MGE detailed information
MGE type: Genomic_island MGE length: 80280 bp
Accession: NZ_LS998783 Location: 2693900..2774179 Organism: Pseudomonas aeruginosa isolate Replicon: chromosome
Accession: NZ_LS998783 Location: 2693900..2774179 Organism: Pseudomonas aeruginosa isolate Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PA5486_RS13380 () | 2689022..2689255 | + | 234 | WP_003090686.1 | hypothetical protein | - |
| PA5486_RS13385 () | 2689472..2689741 | + | 270 | WP_169057986.1 | DUF3509 domain-containing protein | - |
| PA5486_RS13390 () | 2690068..2690244 | - | 177 | WP_003099098.1 | hypothetical protein | - |
| PA5486_RS13395 () | 2690329..2690655 | - | 327 | WP_003090681.1 | hypothetical protein | - |
| PA5486_RS13400 () | 2690847..2691710 | + | 864 | WP_003122565.1 | alpha/beta hydrolase | - |
| PA5486_RS13410 () | 2691960..2693882 | + | 1923 | WP_003090677.1 | threonine--tRNA ligase | - |
| PA5486_RS13415 () | 2693882..2694433 | + | 552 | WP_003119938.1 | translation initiation factor IF-3 | - |
| PA5486_RS13420 () | 2694495..2694689 | + | 195 | WP_003090673.1 | 50S ribosomal protein L35 | - |
| PA5486_RS13425 () | 2694713..2695069 | + | 357 | WP_003099086.1 | 50S ribosomal protein L20 | - |
| PA5486_RS13430 () | 2695167..2696183 | + | 1017 | WP_003090666.1 | phenylalanine--tRNA ligase subunit alpha | - |
| PA5486_RS13435 () | 2696218..2698596 | + | 2379 | WP_015649026.1 | phenylalanine--tRNA ligase subunit beta | - |
| PA5486_RS13440 () | 2698600..2698902 | + | 303 | WP_003090661.1 | integration host factor subunit alpha | - |
| PA5486_RS13445 () | 2698883..2699239 | + | 357 | WP_003090655.1 | MerR family transcriptional regulator | - |
| PA5486_RS13455 () | 2699979..2701931 | + | 1953 | WP_033895410.1 | AAA family ATPase | - |
| PA5486_RS13460 () | 2701928..2703595 | + | 1668 | WP_025297468.1 | ATP-dependent helicase | - |
| PA5486_RS13465 () | 2704700..2705716 | - | 1017 | WP_032728035.1 | IS30 family transposase IS1394 | Transposase |
| PA5486_RS13470 () | 2706096..2707241 | + | 1146 | WP_124108033.1 | hypothetical protein | - |
| PA5486_RS13475 () | 2707418..2708095 | + | 678 | WP_025297466.1 | inovirus Gp2 family protein | - |
| PA5486_RS13480 () | 2708130..2708324 | + | 195 | WP_025297465.1 | AlpA family transcriptional regulator | - |
| PA5486_RS13485 () | 2708520..2709014 | - | 495 | WP_025297464.1 | DNA repair protein RadC | - |
| PA5486_RS13490 () | 2709134..2709598 | - | 465 | WP_025297463.1 | hypothetical protein | - |
| PA5486_RS13495 () | 2709606..2710619 | - | 1014 | WP_025297462.1 | hypothetical protein | - |
| PA5486_RS13500 () | 2710794..2711141 | + | 348 | WP_025297461.1 | helix-turn-helix domain-containing protein | - |
| PA5486_RS13505 () | 2711487..2712380 | - | 894 | WP_025297460.1 | hypothetical protein | - |
| PA5486_RS13510 () | 2712473..2713477 | - | 1005 | WP_025297459.1 | YqaJ viral recombinase family protein | - |
| PA5486_RS13515 () | 2713554..2714522 | - | 969 | WP_025297458.1 | DUF932 domain-containing protein | - |
| PA5486_RS13520 () | 2714625..2714954 | - | 330 | WP_031692728.1 | hypothetical protein | - |
| PA5486_RS13525 () | 2715302..2715970 | + | 669 | WP_071534660.1 | hypothetical protein | - |
| PA5486_RS13530 () | 2715967..2717073 | + | 1107 | WP_025297456.1 | XRE family transcriptional regulator | - |
| PA5486_RS13535 () | 2717204..2719345 | + | 2142 | WP_025297455.1 | hypothetical protein | - |
| PA5486_RS13540 () | 2719503..2719748 | + | 246 | WP_025297454.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| PA5486_RS13545 () | 2719738..2720019 | + | 282 | WP_025297453.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PA5486_RS13550 () | 2720425..2721006 | - | 582 | WP_033895412.1 | plasmid pRiA4b ORF-3 family protein | - |
| PA5486_RS13555 () | 2721020..2721895 | - | 876 | WP_033895413.1 | WYL domain-containing protein | - |
| PA5486_RS13560 () | 2722030..2723604 | + | 1575 | WP_025297452.1 | DNA recombination protein RmuC | - |
| PA5486_RS13565 () | 2723628..2724276 | + | 649 | Protein_2612 | peptidase M15 | - |
| PA5486_RS13570 () | 2724440..2725300 | + | 861 | WP_025297451.1 | hypothetical protein | - |
| PA5486_RS13575 () | 2725450..2725653 | + | 204 | WP_025297450.1 | helix-turn-helix domain-containing protein | - |
| PA5486_RS13580 () | 2725646..2726257 | + | 612 | WP_025297449.1 | DUF1819 family protein | - |
| PA5486_RS13585 () | 2726281..2726910 | + | 630 | WP_196692495.1 | DUF1788 domain-containing protein | - |
| PA5486_RS13590 () | 2726922..2730476 | + | 3555 | WP_025297447.1 | BREX system P-loop protein BrxC | - |
| PA5486_RS13595 () | 2730737..2731072 | + | 336 | WP_023105889.1 | IS66 family transposase ISSal1 | Transposase |
| PA5486_RS13600 () | 2731108..2731404 | + | 297 | WP_196612410.1 | IS66 family transposase ISPpu30 | Transposase |
| PA5486_RS13605 () | 2731468..2732979 | + | 1512 | WP_023105887.1 | IS66 family transposase ISPsy43 | Transposase |
| PA5486_RS13610 () | 2732979..2734745 | + | 1767 | WP_033981139.1 | BREX-1 system adenine-specific DNA-methyltransferase PglX | - |
| PA5486_RS13615 () | 2734742..2735881 | + | 1140 | WP_025297774.1 | ATP-binding protein | - |
| PA5486_RS13620 () | 2735881..2736438 | + | 558 | WP_025297775.1 | hypothetical protein | - |
| PA5486_RS13625 () | 2736957..2737508 | + | 552 | Protein_2624 | RNA-directed DNA polymerase | - |
| PA5486_RS13630 () | 2737624..2739123 | + | 1500 | WP_101516663.1 | IS21 family transposase ISPst3 | Transposase |
| PA5486_RS13635 () | 2739116..2739919 | + | 804 | WP_011911830.1 | IS21 family transposase ISPst3 | Transposase |
| PA5486_RS13640 () | 2740090..2742069 | + | 1980 | Protein_2627 | Reverse transcriptase | - |
| PA5486_RS13645 () | 2742096..2743847 | + | 1752 | WP_197270530.1 | BREX-1 system adenine-specific DNA-methyltransferase PglX | - |
| PA5486_RS13650 () | 2743851..2745722 | + | 1872 | WP_025298036.1 | DUF262 domain-containing protein | - |
| PA5486_RS13655 () | 2745719..2748226 | + | 2508 | WP_025298035.1 | BREX-1 system phosphatase PglZ type A | - |
| PA5486_RS13660 () | 2748239..2750335 | + | 2097 | WP_033895418.1 | BREX system Lon protease-like protein BrxL | - |
| PA5486_RS13665 () | 2750480..2751862 | - | 1383 | WP_025298034.1 | Anaerobic glycerol-3-phosphate dehydrogenase subunit A ; Integrase | Integrase |
| PA5486_RS13670 () | 2752722..2754647 | + | 1926 | WP_015649025.1 | type I restriction-modification system subunit M | - |
| PA5486_RS13675 () | 2754637..2755932 | + | 1296 | WP_134163229.1 | restriction endonuclease subunit S | - |
| PA5486_RS13680 () | 2755921..2756937 | - | 1017 | WP_032728035.1 | IS30 family transposase IS1394 | Transposase |
| PA5486_RS13685 () | 2757258..2759453 | + | 2196 | WP_025297974.1 | anti-phage defense ZorAB system ZorA | - |
| PA5486_RS13690 () | 2759467..2760204 | + | 738 | WP_015649022.1 | OmpA family protein | - |
| PA5486_RS13695 () | 2760205..2761848 | + | 1644 | WP_015649021.1 | hypothetical protein | - |
| PA5486_RS13700 () | 2761848..2765099 | + | 3252 | WP_015649020.1 | DEAD/DEAH box helicase | - |
| PA5486_RS13705 () | 2765170..2768022 | + | 2853 | WP_033895419.1 | AAA family ATPase | - |
| PA5486_RS13710 () | 2768076..2769326 | + | 1251 | WP_045175673.1 | McrC family protein | - |
| PA5486_RS13715 () | 2769348..2772449 | + | 3102 | WP_025297899.1 | type I restriction endonuclease subunit R | - |
| PA5486_RS13730 () | 2773955..2774179 | - | 225 | WP_003114399.1 | type I toxin-antitoxin system SymE family toxin | - |
| PA5486_RS13735 () | 2774501..2775850 | - | 1350 | WP_015649013.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|