organism: Escherichia coli isolate NCTC86EC Replicon: chromosome
Accession: NZ_LT601384 Location: 5037807..5063988 Organism: Escherichia coli isolate NCTC86EC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NCTC86EC_RS24765 () | 5033050..5033316 | - | 267 | WP_000840364.1 | hypothetical protein | - |
| NCTC86EC_RS28170 () | 5033457..5033663 | + | 207 | WP_000235221.1 | AlpA family transcriptional regulator | - |
| NCTC86EC_RS24775 () | 5033758..5034360 | + | 603 | WP_000813436.1 | hypothetical protein | - |
| NCTC86EC_RS24780 () | 5035561..5036478 | + | 918 | WP_000250228.1 | hypothetical protein | - |
| NCTC86EC_RS24785 () | 5036563..5037435 | + | 873 | WP_021532902.1 | GTPase family protein | - |
| NCTC86EC_RS24790 () | 5037807..5040653 | + | 2847 | WP_068879496.1 | Ag43/Cah family autotransporter adhesin | - |
| NCTC86EC_RS24795 () | 5040724..5040870 | + | 147 | WP_059333225.1 | DUF905 family protein | - |
| NCTC86EC_RS24800 () | 5041037..5041855 | + | 819 | WP_001234716.1 | DUF945 domain-containing protein | - |
| NCTC86EC_RS28935 () | 5041855..5042028 | + | 174 | WP_001183321.1 | hypothetical protein | - |
| NCTC86EC_RS24810 () | 5042194..5042667 | + | 474 | WP_068879497.1 | antirestriction protein | - |
| NCTC86EC_RS24815 () | 5042683..5043159 | + | 477 | WP_001186786.1 | RadC family protein | - |
| NCTC86EC_RS24820 () | 5043222..5043443 | + | 222 | WP_021532904.1 | DUF987 domain-containing protein | - |
| NCTC86EC_RS24830 () | 5043606..5043974 | + | 369 | WP_001540478.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| NCTC86EC_RS24835 () | 5044064..5044438 | + | 375 | WP_058101701.1 | TA system toxin CbtA family protein | Toxin Detail |
| NCTC86EC_RS24840 () | 5044435..5044926 | + | 492 | WP_001586604.1 | hypothetical protein | - |
| NCTC86EC_RS24845 () | 5044943..5045119 | + | 177 | WP_001586605.1 | DUF957 domain-containing protein | - |
| NCTC86EC_RS29030 () | 5045219..5045377 | + | 159 | WP_001467148.1 | hypothetical protein | - |
| NCTC86EC_RS24850 () | 5046030..5048921 | + | 2892 | WP_000580534.1 | DEAD/DEAH box helicase family protein | - |
| NCTC86EC_RS24855 () | 5048942..5052064 | + | 3123 | WP_000049823.1 | site-specific DNA-methyltransferase | - |
| NCTC86EC_RS24860 () | 5052067..5055447 | + | 3381 | WP_001085525.1 | DEAD/DEAH box helicase family protein | - |
| NCTC86EC_RS24865 () | 5055494..5055796 | - | 303 | WP_000421875.1 | hypothetical protein | - |
| NCTC86EC_RS24870 () | 5056109..5056981 | - | 873 | WP_000168560.1 | HNH endonuclease | - |
| NCTC86EC_RS27400 () | 5057063..5057185 | + | 123 | WP_001330176.1 | hypothetical protein | - |
| NCTC86EC_RS24875 () | 5057193..5058173 | - | 981 | WP_001330175.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| NCTC86EC_RS24880 () | 5058238..5059344 | - | 1107 | WP_021532906.1 | N-acetylneuraminate epimerase | - |
| NCTC86EC_RS24885 () | 5059364..5060080 | - | 717 | WP_001330173.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| NCTC86EC_RS24900 () | 5061535..5062137 | + | 603 | WP_001244604.1 | ISKra4 family transposase ISCep1 | VF |
| NCTC86EC_RS28180 () | 5062470..5063167 | + | 698 | Protein_4730 | IS1 family transposase IS1R | Transposase |
| NCTC86EC_RS24915 () | 5063392..5063988 | + | 597 | WP_000044711.1 | ISKra4 family transposase ISCep1 | VF |
| NCTC86EC_RS24920 () | 5064469..5065017 | + | 549 | WP_021532909.1 | type 1 fimbrial major subunit FimA | - |
| NCTC86EC_RS24925 () | 5065082..5065621 | + | 540 | WP_024187502.1 | type 1 fimbrial protein | - |
| NCTC86EC_RS24930 () | 5065658..5066383 | + | 726 | WP_021532911.1 | type 1 fimbria chaperone FimC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|