MGE detailed information
MGE type: Mobilizable plasmid MGE length: 64687 bp
Accession: NZ_LS992189 Location: 1..64687 Organism: Escherichia coli isolate Escherichia coli str. 3426 Replicon: plasmid 5
Accession: NZ_LS992189 Location: 1..64687 Organism: Escherichia coli isolate Escherichia coli str. 3426 Replicon: plasmid 5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EC3426_RS26345 () | 1..1768 | + | 1768 | Protein_0 | conjugal transfer protein | - |
| EC3426_RS26355 () | 1930..2663 | + | 734 | Protein_1 | Type IV secretion system protein virB8 | VF |
| EC3426_RS26360 () | 2729..3430 | + | 702 | WP_000274524.1 | Type IV secretion system protein PtlF | VF |
| EC3426_RS26365 () | 3420..4559 | + | 1140 | WP_001708010.1 | Type IV secretion system protein virB10 | VF |
| EC3426_RS26370 () | 4578..5633 | + | 1056 | WP_020314921.1 | Type IV secretion system protein VirB11 | VF |
| EC3426_RS26375 () | 5649..7607 | + | 1959 | WP_000338974.1 | type IV secretory system conjugative DNA transfer family protein | - |
| EC3426_RS26380 () | 7654..8172 | + | 519 | WP_001708008.1 | ATP-binding protein | - |
| EC3426_RS26385 () | 8165..9808 | + | 1644 | WP_001035590.1 | Outer membrane lipoprotein BfpB | VF |
| EC3426_RS26390 () | 9847..11169 | + | 1323 | WP_000454143.1 | type 4b pilus protein PilO2 | - |
| EC3426_RS26395 () | 11153..11647 | + | 495 | WP_000912551.1 | type IV pilus biogenesis protein PilP | - |
| EC3426_RS26400 () | 11672..13210 | + | 1539 | WP_001420475.1 | Type II secretion system protein E | VF |
| EC3426_RS26405 () | 13201..14310 | + | 1110 | WP_000974900.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| EC3426_RS26410 () | 14355..14912 | + | 558 | WP_000095051.1 | hypothetical protein | - |
| EC3426_RS26415 () | 14979..15461 | + | 483 | WP_001258095.1 | hypothetical protein | VF |
| EC3426_RS26420 () | 15465..16100 | + | 636 | WP_000934978.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| EC3426_RS26425 () | 16113..17489 | + | 1377 | WP_000750519.1 | hypothetical protein | VF |
| EC3426_RS26430 () | 17486..17581 | - | 96 | Protein_16 | prepilin | - |
| EC3426_RS26435 () | 18003..19127 | + | 1125 | WP_000486719.1 | site-specific integrase | - |
| EC3426_RS26440 () | 19187..19729 | + | 543 | WP_050558951.1 | thermonuclease family protein | - |
| EC3426_RS26445 () | 19823..21499 | + | 1677 | WP_001542048.1 | PcfJ domain-containing protein | - |
| EC3426_RS26450 () | 21670..22245 | + | 576 | WP_001542046.1 | hypothetical protein | - |
| EC3426_RS26455 () | 22250..24406 | + | 2157 | WP_001542045.1 | type IA DNA topoisomerase | - |
| EC3426_RS26460 () | 24650..24862 | + | 213 | WP_001542044.1 | hypothetical protein | - |
| EC3426_RS26465 () | 24884..25189 | + | 306 | WP_001542042.1 | hypothetical protein | - |
| EC3426_RS26470 () | 25309..25515 | + | 207 | WP_001542039.1 | hemolysin expression modulator Hha | - |
| EC3426_RS26475 () | 25850..26104 | + | 255 | WP_133963914.1 | hypothetical protein | - |
| EC3426_RS26480 () | 26111..26389 | + | 279 | WP_133963901.1 | hypothetical protein | - |
| EC3426_RS26485 () | 26624..26842 | + | 219 | WP_133963916.1 | hypothetical protein | - |
| EC3426_RS26495 () | 27279..27518 | + | 240 | WP_001434418.1 | hypothetical protein | - |
| EC3426_RS27070 () | 27570..28010 | + | 441 | WP_160379985.1 | hypothetical protein | - |
| EC3426_RS26500 () | 28052..32329 | - | 4278 | WP_133963903.1 | relaxase | - |
| EC3426_RS26505 () | 32326..32667 | - | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| EC3426_RS26510 () | 33038..33439 | + | 402 | WP_000717860.1 | hypothetical protein | - |
| EC3426_RS26515 () | 33457..34209 | + | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| EC3426_RS26520 () | 34211..34918 | + | 708 | WP_000108796.1 | hypothetical protein | - |
| EC3426_RS26525 () | 34938..35357 | + | 420 | WP_001708405.1 | hypothetical protein | - |
| EC3426_RS26530 () | 35359..35622 | + | 264 | WP_000224227.1 | hypothetical protein | - |
| EC3426_RS26535 () | 35659..35837 | + | 179 | Protein_37 | hypothetical protein | - |
| EC3426_RS26545 () | 36171..36491 | + | 321 | WP_133963906.1 | hypothetical protein | - |
| EC3426_RS26550 () | 36622..37059 | - | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| EC3426_RS26555 () | 37084..37266 | - | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| EC3426_RS26560 () | 37811..37993 | + | 183 | WP_001401700.1 | hypothetical protein | - |
| EC3426_RS26565 () | 38380..38640 | - | 261 | WP_020314977.1 | hypothetical protein | - |
| EC3426_RS26580 () | 39175..39414 | - | 240 | WP_022540736.1 | transcriptional regulator | Antitoxin Detail |
| EC3426_RS26585 () | 39404..39664 | - | 261 | WP_020314676.1 | hypothetical protein | Toxin Detail |
| EC3426_RS26590 () | 39716..39940 | - | 225 | WP_000814381.1 | hypothetical protein | - |
| EC3426_RS26595 () | 40037..40246 | - | 210 | WP_020314678.1 | hypothetical protein | - |
| EC3426_RS26600 () | 40289..40612 | - | 324 | WP_020314677.1 | hypothetical protein | - |
| EC3426_RS26610 () | 41193..41435 | - | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| EC3426_RS26615 () | 41432..41686 | - | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| EC3426_RS26620 () | 41683..42225 | - | 543 | WP_001083904.1 | hypothetical protein | - |
| EC3426_RS26625 () | 42329..42844 | - | 516 | WP_001025393.1 | J domain-containing protein | - |
| EC3426_RS26630 () | 43248..43577 | - | 330 | WP_001542022.1 | hypothetical protein | - |
| EC3426_RS26635 () | 44164..44829 | + | 666 | WP_000532148.1 | P-loop NTPase | - |
| EC3426_RS27170 () | 44903..45187 | + | 285 | WP_001162371.1 | hypothetical protein | - |
| EC3426_RS26645 () | 45205..45801 | - | 597 | WP_000125164.1 | hypothetical protein | - |
| EC3426_RS26650 () | 45951..46112 | - | 162 | WP_001434039.1 | type I toxin-antitoxin system Hok family toxin | - |
| EC3426_RS27075 () | 46306..46467 | - | 162 | WP_001128311.1 | hypothetical protein | - |
| EC3426_RS26665 () | 47521..48549 | - | 1029 | WP_020314815.1 | RepA protein, IncFII family | - |
| EC3426_RS26670 () | 49627..50133 | + | 507 | WP_001358485.1 | CaiF/GrlA family transcriptional regulator | - |
| EC3426_RS26675 () | 50126..50320 | + | 195 | WP_000049865.1 | DUF1187 family protein | - |
| EC3426_RS26680 () | 50366..51319 | + | 954 | WP_072105959.1 | SPFH/Band 7/PHB domain protein | - |
| EC3426_RS26690 () | 51699..52142 | + | 444 | WP_000964840.1 | NfeD family protein | - |
| EC3426_RS27080 () | 52146..52316 | + | 171 | WP_000550721.1 | hypothetical protein | - |
| EC3426_RS26695 () | 52327..52989 | + | 663 | WP_020314922.1 | hypothetical protein | - |
| EC3426_RS26705 () | 53173..53388 | + | 216 | WP_001360344.1 | hypothetical protein | - |
| EC3426_RS26710 () | 53404..53706 | + | 303 | WP_001360345.1 | hypothetical protein | - |
| EC3426_RS26715 () | 53703..53960 | + | 258 | WP_000739144.1 | hypothetical protein | - |
| EC3426_RS26720 () | 53964..54950 | + | 987 | WP_001419739.1 | type IV secretion system protein | - |
| EC3426_RS26725 () | 54956..55603 | + | 648 | WP_133963910.1 | hypothetical protein | VF |
| EC3426_RS26730 () | 55607..55843 | + | 237 | WP_000750964.1 | EexN family lipoprotein | - |
| EC3426_RS26735 () | 55890..56699 | - | 810 | WP_001419737.1 | hypothetical protein | - |
| EC3426_RS26740 () | 56747..57379 | + | 633 | WP_001419736.1 | hypothetical protein | - |
| EC3426_RS26745 () | 57446..57745 | + | 300 | WP_000835763.1 | IncN plasmid KikA protein | - |
| EC3426_RS26750 () | 57748..58983 | + | 1236 | WP_001419735.1 | hypothetical protein | VF |
| EC3426_RS26755 () | 58989..59426 | + | 438 | WP_133963912.1 | type IV pilus biogenesis protein PilM | - |
| EC3426_RS26760 () | 59766..60164 | + | 399 | WP_001708012.1 | hypothetical protein | - |
| EC3426_RS26765 () | 60185..60769 | + | 585 | WP_001401693.1 | Type IV secretion system protein virB1 | VF |
| EC3426_RS26770 () | 60871..61059 | + | 189 | WP_050567133.1 | hypothetical protein | - |
| EC3426_RS26775 () | 61130..61450 | + | 321 | WP_000362081.1 | VirB3 family type IV secretion system protein | - |
| EC3426_RS26780 () | 61456..63814 | + | 2359 | Protein_80 | conjugal transfer protein | - |
| EC3426_RS26790 () | 63977..64687 | + | 711 | Protein_81 | type IV secretion system protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|