MGE detailed information
MGE type: Genomic_island MGE length: 11675 bp
Accession: NZ_LT594504 Location: 4218314..4229988 Organism: Escherichia coli isolate E. coli RL465 Replicon: chromosome
Accession: NZ_LT594504 Location: 4218314..4229988 Organism: Escherichia coli isolate E. coli RL465 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RL465_RS20335 () | 4214639..4215847 | - | 1209 | WP_001297162.1 | propionate kinase | - |
| RL465_RS20340 () | 4215873..4217204 | - | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| RL465_RS20345 () | 4217226..4218215 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| RL465_RS20350 () | 4218314..4219252 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| RL465_RS25495 () | 4219567..4219785 | + | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| RL465_RS20360 () | 4220041..4220580 | + | 540 | WP_000675746.1 | hypothetical protein | - |
| RL465_RS20365 () | 4220602..4221789 | + | 1188 | WP_000484577.1 | YhaC family protein | - |
| RL465_RS20375 () | 4222812..4223957 | - | 1146 | WP_001299416.1 | glycerate 2-kinase | - |
| RL465_RS20380 () | 4224054..4224944 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| RL465_RS20385 () | 4224974..4225744 | - | 771 | WP_001058214.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| RL465_RS20390 () | 4225760..4227094 | - | 1335 | WP_000599652.1 | galactarate/glucarate/glycerate transporter GarP | - |
| RL465_RS20395 () | 4227469..4229040 | + | 1572 | WP_001273761.1 | galactarate dehydratase | - |
| RL465_RS20400 () | 4229189..4229524 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| RL465_RS20405 () | 4229524..4229988 | + | 465 | WP_000347251.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| RL465_RS20410 () | 4230043..4230852 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| RL465_RS20415 () | 4231101..4232381 | + | 1281 | WP_000681903.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| RL465_RS20420 () | 4232404..4232877 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| RL465_RS20425 () | 4232888..4233667 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| RL465_RS20430 () | 4233657..4234535 | + | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| RL465_RS20435 () | 4234553..4234987 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|