MGE detailed information
MGE type: Genomic_island MGE length: 45714 bp
Accession: NZ_LT601384 Location: 4754143..4799856 Organism: Escherichia coli isolate NCTC86EC Replicon: chromosome
Accession: NZ_LT601384 Location: 4754143..4799856 Organism: Escherichia coli isolate NCTC86EC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NCTC86EC_RS23285 () | 4750550..4751269 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| NCTC86EC_RS23290 () | 4751266..4752897 | - | 1632 | WP_066009715.1 | sensor histidine kinase | - |
| NCTC86EC_RS23295 () | 4753078..4753308 | + | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| NCTC86EC_RS23300 () | 4753320..4753592 | + | 273 | WP_000405651.1 | N-acetyltransferase | - |
| NCTC86EC_RS23305 () | 4753819..4754115 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | - |
| NCTC86EC_RS23310 () | 4754143..4754316 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | - |
| NCTC86EC_RS23315 () | 4754435..4755952 | - | 1518 | WP_066009713.1 | lysine--tRNA ligase | - |
| NCTC86EC_RS23320 () | 4756189..4757646 | - | 1458 | WP_066009710.1 | dipeptide/tripeptide permease DtpC | - |
| NCTC86EC_RS23325 () | 4757705..4759852 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| NCTC86EC_RS23330 () | 4759932..4761266 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| NCTC86EC_RS28715 () | 4761631..4763170 | - | 1540 | Protein_4435 | lysine decarboxylation/transport transcriptional activator CadC | - |
| NCTC86EC_RS23340 () | 4763919..4764761 | - | 843 | WP_022645115.1 | DUF4942 domain-containing protein | - |
| NCTC86EC_RS28720 () | 4764846..4765040 | - | 195 | WP_024181941.1 | DUF957 domain-containing protein | - |
| NCTC86EC_RS28725 () | 4765119..4765268 | - | 150 | Protein_4438 | hypothetical protein | - |
| NCTC86EC_RS23350 () | 4765265..4765642 | - | 378 | WP_022645116.1 | TA system toxin CbtA family protein | Toxin Detail |
| NCTC86EC_RS23355 () | 4765732..4766100 | - | 369 | WP_001280951.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| NCTC86EC_RS23365 () | 4766263..4766484 | - | 222 | WP_021532904.1 | DUF987 domain-containing protein | - |
| NCTC86EC_RS23370 () | 4766547..4767023 | - | 477 | WP_001186786.1 | RadC family protein | - |
| NCTC86EC_RS23375 () | 4767039..4767518 | - | 480 | WP_001564060.1 | antirestriction protein | - |
| NCTC86EC_RS23380 () | 4767784..4768602 | - | 819 | WP_001175165.1 | DUF945 domain-containing protein | - |
| NCTC86EC_RS23385 () | 4768692..4768925 | - | 234 | WP_001278293.1 | DUF905 family protein | - |
| NCTC86EC_RS23390 () | 4768931..4769608 | - | 678 | WP_001097302.1 | hypothetical protein | - |
| NCTC86EC_RS23395 () | 4769756..4770436 | - | 681 | WP_001282921.1 | WYL domain-containing protein | - |
| NCTC86EC_RS23405 () | 4770639..4771523 | - | 885 | WP_001116795.1 | 50S ribosome-binding GTPase | - |
| NCTC86EC_RS23410 () | 4771624..4772847 | + | 1224 | WP_001107219.1 | hypothetical protein | - |
| NCTC86EC_RS23420 () | 4774010..4774540 | - | 531 | WP_000778605.1 | hypothetical protein | - |
| NCTC86EC_RS23425 () | 4775210..4775941 | + | 732 | WP_001075495.1 | inovirus Gp2 family protein | - |
| NCTC86EC_RS23435 () | 4776463..4776915 | + | 453 | WP_066009063.1 | N-acetyltransferase | - |
| NCTC86EC_RS23440 () | 4777451..4778386 | + | 936 | WP_000332862.1 | pseudouridine kinase | - |
| NCTC86EC_RS23445 () | 4778379..4779314 | + | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| NCTC86EC_RS23450 () | 4779398..4780648 | + | 1251 | WP_001328687.1 | NupC/NupG family nucleoside CNT transporter | - |
| NCTC86EC_RS23455 () | 4780667..4781761 | - | 1095 | WP_000370278.1 | sugar kinase | - |
| NCTC86EC_RS23460 () | 4783062..4783628 | + | 567 | WP_001126810.1 | inovirus-type Gp2 protein | - |
| NCTC86EC_RS23465 () | 4783886..4784461 | + | 576 | WP_001564054.1 | hypothetical protein | - |
| NCTC86EC_RS23470 () | 4784530..4784763 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| NCTC86EC_RS28115 () | 4784775..4785000 | + | 226 | Protein_4460 | hypothetical protein | - |
| NCTC86EC_RS23475 () | 4785062..4785328 | - | 267 | Protein_4461 | IS3 family transposase IS2 | Transposase |
| NCTC86EC_RS23480 () | 4785419..4786576 | + | 1158 | Protein_4462 | Multidrug resistance protein MexB | VF |
| NCTC86EC_RS28120 () | 4786697..4787346 | + | 650 | Protein_4463 | TetR/AcrR family transcriptional regulator | - |
| NCTC86EC_RS27240 () | 4787369..4787662 | + | 294 | Protein_4464 | helix-turn-helix domain-containing protein | - |
| NCTC86EC_RS23495 () | 4788019..4788564 | - | 546 | WP_001564047.1 | propanediol utilization system shell hexameric protein GrpS | - |
| NCTC86EC_RS23500 () | 4788609..4789760 | - | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| NCTC86EC_RS23505 () | 4789889..4790944 | - | 1056 | WP_000494233.1 | HTH-type transcriptional activator RhaR | VF |
| NCTC86EC_RS23510 () | 4790961..4792223 | - | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| NCTC86EC_RS23515 () | 4792773..4793366 | - | 594 | Protein_4469 | maturase | - |
| NCTC86EC_RS23520 () | 4793366..4793735 | - | 370 | Protein_4470 | reverse transcriptase/maturase | - |
| NCTC86EC_RS23525 () | 4794347..4795252 | - | 906 | WP_001086421.1 | propanediol utilization system permease GrpO | - |
| NCTC86EC_RS23530 () | 4795389..4796306 | - | 918 | WP_001044977.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| NCTC86EC_RS23535 () | 4796415..4798967 | - | 2553 | WP_022645121.1 | glycyl radical diol dehydratase GrpM | - |
| NCTC86EC_RS23540 () | 4799016..4799591 | - | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| NCTC86EC_RS23545 () | 4799602..4799901 | - | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| NCTC86EC_RS23550 () | 4799925..4801442 | - | 1518 | WP_022645122.1 | propanediol utilization system aldehyde dehydrogenase GrpJ | - |
| NCTC86EC_RS23555 () | 4801503..4802288 | - | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| NCTC86EC_RS23560 () | 4802310..4802591 | - | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| NCTC86EC_RS23565 () | 4802876..4804072 | - | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| NCTC86EC_RS23570 () | 4804101..4804598 | - | 498 | WP_001301167.1 | propanediol utilization system heme-binding protein GrpF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|