MGE detailed information
MGE type: Genomic_island MGE length: 24142 bp
Accession: NZ_LT594504 Location: 4030338..4054479 Organism: Escherichia coli isolate E. coli RL465 Replicon: chromosome
Accession: NZ_LT594504 Location: 4030338..4054479 Organism: Escherichia coli isolate E. coli RL465 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RL465_RS19430 () | 4027996..4030182 | + | 2187 | WP_074417316.1 | hypothetical protein | - |
| RL465_RS19435 () | 4030338..4031031 | + | 694 | Protein_3795 | IS5 family transposase ISKpn26 | Transposase |
| RL465_RS19440 () | 4031246..4031671 | - | 426 | WP_063100935.1 | hypothetical protein | - |
| RL465_RS19445 () | 4031668..4032051 | - | 384 | WP_021564611.1 | hypothetical protein | - |
| RL465_RS19450 () | 4032138..4032278 | - | 141 | WP_001736895.1 | hypothetical protein | - |
| RL465_RS19455 () | 4032433..4033032 | - | 600 | WP_061359769.1 | inovirus-type Gp2 protein | - |
| RL465_RS19460 () | 4033264..4033413 | - | 150 | WP_171870245.1 | hemolysin activation protein | - |
| RL465_RS19465 () | 4034397..4035188 | + | 792 | WP_021536657.1 | hypothetical protein | - |
| RL465_RS19470 () | 4035573..4035779 | + | 207 | WP_021517769.1 | AlpA family transcriptional regulator | - |
| RL465_RS19475 () | 4035873..4036475 | + | 603 | WP_021527306.1 | hypothetical protein | - |
| RL465_RS19480 () | 4037307..4037543 | + | 237 | Protein_3804 | IS21 family transposase | - |
| RL465_RS19485 () | 4037587..4037742 | + | 156 | Protein_3805 | AAA family ATPase | - |
| RL465_RS19490 () | 4038218..4038479 | + | 262 | Protein_3806 | hypothetical protein | - |
| RL465_RS19495 () | 4038874..4040021 | + | 1148 | Protein_3807 | hypothetical protein | - |
| RL465_RS19500 () | 4040883..4042001 | + | 1119 | WP_000375614.1 | hypothetical protein | - |
| RL465_RS19505 () | 4042092..4042439 | + | 348 | WP_000569129.1 | GNAT family N-acetyltransferase | - |
| RL465_RS19510 () | 4042585..4043325 | - | 741 | WP_000960228.1 | DUF2971 domain-containing protein | - |
| RL465_RS19515 () | 4043679..4044551 | + | 873 | WP_001367651.1 | GTPase family protein | - |
| RL465_RS19520 () | 4044923..4047769 | + | 2847 | WP_171870240.1 | Ag43/Cah family autotransporter adhesin | - |
| RL465_RS19525 () | 4047888..4050404 | + | 2517 | WP_074417291.1 | hypothetical protein | - |
| RL465_RS19530 () | 4050480..4050935 | + | 456 | WP_000581504.1 | hypothetical protein | - |
| RL465_RS19535 () | 4051014..4051247 | + | 234 | WP_001119729.1 | DUF905 family protein | - |
| RL465_RS19540 () | 4051347..4052165 | + | 819 | WP_074417292.1 | DUF945 domain-containing protein | - |
| RL465_RS19545 () | 4052220..4052705 | + | 486 | WP_032286264.1 | antirestriction protein | - |
| RL465_RS19550 () | 4052721..4053197 | + | 477 | WP_001186727.1 | RadC family protein | - |
| RL465_RS19555 () | 4053260..4053481 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| RL465_RS19560 () | 4053644..4054012 | + | 369 | WP_074417293.1 | type IV toxin-antitoxin system toxin CbtA | Antitoxin Detail |
| RL465_RS19565 () | 4054102..4054479 | + | 378 | WP_001094448.1 | TA system toxin CbtA family protein | Toxin Detail |
| RL465_RS19570 () | 4054476..4054964 | + | 489 | WP_000761714.1 | hypothetical protein | - |
| RL465_RS19575 () | 4054976..4055173 | + | 198 | WP_000839243.1 | DUF957 domain-containing protein | - |
| RL465_RS19580 () | 4055258..4056100 | + | 843 | WP_021532534.1 | DUF4942 domain-containing protein | - |
| RL465_RS19585 () | 4056381..4056917 | - | 537 | WP_000942786.1 | GspM family type II secretion system protein YghD | - |
| RL465_RS19590 () | 4056919..4058097 | - | 1179 | WP_000094970.1 | type II secretion system protein GspL | - |
| RL465_RS19595 () | 4058094..4059071 | - | 978 | WP_000633220.1 | type II secretion system minor pseudopilin GspK | - |
| RL465_RS19600 () | 4059074..4059277 | - | 204 | Protein_3828 | type II secretion system protein GspJ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|