MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 46051 bp
Accession: NZ_LS992170 Location: 1..46051 Organism: Escherichia coli isolate Escherichia coli str. TO60 Replicon: plasmid 3
Accession: NZ_LS992170 Location: 1..46051 Organism: Escherichia coli isolate Escherichia coli str. TO60 Replicon: plasmid 3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECTO60_RS26180 () | 14..388 | + | 375 | WP_000844303.1 | tail-associated lysozyme | - |
| ECTO60_RS26185 () | 385..696 | + | 312 | WP_000627400.1 | hypothetical protein | - |
| ECTO60_RS26190 () | 1000..1131 | + | 132 | WP_001353745.1 | toxin-antitoxin system HicB family antitoxin | - |
| ECTO60_RS26195 () | 1490..1995 | + | 506 | Protein_4 | hypothetical protein | - |
| ECTO60_RS26200 () | 1999..3227 | + | 1229 | Protein_5 | relaxase/mobilization nuclease domain-containing protein | - |
| ECTO60_RS26210 () | 3607..3809 | + | 203 | Protein_6 | EexN family lipoprotein | - |
| ECTO60_RS26215 () | 4165..4784 | + | 620 | Protein_7 | Type IV secretion system protein virB1 | VF |
| ECTO60_RS26220 () | 4852..5124 | + | 273 | WP_001353733.1 | Type IV secretion system protein virB2 | VF |
| ECTO60_RS26225 () | 5143..7890 | + | 2748 | WP_016231857.1 | Type IV secretion system protein virB4 | VF |
| ECTO60_RS26230 () | 7902..8618 | + | 717 | WP_000832283.1 | type IV secretion system VirB5 protein | - |
| ECTO60_RS26235 () | 8630..9724 | + | 1095 | WP_000046889.1 | type IV secretion system protein | - |
| ECTO60_RS26255 () | 10239..10925 | + | 687 | WP_001290765.1 | Type IV secretion system protein virB8 | VF |
| ECTO60_RS26260 () | 10922..11830 | + | 909 | WP_001329500.1 | Type IV secretion system protein virB9 | VF |
| ECTO60_RS26265 () | 11823..12932 | + | 1110 | WP_134163305.1 | Type IV secretion system protein virB10 | VF |
| ECTO60_RS26270 () | 12934..13962 | + | 1029 | WP_001014668.1 | Type IV secretion system protein VirB11 | VF |
| ECTO60_RS26275 () | 13949..15811 | + | 1863 | WP_000847107.1 | type IV secretory system conjugative DNA transfer family protein | - |
| ECTO60_RS26280 () | 15823..16242 | + | 420 | WP_000737409.1 | hypothetical protein | - |
| ECTO60_RS26285 () | 16226..16531 | + | 306 | WP_000147047.1 | IncN plasmid KikA protein | - |
| ECTO60_RS26290 () | 16586..16810 | + | 225 | WP_021536788.1 | hypothetical protein | - |
| ECTO60_RS26295 () | 16913..17221 | + | 309 | WP_000647576.1 | hypothetical protein | - |
| ECTO60_RS26300 () | 17218..17712 | + | 495 | WP_001215682.1 | thermonuclease family protein | - |
| ECTO60_RS26305 () | 17728..18132 | + | 405 | WP_001218539.1 | hypothetical protein | - |
| ECTO60_RS26310 () | 18192..18512 | + | 321 | WP_001020837.1 | hypothetical protein | - |
| ECTO60_RS26315 () | 18539..19126 | + | 588 | WP_000275457.1 | hypothetical protein | - |
| ECTO60_RS26320 () | 19138..21291 | + | 2154 | WP_001235750.1 | type IA DNA topoisomerase | - |
| ECTO60_RS26325 () | 21288..21494 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| ECTO60_RS26330 () | 21510..21974 | + | 465 | WP_001293141.1 | H-NS histone family protein | - |
| ECTO60_RS26335 () | 22078..22734 | + | 657 | WP_000972912.1 | hypothetical protein | - |
| ECTO60_RS26655 () | 22754..23065 | + | 312 | WP_023157208.1 | hypothetical protein | - |
| ECTO60_RS26345 () | 23627..24451 | + | 825 | WP_001353741.1 | Tyrosine recombinase XerD | VF |
| ECTO60_RS26350 () | 24556..25215 | + | 660 | WP_000516222.1 | hypothetical protein | VF |
| ECTO60_RS26355 () | 25309..25611 | + | 303 | WP_001096507.1 | hypothetical protein | - |
| ECTO60_RS26360 () | 25647..25898 | + | 252 | WP_000928750.1 | hypothetical protein | - |
| ECTO60_RS26375 () | 26482..27009 | - | 528 | WP_000577043.1 | DUF2726 domain-containing protein | - |
| ECTO60_RS26380 () | 27144..27548 | - | 405 | WP_012421203.1 | hypothetical protein | - |
| ECTO60_RS26385 () | 27561..28427 | - | 867 | WP_001353743.1 | replication initiation protein | - |
| ECTO60_RS26390 () | 29682..30017 | + | 336 | WP_001147119.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| ECTO60_RS26395 () | 30014..30364 | + | 351 | WP_000127482.1 | addiction module antitoxin | - |
| ECTO60_RS26400 () | 31004..31519 | + | 516 | WP_001025395.1 | J domain-containing protein | - |
| ECTO60_RS26405 () | 31624..32166 | + | 543 | WP_001083906.1 | hypothetical protein | - |
| ECTO60_RS26410 () | 32163..32414 | + | 252 | WP_001230707.1 | hypothetical protein | Toxin Detail |
| ECTO60_RS26415 () | 32401..32628 | + | 228 | WP_000801440.1 | hypothetical protein | Antitoxin Detail |
| ECTO60_RS26425 () | 33082..33381 | + | 300 | WP_000650311.1 | hypothetical protein | - |
| ECTO60_RS26430 () | 33391..33807 | + | 417 | WP_012421208.1 | tail-associated lysozyme | - |
| ECTO60_RS26435 () | 33804..34115 | + | 312 | WP_000627400.1 | hypothetical protein | - |
| ECTO60_RS26440 () | 34420..34551 | + | 132 | WP_001353745.1 | toxin-antitoxin system HicB family antitoxin | - |
| ECTO60_RS26450 () | 34912..35415 | + | 504 | WP_000781814.1 | hypothetical protein | - |
| ECTO60_RS26455 () | 35419..36648 | + | 1230 | WP_000539543.1 | hypothetical protein | Relaxase |
| ECTO60_RS26460 () | 36725..37018 | + | 294 | WP_000134733.1 | LuxR family transcriptional regulator | - |
| ECTO60_RS26465 () | 37015..37230 | + | 216 | WP_000760375.1 | EexN family lipoprotein | - |
| ECTO60_RS26470 () | 37587..38207 | + | 621 | WP_000157549.1 | Type IV secretion system protein virB1 | VF |
| ECTO60_RS26475 () | 38275..38547 | + | 273 | WP_001353733.1 | Type IV secretion system protein virB2 | VF |
| ECTO60_RS26480 () | 38566..41313 | + | 2748 | WP_016231857.1 | Type IV secretion system protein virB4 | VF |
| ECTO60_RS26485 () | 41325..42041 | + | 717 | WP_000832283.1 | type IV secretion system VirB5 protein | - |
| ECTO60_RS26490 () | 42053..43147 | + | 1095 | WP_000046889.1 | type IV secretion system protein | - |
| ECTO60_RS26510 () | 43662..44349 | + | 688 | Protein_56 | type IV secretion system protein | - |
| ECTO60_RS26515 () | 44346..45245 | + | 900 | Protein_57 | Type IV secretion system protein virB9 | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|