MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 70584 bp
Accession: NZ_LT222314 Location: 1..70584 Organism: Pseudomonas cerasi isolate Sour cherry (Prunus cerasus) symptomatic leaf Replicon: plasmid p58T2
Accession: NZ_LT222314 Location: 1..70584 Organism: Pseudomonas cerasi isolate Sour cherry (Prunus cerasus) symptomatic leaf Replicon: plasmid p58T2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PCPL58_RS00535 () | 418..941 | - | 524 | Protein_1 | IS5 family transposase ISPs1 | Transposase |
| PCPL58_RS28595 () | 1467..1652 | + | 186 | WP_080268116.1 | Com family DNA-binding transcriptional regulator | - |
| PCPL58_RS00540 () | 1664..2959 | + | 1296 | WP_065348586.1 | glycoside hydrolase family 68 protein | - |
| PCPL58_RS00545 () | 3044..4225 | + | 1182 | WP_011169845.1 | glycoside hydrolase family 10 protein | - |
| PCPL58_RS00550 () | 5031..5654 | + | 624 | WP_005771831.1 | glycoside hydrolase family 25 protein | - |
| PCPL58_RS00555 () | 6827..8365 | + | 1539 | WP_065348587.1 | type III effector | - |
| PCPL58_RS00560 () | 8432..8659 | + | 228 | WP_080268299.1 | phosphoribulokinase | - |
| PCPL58_RS28605 () | 8966..9460 | - | 495 | Protein_8 | relaxase | - |
| PCPL58_RS00570 () | 9456..9863 | - | 408 | Protein_9 | DUF945 domain-containing protein | - |
| PCPL58_RS00575 () | 9910..10288 | - | 379 | Protein_10 | hypothetical protein | - |
| PCPL58_RS00580 () | 10748..11164 | - | 417 | WP_002556003.1 | hypothetical protein | - |
| PCPL58_RS00585 () | 11226..11513 | - | 288 | WP_002556002.1 | helix-turn-helix domain-containing protein | - |
| PCPL58_RS00590 () | 11513..11851 | - | 339 | WP_054071658.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PCPL58_RS00595 () | 12059..12679 | + | 621 | WP_065348589.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| PCPL58_RS00610 () | 13548..15578 | + | 2031 | WP_065348591.1 | hypothetical protein | - |
| PCPL58_RS28620 () | 16041..16355 | + | 315 | Protein_16 | transposase | - |
| PCPL58_RS00620 () | 16442..17464 | + | 1023 | WP_002551322.1 | IS21 family transposase ISPsy4 | Transposase |
| PCPL58_RS00625 () | 17461..18270 | + | 810 | WP_005741073.1 | IS21 family transposase ISPsy4 | Transposase |
| PCPL58_RS00630 () | 18321..18614 | + | 294 | Protein_19 | IS5 family transposase IS52 | Transposase |
| PCPL58_RS00635 () | 18760..18981 | - | 222 | WP_065348594.1 | hypothetical protein | - |
| PCPL58_RS00640 () | 19019..19432 | - | 414 | WP_060402542.1 | TraR/DksA family transcriptional regulator | - |
| PCPL58_RS00645 () | 19468..19692 | - | 225 | WP_060402543.1 | carbon storage regulator | - |
| PCPL58_RS00650 () | 19743..20297 | - | 555 | WP_065348595.1 | hypothetical protein | - |
| PCPL58_RS30405 () | 21279..21779 | + | 501 | Protein_24 | Protein hcp1 | VF |
| PCPL58_RS00660 () | 21802..22329 | + | 528 | WP_004661067.1 | DUF2778 domain-containing protein | - |
| PCPL58_RS00670 () | 22719..23087 | + | 369 | WP_080543604.1 | IS66 family transposase ISPpu19 | Transposase |
| PCPL58_RS30410 () | 23084..23419 | + | 336 | WP_031598365.1 | IS66 family transposase ISPsy43 | Transposase |
| PCPL58_RS31635 () | 23503..23691 | + | 189 | Protein_28 | IS66 family transposase ISPsy43 | Transposase |
| PCPL58_RS00685 () | 23834..24223 | + | 390 | WP_080439472.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| PCPL58_RS00690 () | 24474..26669 | + | 2196 | WP_005740946.1 | hypothetical protein | - |
| PCPL58_RS30415 () | 27371..27505 | + | 135 | Protein_31 | IS5/IS1182 family transposase | - |
| PCPL58_RS00695 () | 27526..29139 | - | 1614 | WP_031598748.1 | Methyl-accepting chemotaxis protein CtpH | VF |
| PCPL58_RS00700 () | 29323..29943 | - | 621 | WP_065348589.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| PCPL58_RS00705 () | 30151..30489 | + | 339 | WP_054071658.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PCPL58_RS00710 () | 30489..30776 | + | 288 | WP_002556002.1 | helix-turn-helix domain-containing protein | - |
| PCPL58_RS00715 () | 30838..31254 | + | 417 | WP_002556003.1 | hypothetical protein | - |
| PCPL58_RS00720 () | 31521..32244 | + | 724 | Protein_37 | hypothetical protein | - |
| PCPL58_RS00725 () | 33480..33761 | + | 282 | WP_065348597.1 | hypothetical protein | - |
| PCPL58_RS00730 () | 33742..34935 | + | 1194 | Protein_39 | IS91 family transposase | - |
| PCPL58_RS00735 () | 35422..41161 | + | 5740 | Protein_40 | type III effector | - |
| PCPL58_RS00740 () | 41362..41634 | - | 273 | WP_003348606.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PCPL58_RS00745 () | 41624..41809 | - | 186 | WP_005730485.1 | hypothetical protein | Antitoxin Detail |
| PCPL58_RS00750 () | 41860..42138 | - | 279 | WP_003320513.1 | hypothetical protein | - |
| PCPL58_RS00755 () | 42231..42866 | - | 636 | WP_065348598.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| PCPL58_RS00760 () | 43113..44093 | + | 981 | Protein_45 | Y-family DNA polymerase | - |
| PCPL58_RS30420 () | 44283..44513 | + | 231 | WP_081591423.1 | DUF4113 domain-containing protein | - |
| PCPL58_RS31330 () | 44547..44816 | - | 270 | WP_024421178.1 | hypothetical protein | - |
| PCPL58_RS00775 () | 45017..46021 | - | 1005 | WP_005615818.1 | ParB/RepB/Spo0J family partition protein | - |
| PCPL58_RS00780 () | 46122..47249 | - | 1128 | WP_065348599.1 | ParA family protein | - |
| PCPL58_RS00785 () | 47989..49488 | + | 1500 | WP_104685638.1 | IS21 family transposase ISPsy20 | Transposase |
| PCPL58_RS00790 () | 49481..50284 | + | 804 | WP_031598096.1 | IS21 family transposase ISPsy20 | Transposase |
| PCPL58_RS00795 () | 50810..51091 | + | 282 | WP_024421360.1 | hypothetical protein | - |
| PCPL58_RS00800 () | 51231..53177 | - | 1947 | WP_065348601.1 | hypothetical protein | - |
| PCPL58_RS00805 () | 53174..54238 | - | 1065 | WP_024420725.1 | type III secretion system chaperone | - |
| PCPL58_RS00810 () | 54701..55042 | + | 342 | WP_083188277.1 | hypothetical protein | - |
| PCPL58_RS00815 () | 55083..55334 | + | 252 | WP_024421558.1 | hypothetical protein | - |
| PCPL58_RS00820 () | 55344..55568 | + | 225 | WP_044310806.1 | carbon storage regulator | - |
| PCPL58_RS00825 () | 56147..57376 | + | 1230 | WP_065348602.1 | IS91 family transposase IS801 | Transposase |
| PCPL58_RS28675 () | 57664..58173 | + | 510 | WP_005735414.1 | peptide deformylase | - |
| PCPL58_RS00835 () | 58317..58590 | + | 274 | Protein_60 | IS21 family transposase ISPst3 | Transposase |
| PCPL58_RS00840 () | 58795..59766 | + | 972 | WP_065348610.1 | isopenicillin N synthase family oxygenase | - |
| PCPL58_RS00845 () | 59808..61259 | + | 1452 | WP_065348603.1 | FAD-binding oxidoreductase | - |
| PCPL58_RS00850 () | 61303..61798 | + | 496 | Protein_63 | DNA polymerase V subunit UmuC | - |
| PCPL58_RS28680 () | 62016..62159 | - | 144 | WP_157893868.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| PCPL58_RS00855 () | 62439..63416 | + | 978 | WP_065348561.1 | IS5 family transposase ISPssy | Transposase |
| PCPL58_RS00860 () | 63702..64568 | - | 867 | WP_157893869.1 | hypothetical protein | - |
| PCPL58_RS00865 () | 64638..64919 | + | 282 | WP_065348597.1 | hypothetical protein | - |
| PCPL58_RS00870 () | 64900..66129 | + | 1230 | WP_065348605.1 | IS91 family transposase | - |
| PCPL58_RS00875 () | 66312..66833 | - | 522 | Protein_69 | GNAT family N-acetyltransferase | - |
| PCPL58_RS00880 () | 67073..67360 | - | 288 | WP_004667956.1 | HU family DNA-binding protein | - |
| PCPL58_RS00885 () | 67586..68893 | - | 1308 | WP_065348606.1 | replication initiation protein | - |
| PCPL58_RS00890 () | 69254..69451 | - | 198 | WP_010209245.1 | ribbon-helix-helix protein, CopG family | - |
| PCPL58_RS00895 () | 69671..70099 | - | 429 | WP_057434187.1 | GntR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|