MGE detailed information
MGE type: Genomic_island MGE length: 20421 bp
Accession: NZ_LS992180 Location: 4364876..4385296 Organism: Escherichia coli isolate Escherichia coli str. TO124 Replicon: chromosome
Accession: NZ_LS992180 Location: 4364876..4385296 Organism: Escherichia coli isolate Escherichia coli str. TO124 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECTO124_RS21840 () | 4362483..4363208 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| ECTO124_RS21845 () | 4363245..4363784 | - | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| ECTO124_RS21850 () | 4363849..4364397 | - | 549 | WP_000695543.1 | type 1 fimbrial major subunit FimA | - |
| ECTO124_RS21855 () | 4364876..4365472 | - | 597 | WP_000044711.1 | ISKra4 family transposase ISCep1 | VF |
| ECTO124_RS21860 () | 4365950..4366357 | - | 408 | Protein_4192 | type 1 fimbria switch DNA invertase FimB | - |
| ECTO124_RS21865 () | 4366457..4366975 | + | 519 | WP_000115885.1 | hypothetical protein | VF |
| ECTO124_RS21870 () | 4366994..4368214 | + | 1221 | WP_000343765.1 | ISL3 family transposase ISEc53 | Transposase |
| ECTO124_RS21875 () | 4368245..4368442 | - | 198 | Protein_4195 | type 1 fimbria switch DNA invertase FimB | - |
| ECTO124_RS21880 () | 4369896..4370612 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| ECTO124_RS21885 () | 4370632..4371738 | + | 1107 | WP_001295733.1 | N-acetylneuraminate epimerase | - |
| ECTO124_RS21890 () | 4371802..4372782 | + | 981 | WP_000991462.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| ECTO124_RS21895 () | 4373365..4374471 | - | 1107 | Protein_4199 | helicase YjhR | - |
| ECTO124_RS21900 () | 4374534..4375681 | + | 1148 | WP_085949154.1 | IS3 family transposase ISEc52 | Transposase |
| ECTO124_RS21905 () | 4375714..4375878 | + | 165 | Protein_4201 | GNAT family N-acetyltransferase | - |
| ECTO124_RS21910 () | 4376255..4376512 | + | 258 | WP_001054379.1 | YjhX family toxin | Toxin Detail |
| ECTO124_RS21915 () | 4376524..4377075 | + | 552 | WP_000123957.1 | N-acetyltransferase | Antitoxin Detail |
| ECTO124_RS21920 () | 4377127..4377873 | + | 747 | WP_000354249.1 | class I SAM-dependent methyltransferase | - |
| ECTO124_RS21925 () | 4378001..4378261 | + | 261 | WP_000077645.1 | hypothetical protein | - |
| ECTO124_RS27745 () | 4378299..4378415 | + | 117 | Protein_4206 | VOC family protein | - |
| ECTO124_RS21930 () | 4378660..4379781 | + | 1122 | WP_000010833.1 | M42 family metallopeptidase | - |
| ECTO124_RS21935 () | 4379778..4380056 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| ECTO124_RS21940 () | 4380068..4381381 | + | 1314 | WP_000460845.1 | galactitol-specific PTS transporter subunit IIC | - |
| ECTO124_RS21945 () | 4381394..4382200 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| ECTO124_RS21950 () | 4382331..4382762 | + | 432 | WP_000606405.1 | PTS sugar transporter subunit IIA | - |
| ECTO124_RS21955 () | 4382774..4383406 | + | 633 | WP_000600624.1 | ribulose-phosphate 3 epimerase family protein | - |
| ECTO124_RS21960 () | 4383423..4384205 | + | 783 | WP_000082779.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| ECTO124_RS21965 () | 4384508..4385296 | + | 789 | WP_000251799.1 | IclR family transcriptional regulator | - |
| ECTO124_RS21970 () | 4385301..4386206 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| ECTO124_RS21975 () | 4386217..4388184 | + | 1968 | WP_000116325.1 | xylonate dehydratase YjhG | - |
| ECTO124_RS21980 () | 4388291..4389640 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|