MGE detailed information
MGE type: Prophage MGE length: 80313 bp
Accession: NZ_LS992175 Location: 2140241..2220553 Organism: Citrobacter freundii isolate Citrobacter freundii str. E2614 Replicon: chromosome
Accession: NZ_LS992175 Location: 2140241..2220553 Organism: Citrobacter freundii isolate Citrobacter freundii str. E2614 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CFE2614_RS10515 () | 2135733..2136299 | + | 567 | WP_003034677.1 | VOC family protein | - |
| CFE2614_RS10520 () | 2136302..2137048 | + | 747 | WP_044701481.1 | copper homeostasis protein CutC | - |
| CFE2614_RS10525 () | 2137292..2138260 | - | 969 | WP_003839177.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| CFE2614_RS10530 () | 2138257..2139000 | - | 744 | WP_003034686.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| CFE2614_RS10535 () | 2139041..2139436 | - | 396 | WP_003034689.1 | MAPEG family protein | - |
| CFE2614_RS10540 () | 2139489..2140262 | - | 774 | WP_044701478.1 | DUF72 domain-containing protein | - |
| CFE2614_RS10545 () | 2140241..2141554 | - | 1314 | WP_044701477.1 | Putative defective protein IntQ ; Integrase | Integrase |
| CFE2614_RS10550 () | 2141613..2141849 | - | 237 | WP_003034696.1 | excisionase family protein | - |
| CFE2614_RS27360 () | 2141895..2142032 | - | 138 | WP_164845175.1 | hypothetical protein | - |
| CFE2614_RS10560 () | 2142386..2142832 | - | 447 | Protein_2019 | DUF550 domain-containing protein | - |
| CFE2614_RS10565 () | 2142829..2143122 | - | 294 | WP_044701466.1 | hypothetical protein | - |
| CFE2614_RS10570 () | 2143126..2143521 | - | 396 | WP_044701465.1 | hypothetical protein | - |
| CFE2614_RS10575 () | 2143518..2143832 | - | 315 | WP_044701462.1 | hypothetical protein | - |
| CFE2614_RS27460 () | 2143955..2144134 | - | 180 | Protein_2023 | hypothetical protein | - |
| CFE2614_RS10580 () | 2144120..2144392 | - | 273 | Protein_2024 | hypothetical protein | - |
| CFE2614_RS10585 () | 2144376..2145416 | - | 1041 | WP_046155140.1 | chromosome partitioning protein ParB | - |
| CFE2614_RS10590 () | 2145416..2145829 | - | 414 | WP_044703074.1 | hypothetical protein | - |
| CFE2614_RS10600 () | 2146374..2146829 | + | 456 | WP_044702982.1 | hypothetical protein | - |
| CFE2614_RS10610 () | 2147285..2148004 | - | 720 | WP_032140310.1 | helix-turn-helix transcriptional regulator | - |
| CFE2614_RS10615 () | 2148074..2148331 | + | 258 | WP_024195799.1 | helix-turn-helix domain-containing protein | - |
| CFE2614_RS10620 () | 2148363..2148926 | + | 564 | WP_016240141.1 | hypothetical protein | - |
| CFE2614_RS10625 () | 2149102..2149281 | + | 180 | Protein_2031 | DUF4222 domain-containing protein | - |
| CFE2614_RS10630 () | 2149271..2150146 | + | 876 | WP_044702980.1 | conserved phage C-terminal domain-containing protein | - |
| CFE2614_RS10635 () | 2150149..2150970 | + | 822 | WP_044702979.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| CFE2614_RS10640 () | 2150967..2151185 | + | 219 | WP_044702978.1 | hypothetical protein | - |
| CFE2614_RS10645 () | 2151182..2151502 | + | 321 | WP_044702977.1 | LexA family transcriptional regulator | - |
| CFE2614_RS10650 () | 2151499..2151885 | + | 387 | WP_044702975.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CFE2614_RS10655 () | 2151898..2152623 | + | 726 | WP_044702973.1 | DNA-binding protein | - |
| CFE2614_RS10660 () | 2152620..2153609 | + | 990 | WP_046155141.1 | DUF968 domain-containing protein | - |
| CFE2614_RS10665 () | 2153624..2154202 | + | 579 | WP_044703009.1 | DUF1133 family protein | - |
| CFE2614_RS10670 () | 2154799..2155377 | + | 579 | WP_044703006.1 | hypothetical protein | - |
| CFE2614_RS10675 () | 2155477..2155872 | + | 396 | WP_008323296.1 | phage holin family protein | - |
| CFE2614_RS10680 () | 2155859..2156140 | + | 282 | WP_046155109.1 | phage holin family protein | - |
| CFE2614_RS10685 () | 2156140..2156757 | + | 618 | WP_044703002.1 | glycoside hydrolase family 19 protein | - |
| CFE2614_RS10690 () | 2156765..2157034 | + | 270 | WP_047715857.1 | hypothetical protein | - |
| CFE2614_RS10700 () | 2157222..2157515 | + | 294 | WP_080941989.1 | hypothetical protein | - |
| CFE2614_RS10705 () | 2157585..2157821 | + | 237 | WP_044702996.1 | hypothetical protein | - |
| CFE2614_RS10710 () | 2158013..2158537 | + | 525 | WP_044702995.1 | Rha family transcriptional regulator | - |
| CFE2614_RS10715 () | 2158616..2159125 | + | 510 | WP_044703079.1 | hypothetical protein | - |
| CFE2614_RS10720 () | 2159604..2159807 | + | 204 | WP_044703081.1 | hypothetical protein | - |
| CFE2614_RS10725 () | 2159962..2160348 | + | 387 | WP_131401800.1 | IS66 family transposase ISCfr14 | Transposase |
| CFE2614_RS10730 () | 2160348..2160695 | + | 348 | WP_042922210.1 | IS66 family transposase ISEc8 | Transposase |
| CFE2614_RS10735 () | 2160745..2162283 | + | 1539 | WP_042922208.1 | IS66 family transposase ISSgsp1 | Transposase |
| CFE2614_RS10740 () | 2162508..2162996 | + | 489 | WP_044700360.1 | DUF1441 family protein | - |
| CFE2614_RS10745 () | 2162996..2165098 | + | 2103 | WP_044700358.1 | phage terminase large subunit family protein | - |
| CFE2614_RS10750 () | 2165095..2165310 | + | 216 | WP_001082414.1 | hypothetical protein | - |
| CFE2614_RS10755 () | 2165307..2166815 | + | 1509 | WP_044700357.1 | phage portal protein | - |
| CFE2614_RS10760 () | 2166742..2168784 | + | 2043 | WP_171845827.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| CFE2614_RS10765 () | 2168876..2169202 | + | 327 | WP_044700364.1 | DUF2190 family protein | - |
| CFE2614_RS10770 () | 2169195..2169470 | + | 276 | WP_044700354.1 | ATP-binding protein | - |
| CFE2614_RS10775 () | 2169481..2170059 | + | 579 | WP_044700352.1 | phage tail protein | - |
| CFE2614_RS10780 () | 2170056..2170457 | + | 402 | WP_044700350.1 | phage minor tail U family protein | - |
| CFE2614_RS10785 () | 2170467..2171210 | + | 744 | WP_044700348.1 | phage tail protein | - |
| CFE2614_RS10790 () | 2171221..2171652 | + | 432 | WP_044700346.1 | phage minor tail protein G | - |
| CFE2614_RS10795 () | 2171661..2171975 | + | 315 | WP_072052167.1 | phage tail assembly protein T | - |
| CFE2614_RS10800 () | 2171959..2175102 | + | 3144 | WP_044700344.1 | phage tail tape measure protein | - |
| CFE2614_RS10805 () | 2175106..2175453 | + | 348 | WP_044700341.1 | phage tail protein | - |
| CFE2614_RS10810 () | 2175450..2176205 | + | 756 | WP_044700338.1 | phage minor tail protein L | - |
| CFE2614_RS10815 () | 2176207..2176917 | + | 711 | WP_044700337.1 | C40 family peptidase | - |
| CFE2614_RS10820 () | 2176947..2177282 | + | 336 | WP_052739220.1 | hypothetical protein | - |
| CFE2614_RS10825 () | 2177339..2177941 | + | 603 | WP_044700334.1 | tail assembly protein | - |
| CFE2614_RS10830 () | 2177971..2181156 | + | 3186 | WP_044700333.1 | host specificity protein J | - |
| CFE2614_RS10835 () | 2181156..2181470 | + | 315 | WP_044700331.1 | hypothetical protein | - |
| CFE2614_RS10840 () | 2181471..2182145 | + | 675 | WP_046155111.1 | hypothetical protein | - |
| CFE2614_RS10850 () | 2182553..2183626 | + | 1074 | WP_046155112.1 | tail fiber domain-containing protein | - |
| CFE2614_RS10855 () | 2183694..2183936 | - | 243 | WP_038642073.1 | DinI family protein | - |
| CFE2614_RS10860 () | 2184015..2184404 | + | 390 | WP_044700305.1 | DNA polymerase V | - |
| CFE2614_RS10865 () | 2184405..2185073 | - | 669 | WP_044700303.1 | SOS response-associated peptidase | - |
| CFE2614_RS10875 () | 2185396..2185962 | - | 567 | WP_044700301.1 | hydrolase | - |
| CFE2614_RS10880 () | 2186251..2188023 | + | 1773 | WP_003034862.1 | aspartate--tRNA ligase | - |
| CFE2614_RS10885 () | 2188025..2188468 | + | 444 | WP_003034863.1 | dihydroneopterin triphosphate diphosphatase | - |
| CFE2614_RS10890 () | 2188497..2189240 | + | 744 | WP_003034865.1 | putative transcriptional regulatory protein YebC | VF |
| CFE2614_RS10895 () | 2189275..2189796 | + | 522 | WP_003034867.1 | crossover junction endodeoxyribonuclease RuvC | - |
| CFE2614_RS10900 () | 2189877..2190488 | + | 612 | WP_003034869.1 | Holliday junction branch migration protein RuvA | - |
| CFE2614_RS10905 () | 2190497..2191507 | + | 1011 | WP_003034872.1 | Holliday junction branch migration DNA helicase RuvB | - |
| CFE2614_RS10910 () | 2191586..2192371 | - | 786 | WP_003034874.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| CFE2614_RS10915 () | 2192368..2193123 | - | 756 | WP_003034877.1 | Zinc import ATP-binding protein ZnuC | VF |
| CFE2614_RS10920 () | 2193202..2194146 | + | 945 | WP_003841677.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| CFE2614_RS10925 () | 2194162..2195481 | + | 1320 | WP_003034883.1 | murein DD-endopeptidase MepM | - |
| CFE2614_RS10930 () | 2195601..2196572 | + | 972 | WP_032935377.1 | Lipid A biosynthesis myristoyltransferase | VF |
| CFE2614_RS10935 () | 2196617..2198059 | - | 1443 | WP_003034890.1 | pyruvate kinase | - |
| CFE2614_RS10940 () | 2198178..2199047 | - | 870 | WP_003034893.1 | MurR/RpiR family transcriptional regulator | - |
| CFE2614_RS10950 () | 2199415..2200890 | + | 1476 | WP_003034896.1 | glucose-6-phosphate dehydrogenase | - |
| CFE2614_RS10955 () | 2201124..2202935 | + | 1812 | WP_003841668.1 | phosphogluconate dehydratase | - |
| CFE2614_RS10960 () | 2202970..2203611 | + | 642 | WP_003034901.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| CFE2614_RS10965 () | 2203679..2204857 | - | 1179 | WP_044700298.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| CFE2614_RS10970 () | 2204989..2205279 | + | 291 | WP_003034906.1 | DNA damage-inducible protein YebG | - |
| CFE2614_RS10975 () | 2205401..2205754 | + | 354 | WP_003034909.1 | protein YebF | - |
| CFE2614_RS10980 () | 2205849..2206508 | + | 660 | WP_016150461.1 | tellurite resistance TerB family protein | - |
| CFE2614_RS10985 () | 2206595..2208649 | + | 2055 | WP_170864029.1 | oligopeptidase B | - |
| CFE2614_RS10990 () | 2208640..2209302 | - | 663 | WP_003034918.1 | exodeoxyribonuclease X | - |
| CFE2614_RS10995 () | 2209326..2209982 | - | 657 | WP_003841657.1 | carbon-nitrogen hydrolase family protein | - |
| CFE2614_RS11000 () | 2210089..2210319 | - | 231 | WP_003034925.1 | DNA polymerase III subunit theta | - |
| CFE2614_RS11005 () | 2210463..2210837 | + | 375 | WP_003034928.1 | CopC domain-containing protein YobA | - |
| CFE2614_RS11010 () | 2210841..2211713 | + | 873 | WP_003034931.1 | copper homeostasis membrane protein CopD | - |
| CFE2614_RS11015 () | 2211734..2212072 | + | 339 | WP_044700293.1 | YebY family protein | - |
| - () | 2212193..2212336 | - | 144 | - | - | Antitoxin Detail |
| - () | 2212228..2212331 | + | 104 | - | - | Toxin Detail |
| CFE2614_RS11020 () | 2212485..2213126 | + | 642 | WP_003034937.1 | protein-serine/threonine phosphatase | - |
| CFE2614_RS11025 () | 2213127..2213318 | - | 192 | WP_003034941.1 | YebW family protein | - |
| CFE2614_RS11030 () | 2213421..2213657 | - | 237 | WP_029139506.1 | DUF1480 family protein | - |
| CFE2614_RS11035 () | 2213758..2215146 | - | 1389 | WP_044700319.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| CFE2614_RS11040 () | 2215259..2217892 | - | 2634 | WP_003034947.1 | Intermembrane transport protein YebT | VF |
| CFE2614_RS11045 () | 2217861..2219144 | - | 1284 | WP_003841983.1 | membrane integrity lipid transport subunit YebS | - |
| CFE2614_RS11050 () | 2219273..2219770 | + | 498 | WP_003034953.1 | GAF domain-containing protein | - |
| CFE2614_RS11055 () | 2219867..2220553 | + | 687 | WP_003034957.1 | RNA chaperone ProQ | - |
| CFE2614_RS11060 () | 2220573..2222621 | + | 2049 | WP_003034960.1 | carboxy terminal-processing peptidase | - |
| CFE2614_RS11065 () | 2222814..2223695 | + | 882 | WP_003034964.1 | protease HtpX | - |
| CFE2614_RS11070 () | 2223794..2224831 | - | 1038 | WP_127702267.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|